Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00391 ATGGGTATTAGCATGTTTCGTGCTGGATTTTCTGTTCTTGTAATTTTGGGTTTTGTAGTGTGCGATTTGGGCGTTTGTAATGGCGGATTCACGAGCGGTTACGTTAGGAATGACTATGTGGCGTCGGATATGCCGTTCGATAGCGATGTGTTCAAGCCTCCTCCTGGTAGAAATGCCGCACAACAGGGAAAGAGTGTAATTATCTCATGGGTTACACCGGAGAAACCTGGTTCAAACAGAGTGGTTTATTGGGCTGAAAACAGTCCGATTAGAAACAAAGCTGAAGGCTCTGTTGTTTCCTATAAGTACTTCAACTATACATCTGGTTTCATTCACCACTGCACTATTGAGAATTTAGAGTACGACACGAAATACTTCTATGTGATCGGGTTCGGAAGAGATCTTGGCCAAACATATGATTCTAATAAAACACTTACACATTATGAATCAAACCCAACAAAAGGACAGGCTATGTTGTTCGTCGGGGACCTGTCGTATGCAGACCGTTATCCCTTCCATGACAACACCAGGTGGGACACATGGGGGAGGTTCGTAGAAAGAAGTGCAGCTTATCAACCTTGGATTTGGACTGCAGGGAATCATGAACTCGACTATGCTCCTGACATTGGTGAAACCGAACCGTTTAAGCCTTTTTTGCATCGCTACCGTGTCCCGTATAATGCATTGGATGGCTCGTCTCCGCTTTGGTACTCCATTAAGAGAGCTTCTGCTCATATAATTGTCTTGTCCTCTTACTCATCTTATGTGAAAAGCAGCCCCCAATACAAATGGCTGGAGAGTGAGCTGCTAAGGGTAAACAGGGACCAGACTCCGTGGCTCATAGTTCTTATGCATACTCCAATGTACAGCAGTTATGTTCACCATTACATGGAGGGAGAAAGCATGAGAGTGGTCTTCGAGCCATGGTTCGTGAATTATAAAGTTGATGTTGTCTTTGCGGGTCACGTTCATGCCTACGAACGATCTGAACGAGTATCAAATATAGCATACAACATTGTAAATGGGTTATGTTCCCCAATTCGTAACCAAGATGCTCCAGTTTACATAACCATTGGAGATGGAGGAAACTCAGAAGGATTAGTAACAGAGATGACAGAACCACAGCCAAGATACTCAGCTTACCGTGAAGCCAGCTTCGGCCATGCCACACTGGACATAAAGAACAGAACTCACGCCTACTTCGCTTGGCATCGCAACCAAGATGAATATTCTGTGGAAGCTGATGCCCTATGGCTGCACAATCGTCAATGGATAGCTTCAAAATTGGCAAAATCTGCTCCGGTGAGTCACCTTTCATCAGCTGCCTGA 1329 44.77 MGISMFRAGFSVLVILGFVVCDLGVCNGGFTSGYVRNDYVASDMPFDSDVFKPPPGRNAAQQGKSVIISWVTPEKPGSNRVVYWAENSPIRNKAEGSVVSYKYFNYTSGFIHHCTIENLEYDTKYFYVIGFGRDLGQTYDSNKTLTHYESNPTKGQAMLFVGDLSYADRYPFHDNTRWDTWGRFVERSAAYQPWIWTAGNHELDYAPDIGETEPFKPFLHRYRVPYNALDGSSPLWYSIKRASAHIIVLSSYSSYVKSSPQYKWLESELLRVNRDQTPWLIVLMHTPMYSSYVHHYMEGESMRVVFEPWFVNYKVDVVFAGHVHAYERSERVSNIAYNIVNGLCSPIRNQDAPVYITIGDGGNSEGLVTEMTEPQPRYSAYREASFGHATLDIKNRTHAYFAWHRNQDEYSVEADALWLHNRQWIASKLAKSAPVSHLSSAA 442
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2533218 2538440 + Cp4.1LG07g03950.1 Cpe07g00391 472198

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00391 442 Gene3D - 123 430 IPR029052 -
Cpe07g00391 442 PANTHER FE(3+)-ZN(2+) PURPLE ACID PHOSPHATASE 12 10 132 - -
Cpe07g00391 442 SUPERFAMILY Purple acid phosphatase, N-terminal domain 43 134 IPR008963 GO:0003993|GO:0046872
Cpe07g00391 442 PANTHER FE(3+)-ZN(2+) PURPLE ACID PHOSPHATASE 12 134 429 - -
Cpe07g00391 442 PANTHER ACID PHOSPHATASE RELATED 134 429 IPR039331 GO:0003993
Cpe07g00391 442 Pfam Purple acid Phosphatase, N-terminal domain 62 133 IPR015914 GO:0003993|GO:0046872
Cpe07g00391 442 SUPERFAMILY Metallo-dependent phosphatases 151 425 IPR029052 -
Cpe07g00391 442 CDD MPP_PAPs 126 421 IPR041792 -
Cpe07g00391 442 Pfam Calcineurin-like phosphoesterase 136 326 IPR004843 GO:0016787
Cpe07g00391 442 PANTHER ACID PHOSPHATASE RELATED 10 132 IPR039331 GO:0003993
Cpe07g00391 442 Pfam Iron/zinc purple acid phosphatase-like protein C 352 412 IPR025733 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00391 K22390 ACP7; acid phosphatase type 7 - csv:101210805 781.171
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00391 Cpe-Chr7:2533218 Cpe18g00523 Cpe-Chr18:5921942 1.07E-163 dispersed
Cpe10g00644 Cpe-Chr10:3707795 Cpe07g00391 Cpe-Chr7:2533218 0 wgd
Cpe19g00835 Cpe-Chr19:6213233 Cpe07g00391 Cpe-Chr7:2533218 0 wgd
Cpe04g00114 Cpe-Chr4:1019418 Cpe07g00391 Cpe-Chr7:2533218 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g1025 . . . . . . . . . Cmo12g00387 . . . Car12g00413 . . Cpe07g00391 . . . . . . . . . . . . . . . . Cone17ag1369 . . . . Cme03g01915 . . . . . . . . . . . Cma12g00436 . . . . . . . . . . . . . . . . . . . . Csa02g02096 Chy03g01418 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000712 2 3 4 4 1 3 4 3 3 3 3 3 3 3 3 3 3 5 4 3 4 3 3 3 3 3 3 4 3 5 97
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Cpe07g00391 Cpe_Chr07 FPKM 0.0 0.0 0.804046 0.42682 22.076223 23.168306 20.02891 0.23336 0.0 0.0