Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00387 ATGGATCTACTGCGATCGGAGCCGATGCAGTTTGTGCAGCTGATCGTTCCTAATGAATCGGTGCACCGGACGGTTTCCTATCTCGGCGACCTCGGTCTCTTCCAATTCAACGATCTCAATGCATCTAGAAGTCCATTCCAGCGAACGTATGCTGCTCAGATTAAAAGATGTGGGGAAATGGCTCGCAAGCTAAGGTTTTTCAGGGAGCAAATGGCAAGGGCTGGTTTATCTCCGTCATCAAATTCTCTAGCGGTTGCTGATTTTGATCTGGATAATTTGGAGGTTAAACTTGGAGAATTTGAGGCAGAATTGTTAGAGATAAATGGCAACAATGAGAAGTTACGACGCAATTATAGTGAGCTGTTGGAATATAAGCTTGTACTTCAGAAGGTTGGGGAGTTTTTCCATCTAGCTCAAAGCATAGCTGCAGCTCAGCAAAGAGAACTGGAAGTGCAACAAAACGGGGAAGGGTCCATCGACAGTCCTTTACTATTGGAACAAGAAATGACAACGGATTCAACGAAACAAGTTAAGCTAGGTTATATCAGTGGTCTAGTTCTGAGAGAAAAGTCAATGGCTTTTGAAAGGATTTTGTTCCGTTCAACTAGGGGCAATGTGTATCTAAGGCAAGCTGTGGTTGATGGTTCCGTCACTGATCCTGTATCTGGGGAGAAGGTCGAGAAAAATGTGTTTGTCATATTTTATTCCGGAGAGAGAGCAAAGAATAAAATTCTGAAAATAAGCGAAGCTTTTGGCGCAAACCGTTATCCATTCACTGATGACTTGGGCAAACAACTTCAGATGATTACAGAGGTGTCTGGAAAACTCTCTGAATTGAAGACTACCATTGATTTGGGGCAAGTGCACCGAAGTAAACTCTTGCAGATGATTGGCCATCAATACGAGCAGTGGAATCTTTTGGTAAAGAAGGAAAAGTCTGTTTACCACACTTTGAATATGCTCAGTGTTGACGTAACAAAGAAATGCCTTGTAGGTGAAGGTTGGTGTCCTGTTTTTGCAACAAATCAGATTCAAAATGTGATCCAGAAGGCTACCTTTGACAGCAAATCACAGATTGAGGCTATCTTTCATGTTCTGCAAACGAAGGAAGCACCACCAACATATTTCCGCACAAACAAATTTACTTCTACATTTCAAGAAATTGTGGATGCATATGGGATTGCTAAGTATCAGGAAGCAAATCCTGGGGTCTACACGATTGTCACCTTTCCGTTCCTTTTTGCTGTAATGTTCGGAGATTGGGGCCATGGAATATGCTTGTTGCTGGCAACATTATATCTTATAATAAGGGAGAAGAAATTTTCCAGCCAGAAACTTGGAGATATCGTGGAAATGACTTTTGCGGGCCGTTATGTTATCATGATGATGGCACTTTTTTCAATCTACACAGGACTGATTTATAATGAATTTTTTTCTGTCCCATTTGAATTGTTTGGGCCTTCTGCATATGGTTGTCGTCATACTTCATGCAGGTACCAATTTGTTCCGCAGATGATATTCTTGAACAGCTTATTCGGCTACCTCTCGCTTCTCATAATTGTAAAATGGTGCTCTGGATCTCAAGCTGATCTGTATCACGTAATGATATATATGTTCTTGAGTCCTACAGATGATCTAGGTGAAAATGAGCTTTTTCCAGGACAGCAGTTTGTTCAGGTTCTTTTACTTTTGGCTGCCCTCACTGCCGTGCCATGGATGCTGCTTCCGAAGCCTTTTCTGTTGAGGAAACAGAATGCAGAAAGGCACCAAGGTCGATCCTACTCCCTACTTCACGGCACGGATGACAATCTTGAAACAAAACAGCACCACAGTTCCCCCAGCCACGATGACTTTGACTTCAGCGAGGTCTTTGTACACCAACTTATACATACCATAGAGTTCGTACTTGGTGCAGTTTCTAACACAGCATCTTATCTACGTCTATGGGCCCTCAGCCTAGCCCATTCGGAGTTGTCGAGCGTATTTTACGACAAGGTTCTACTCCTAGCTTGGGGGTTCGACAGTTGGAGCATCCGAATAATAGGAATAGCAGTTTTTATATGTGCAACTGTGGGAGTTTTACTAGTGATGGAAACTCTGAGCGCATTCCTACACGCTTTGAGGCTCCACTGGGTGGAGTTTCAGAACAAATTCTATGCAGGAGATGGATTCAAATTTTCCCCTTACTCCTTTTCTCTGCTTCGGGAGGAGGATGAGTGA 