Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00390 ATGGCGGACACGGGCTCGGTCTCGAACAAGAGAATGTCGTGTTCGATCCCCGAGAGGTTCCAGCTCCACGCCGCCATGTTAGCCTTACAATTCGGCTACGCCGGCTTCCATGTCGTCTCTAGAGCTGCCCTGAATATGGGCATTAGTAAACTCGTCTTTCCTGTCTATCGAAACGTCATCGCTTTGATCCTCCTCCTTCCCTTTGCATATTTCATGGAAAAGAAGGATAGGCCTGCGCTTACTCTCAACTTTGTTCTTCAGTTCTTCCTCCTCGCTCTCGTTGGAATTACTGCAAATCAAGGGTTTTACCTGTTGGGTTTGGATAATACTTCCCCAACCTTTGCTTCTGCTATTCAGAATTCTGTCCCTGCCATTACTTTCCTCATGGCTGTTCTTCTCCGGATAGAACAAGTTCGACTAAAGCGGAAAGATGGCATAGCGAAGGTGGTAGGGACTCTATGCTGCGTGGCCGGAGCGACGGTGATCACATTATACAAAGGCCCCGCTGTCTACAGCCCGGCGACGACAATAACGGTGCAGAGCACGGCGGGGAAGCTGATGGGGCCGGGAATGTTCCCGTCACTAGGCGACGCAAAGGGCAAAAGCTGGACGTTAGGGTGCGTGTACTTGTTCGGACACTGCTTGTCGTGGTCGGCGTGGCTGGTTCTACAAGCTCCGGTGCTGAAAAAGTACCCAGCTCGACTCTCCGTCACGTCATTCACTTGCTTTTTTGGCCTCGTCCAATTCTTCATCATCGCTACCGCGTTCGAGCGCGATGCTCAGGCTTGGCTCTTCCACTCCGACGCCGAAGCCTTCAGCATTACCTTCGTGGTTGCTCTCATGGCTTCCTTCGCTTTGGGTGAAGAGTTTTACTTGGGAGGGATCATAGGGGCGGTGCTAATTATATCGGGACTATACCTTGTGCTGTGGGGCAAGAGCGAAGAGAAGAAGCTCTTATTGGAATGGGCAGTAATCCAGTCTACTCCGGACCATGTTACCAGCAGAACAAGCGGCCACATCAAGCCGTCTCTTAACCAGCCACTCCTGCATCCTACGGCTGAAAATGTT 1068 52.25 MADTGSVSNKRMSCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALILLLPFAYFMEKKDRPALTLNFVLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAVLLRIEQVRLKRKDGIAKVVGTLCCVAGATVITLYKGPAVYSPATTITVQSTAGKLMGPGMFPSLGDAKGKSWTLGCVYLFGHCLSWSAWLVLQAPVLKKYPARLSVTSFTCFFGLVQFFIIATAFERDAQAWLFHSDAEAFSITFVVALMASFALGEEFYLGGIIGAVLIISGLYLVLWGKSEEKKLLLEWAVIQSTPDHVTSRTSGHIKPSLNQPLLHPTAENV 356
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2529138 2532175 + Cp4.1LG07g03830.1 Cpe07g00390 472197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00390 356 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Cpe07g00390 356 PANTHER WAT1-RELATED PROTEIN 14 276 IPR030184 GO:0016021|GO:0022857
Cpe07g00390 356 Pfam EamA-like transporter family 26 163 IPR000620 GO:0016020|GO:0016021
Cpe07g00390 356 PANTHER WAT1-RELATED PROTEIN 275 333 - -
Cpe07g00390 356 MobiDBLite consensus disorder prediction 334 356 - -
Cpe07g00390 356 PANTHER WAT1-RELATED PROTEIN 14 276 - -
Cpe07g00390 356 PANTHER WAT1-RELATED PROTEIN 275 333 IPR030184 GO:0016021|GO:0022857
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00390 Cpe11g00228 CCT
Cpe07g00390 Cpe11g00228 ECH
Cpe06g00085 Cpe07g00390 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00390 Cpe-Chr7:2529138 Cpe08g01338 Cpe-Chr8:9650478 5.06E-59 dispersed
Cpe14g00009 Cpe-Chr14:61945 Cpe07g00390 Cpe-Chr7:2529138 4.95E-46 dispersed
Cpe04g01387 Cpe-Chr4:11222436 Cpe07g00390 Cpe-Chr7:2529138 9.01E-109 transposed
Cpe06g00603 Cpe-Chr6:3715739 Cpe07g00390 Cpe-Chr7:2529138 6.61E-59 transposed
Cpe11g00228 Cpe-Chr11:1217523 Cpe07g00390 Cpe-Chr7:2529138 0 wgd
Cpe06g00085 Cpe-Chr6:424900 Cpe07g00390 Cpe-Chr7:2529138 3.38E-129 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00390 - - csv:101210562 612.838