Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00380 ATGTCGTCAACCTTCAGCGGCGATGAAACGGCGCCCTTCTTTGGCTTTCTAGGCGCCGCTGCGGCCCTCGTCTTCTCCTGTATGGGAGCCGCTTATGGGACGGCAAAGAGCGGTGTTGGAGTTGCGTCGATGGGAGTGATGAGACCGGAATTGGTGATGAAGTCGATTGTTCCGGTGGTTATGGCGGGAGTTTTGGGTATTTATGGTTTGATTATTGCTGTGATTATTAGTACTGGGATTAACCCTAAGGCTAAATCTTATTACCTCTTCGATGGCTACGCGCATTTGTCCTCTGGTCTGGCTTGTGGTCTCGCCGGTCTCTCTGCTGGCATGGCTATCGGGATCGTCGGCGATGCCGGCGTTAGGTACTTTTCTTTAATCCGTTACTCTGAATTGTAG 399 51.63 MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRYFSLIRYSEL 132
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2456073 2456685 + Cp4.1LG07g03860.1 Cpe07g00380 472187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00380 132 Gene3D - 11 126 IPR035921 -
Cpe07g00380 132 SUPERFAMILY F1F0 ATP synthase subunit C 13 77 IPR035921 -
Cpe07g00380 132 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 3 122 - -
Cpe07g00380 132 SUPERFAMILY F1F0 ATP synthase subunit C 87 122 IPR035921 -
Cpe07g00380 132 TIGRFAM V_ATP_synt_C: V-type ATPase, C subunit 13 121 IPR011555 GO:0033179|GO:0046961|GO:1902600
Cpe07g00380 132 Pfam ATP synthase subunit C 17 76 IPR002379 GO:0015078|GO:0033177|GO:1902600
Cpe07g00380 132 PRINTS Vacuolar ATP synthase 16kDa subunit signature 56 80 IPR000245 GO:0033179|GO:0046961|GO:1902600
Cpe07g00380 132 PRINTS Vacuolar ATP synthase 16kDa subunit signature 30 54 IPR000245 GO:0033179|GO:0046961|GO:1902600
Cpe07g00380 132 PRINTS Vacuolar ATP synthase 16kDa subunit signature 107 132 IPR000245 GO:0033179|GO:0046961|GO:1902600
Cpe07g00380 132 PANTHER V-TYPE PROTON ATPASE SUBUNIT C3 3 122 - -
Cpe07g00380 132 CDD ATP-synt_Vo_c_ATP6C_rpt1 13 80 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00380 Cpe11g00238 CCT
Cpe07g00380 Cpe11g00238 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00380 Cpe-Chr7:2456073 Cpe11g00238 Cpe-Chr11:1288221 2.24E-81 dispersed
Cpe07g00379 Cpe-Chr7:2450787 Cpe07g00380 Cpe-Chr7:2456073 2.81E-81 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00380 K02155 - csin:114292490 219.935