2220 42.93 MDLLRSEPMQFVQLIVPNESVHRTVSYLGDLGLFQFNDLNASRSPFQRTYAAQIKRCGEMARKLRFFREQMARAGLSPSSNSLAVADFDLDNLEVKLGEFEAELLEINGNNEKLRRNYSELLEYKLVLQKVGEFFHLAQSIAAAQQRELEVQQNGEGSIDSPLLLEQEMTTDSTKQVKLGYISGLVLREKSMAFERILFRSTRGNVYLRQAVVDGSVTDPVSGEKVEKNVFVIFYSGERAKNKILKISEAFGANRYPFTDDLGKQLQMITEVSGKLSELKTTIDLGQVHRSKLLQMIGHQYEQWNLLVKKEKSVYHTLNMLSVDVTKKCLVGEGWCPVFATNQIQNVIQKATFDSKSQIEAIFHVLQTKEAPPTYFRTNKFTSTFQEIVDAYGIAKYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLATLYLIIREKKFSSQKLGDIVEMTFAGRYVIMMMALFSIYTGLIYNEFFSVPFELFGPSAYGCRHTSCRYQFVPQMIFLNSLFGYLSLLIIVKWCSGSQADLYHVMIYMFLSPTDDLGENELFPGQQFVQVLLLLAALTAVPWMLLPKPFLLRKQNAERHQGRSYSLLHGTDDNLETKQHHSSPSHDDFDFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFDSWSIRIIGIAVFICATVGVLLVMETLSAFLHALRLHWVEFQNKFYAGDGFKFSPYSFSLLREEDE 739
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2501426 2511652 + Cp4.1LG07g03840.1 Cpe07g00387 472194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00387 739 Coils Coil 90 117 - -
Cpe07g00387 739 PIRSF ATP6V0A1 1 498 IPR026028 GO:0000220|GO:0046961
Cpe07g00387 739 PIRSF ATP6V0A1 493 739 IPR026028 GO:0000220|GO:0046961
Cpe07g00387 739 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 497 739 - -
Cpe07g00387 739 PANTHER VACUOLAR PROTON ATPASES 1 495 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cpe07g00387 739 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 1 495 - -
Cpe07g00387 739 Pfam V-type ATPase 116kDa subunit family 27 493 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cpe07g00387 739 Pfam V-type ATPase 116kDa subunit family 498 731 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cpe07g00387 739 PANTHER VACUOLAR PROTON ATPASES 497 739 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00387 Cpe11g00231 CCT
Cpe07g00387 Cpe11g00231 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00387 Cpe-Chr7:2501426 Cpe16g00562 Cpe-Chr16:6414568 0 dispersed
Cpe11g00231 Cpe-Chr11:1241860 Cpe07g00387 Cpe-Chr7:2501426 8.03E-09 wgd
Cpe15g00555 Cpe-Chr15:6387031 Cpe07g00387 Cpe-Chr7:2501426 5.44E-121 wgd
Cpe04g00112 Cpe-Chr4:997971 Cpe07g00387 Cpe-Chr7:2501426 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00387 K02154 - csv:101209817 1246.11