Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00452 ATGTTCACCTCCTCCCATCCCACCACTCCTCCTCCCCTCCCGGACCTCTCCTTGCACATAAGCCCGCCGTCAAATTCCGGCAGCACCGGCAGCGATCTCAGCCATGAAACTGCCACCGCCGCCGCTGGCTATTTTCTTCCACCTAAACCCCATATGGGTCTACCTCTTGAGCTTGAAACAAGCTTCAACAATGGCCGCCATTTTAACCACCACCTACCTCAAATCTATGGCCGCCATTTTAAAAGAGCTGCAAAAATGGGTATTAGAGCTCCAAGAATGAGATGGACTACAACGCTTCATGCTCATTTTGTCCACGCCGTTCAGCTGCTTGGCGGCCATGAAAGGGCAACACCAAAATCTGTTTTGGAGCTTATGAATGTCAAGGATCTAACCCTAGCTCATGTAAAGAGTCATTTACAGATGTATAGAACAGTGAAAAGCACTGACAAATCAACTGCCTTGAAGAACCAAAGACAAGAAGTTGATCCAAGTGGTGCTGAGATCTCTAACCCTATGTGGAAAAGCTCTGATCAAATGAACTTGTTCTGTTCATCAATGGAGACAAATCAAGAGATGACGACGAGATGGAGTCAACATTACAACAACAACAACAATATTGGAAACAACCAGCAACAGCAACAGCAACAACAGCTGGACCGACACAAAGCGAGCATCGAAATCTCGAGCGGCGTGAAGAAGCAGAGGTTGGAAGGTAGCTGCTTGTCGTTGTGTGATCATCATCATGGCGGTGTGTATCATACAAATATTAATAAGCTAAACTTAGATATCACTCTTGGATGCCCAAATGCTCTTACAATTGAGTCTAATACTCACTCTTCATCTTCTGAACCTCCCCTTCTTAAATGCTAA 870 45.63 MFTSSHPTTPPPLPDLSLHISPPSNSGSTGSDLSHETATAAAGYFLPPKPHMGLPLELETSFNNGRHFNHHLPQIYGRHFKRAAKMGIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKSTALKNQRQEVDPSGAEISNPMWKSSDQMNLFCSSMETNQEMTTRWSQHYNNNNNIGNNQQQQQQQQLDRHKASIEISSGVKKQRLEGSCLSLCDHHHGGVYHTNINKLNLDITLGCPNALTIESNTHSSSSEPPLLKC 289
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2891447 2893150 - Cp4.1LG07g04670.1 Cpe07g00452 472259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00452 289 MobiDBLite consensus disorder prediction 198 222 - -
Cpe07g00452 289 SUPERFAMILY Homeodomain-like 88 145 IPR009057 -
Cpe07g00452 289 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 10 271 IPR044847 GO:0000976|GO:0006355|GO:0010158
Cpe07g00452 289 MobiDBLite consensus disorder prediction 19 34 - -
Cpe07g00452 289 MobiDBLite consensus disorder prediction 150 170 - -
Cpe07g00452 289 Gene3D - 90 147 - -
Cpe07g00452 289 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 91 144 IPR006447 GO:0003677
Cpe07g00452 289 MobiDBLite consensus disorder prediction 1 34 - -
Cpe07g00452 289 Pfam Myb-like DNA-binding domain 92 143 IPR001005 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe02g00150 Cpe07g00452 CCT
Cpe07g00452 Cpe11g00176 CCT
Cpe06g00132 Cpe07g00452 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00452 Cpe-Chr7:2891447 Cpe15g00191 Cpe-Chr15:1569966 7.05E-35 dispersed
Cpe11g00176 Cpe-Chr11:957338 Cpe07g00452 Cpe-Chr7:2891447 1.98E-89 wgd
Cpe02g00150 Cpe-Chr2:772129 Cpe07g00452 Cpe-Chr7:2891447 1.03E-38 wgd
Cpe06g00132 Cpe-Chr6:699448 Cpe07g00452 Cpe-Chr7:2891447 8.04E-30 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49744 PF00249 Myb_DNA-binding 1.20E-05 CL0123 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00452 - - cpep:111799190 555.829