Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00399 ATGGCTACGCCAGTTGAGCCTCCAAATGGGGTTAGATCCCAAGGGAAGCATTACTATTCAATGTGGCAAACCTTATTTGAGATTGATACTAAATATGTACCCATTAAGCCTATTGGTCGAGGGGCATATGGTATTGTGTGTTCTTCTGTGAATAGGGAAACGAACGAGAAAGTTGCGATAAAGAGAATACATAATGCGTTTGAGAATCGTATCGATGCGCTTCGAACTTTGCGTGAATTGAAGCTTCTTAGGCATCTTCGTCACGAAAACGTTATATGTTTGAAAGATGTGATGATGCCTATTCATAGAAGAAGTTTTAAAGATGTTTATTTGGTTTATGAACTTATGGATACGGATCTTCATCAGATTATTAAGTCCTCTCAGACTCTTACCAATGATCACTGCCAATATTTTCTCTTTCAGTTAATGACAATTAGCTATTTCCAATGTGCTTGCATAGTTGAATTTCTTTATTCACTGGACACTTTGCTTCCCGCTAATTCGAACCTCTTAGTGCAGTTGCTCAGAGGATTGAAGTATCTGCACTCTGCAAACATCCTACATCGAGACTTGAAGCCTGGGAACCTCCTTGTCAATGCAAATTGTGACCTCAAGATATGTGATTTCGGGTTAGCCCGTACGAGCAACGGCAAGAATCAATTCATGACAGAGTATGTCGTTACTCGCTGGTACCGAGCCCCAGAATTGCTTCTCTGCTGTGAGAATTACGGGACATCGATCGATGTGTGGTCTGTAGGATGTATCTTTGCCGAGCTTCTTGGTAGGAAGCCTATCTTCCCAGGTACTGAATGTTTGAATCAACTCAAACTGATAATTAACATACTGGGTAGCCAAAGAGAGGAAGATCTCGAGTTTATAGACAATCCAAAGGCAAGGAGGTACATAAAATCCCTCCAGTACTCTCCCGGGGCTCCGCTTTCCCGTCTTTATCCAAACGCTCATCCTCTTGCAATCGATCTGCTACAAAAGATGCTTGTCTTTGACCCATCAAAGAGGATCAGTGTAACTGAAGCATTGCAACATCCTTACATGTCTCCACTGTATGATCCAAACAGCAACCCTCCAGCTCAGGTACCGATCGACCTCGACATAGATGAGGAACTTGGAGAAGAAATGATACGAGAGATGATGTGGAAGGAAATGCTTCATTACCATCCCGAAGGTCTGGAAGAGCACGCAGAAATGAAATGTTTCCACCCCGAACCTACTACGAGTAGTGCCGTGGTGTTTTCGTGA 1257 42.88 MATPVEPPNGVRSQGKHYYSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKRIHNAFENRIDALRTLRELKLLRHLRHENVICLKDVMMPIHRRSFKDVYLVYELMDTDLHQIIKSSQTLTNDHCQYFLFQLMTISYFQCACIVEFLYSLDTLLPANSNLLVQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDFGLARTSNGKNQFMTEYVVTRWYRAPELLLCCENYGTSIDVWSVGCIFAELLGRKPIFPGTECLNQLKLIINILGSQREEDLEFIDNPKARRYIKSLQYSPGAPLSRLYPNAHPLAIDLLQKMLVFDPSKRISVTEALQHPYMSPLYDPNSNPPAQVPIDLDIDEELGEEMIREMMWKEMLHYHPEGLEEHAEMKCFHPEPTTSSAVVFS 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2586999 2590886 - Cp4.1LG07g04020.1 Cpe07g00399 472206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00399 418 Gene3D Phosphorylase Kinase; domain 1 373 394 - -
Cpe07g00399 418 Gene3D Phosphorylase Kinase; domain 1 12 153 - -
Cpe07g00399 418 SUPERFAMILY Protein kinase-like (PK-like) 19 390 IPR011009 -
Cpe07g00399 418 CDD STKc_TEY_MAPK 26 393 - -
Cpe07g00399 418 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 170 398 - -
Cpe07g00399 418 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 153 - -
Cpe07g00399 418 ProSiteProfiles Protein kinase domain profile. 32 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00399 418 SMART serkin_6 32 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00399 418 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 170 398 - -
Cpe07g00399 418 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 153 - -
Cpe07g00399 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 186 198 IPR008271 GO:0004672|GO:0006468
Cpe07g00399 418 ProSitePatterns Protein kinases ATP-binding region signature. 38 61 IPR017441 GO:0005524
Cpe07g00399 418 Gene3D Transferase(Phosphotransferase) domain 1 169 372 - -
Cpe07g00399 418 Pfam Protein kinase domain 169 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00399 418 Pfam Protein kinase domain 33 143 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00399 Cpe11g00217 CCT
Cpe07g00399 Cpe11g00217 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00399 Cpe-Chr7:2586999 Cpe14g00538 Cpe-Chr14:3395247 0 dispersed
Cpe11g00217 Cpe-Chr11:1168178 Cpe07g00399 Cpe-Chr7:2586999 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62499 PF00069 Pkinase 1.90E-47 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00399 K20535 - csv:101213478 742.265