Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00458 ATGCCTTTCTTTCACAAAAGCGCTTCGAATTCTCGGCTTCAACAGAAAGCACCAGATTCTGTTTTCTCCGTTGGTCCACCGGAGCCGCTCGCTCAGCGTCGGCTTACCAGGCAGAGGAAGCTCCGGCATCTTACGGATCGAGATATTCGCTTTGAACAACCTCGATCGTTTCCTGATTCTACCGATTTATTGTCAAAATCTAAAACGCATCTTGGAGGTTCCGAACGTTGGTCCTCCATTGCTTTGCCGCAGCCTTTACCTCTGCCAGAGTTCTTTCCGATTCGAAATCCAGAGTCAGGTTCTTGGAGTTCTGGACAAGGTCGCGGTGGATCGCCTTTCGAAACTCCGGTCGGGAAGAGCGCCGATCACGCAACAGCGAAGAGTAGAAGTTCCGGTAACAATCAAAGGCGAATCGCTACAGATTTAGCCTTGGAAGTTGCTAACGGACATACAGGAGGAACTCAACCTGTAAATTTAGGGAAATCGAATTTGATTAAGGATTTTGTTTTTAGTTGTTTGGATCAGCATCCAAACAACAAAGCCAGGGGTTCCCCAACTCATCCGAGTGTTGAAAGGGGTAACTACAAAGTGAAACAGAAGATTTCGACGTCGAAGAGTGCACCGACGAGCATCTTTCCGAGTCCTGCCGTTAGCCCGCGAAGATCATGTACAGGAGATCCTTTTATTTCTGGTTTGAATCGCCATGAACATCAGGAATCTCCTTCCAATAATTCTCCCAAAGTACCATCCCTTAAAACTCCAAATAGTTCTCAACCTTCTCCTCTCCAAAGCCCGGCAGCTCAAAGTTCTGCAAGCAATCCCAGATCTTCTAATGATACGCCATTTCCTCTGCATCATAAGTTACAAAAGAATCATAGTATAGGTCATGTCAATGCCCATCCATTGCCTCTTCCTCCTCCATTAGTAGCCTCGTCACAATCGTCTCCCCAATCTCTTCCGTCGAAAGAGAAACCATACATTTCATCTGTGAAAGGTCAATGGCAAAAGGGAAAGCTTATTGGACGTGGTACGTTTGGAAGCGTTTATCTCGCAACGAACAGCGAGACTGGAGCTTTATGTGCAATGAAAGAAGTTGACCTCATTCCTGATGATCCTAAATGTGCTGAAAGTATAAAGCAACTAGAGCAGGAAATTAAAGTTCTTAGTCAACTTAAACATCCAAATATTGTACAGTATTATGGAAGTGAAATAATTGGGGATCATTTCTACATATATTTGGAGTATGTTTTTCCTGGGTCAATAAATAAATTTGTCCGTGAACGTTGTGGAACGATTACTGAATCTATCGTTCGCAATTTCACCCGACATATTCTCTCTGGACTCGCTTACTTGCATAGCACAAAAACGATCCACAGGGATATCAAAGGTGCAAACTTGCTAGTTGATTCATCAGGCGTCGTCAAACTTGCAGATTTCGGGATGGCGAAACATCTGACAGGGCAGTACGATCTTTCGTTGAAGGGTAGTCCGTACTGGATGGCTCCGGAGGTCATAAAGGCTGTTATGTTGAAAGATGCCAACCCTGATCATGCTTTGGCAGTTGACATTTGGAGTCTGGGTTGCACCATAATTGAAATGCTGAATGGAAAACCTCCATGGAGTGAGTTTGAAGGGCATCAAGTTATGTTCAAGGTGTTGAATAAAGCCCCTCCTATTCCAGAAAAGCTATCTCCAGAAGGGAAAGATTTCCTCCAGTGTTGCTTCCAAAGGAATCCAGCTGACAGATCAACAGCAACGATGCTCCTTGACCATCCTTTCGTAAGATCCTCAATCGACTCAACCGTTTCAGTCCCAACATCAGCATTTTCGACGATGAACCTCGTGGTATTGAATCCTCAAGATCCCACTCCTCCCAAAGGAGATCAGGTGCAAAAATCTCGTGGAATCCCTTCATCGAACATTCCGAGCAATATTCCTGCCAGTGCCGTTAATAACCATCACTTTTCTATCTCAAGGACTCATAAAAGGGAAGTACCACACCTCTGA 2007 44.74 MPFFHKSASNSRLQQKAPDSVFSVGPPEPLAQRRLTRQRKLRHLTDRDIRFEQPRSFPDSTDLLSKSKTHLGGSERWSSIALPQPLPLPEFFPIRNPESGSWSSGQGRGGSPFETPVGKSADHATAKSRSSGNNQRRIATDLALEVANGHTGGTQPVNLGKSNLIKDFVFSCLDQHPNNKARGSPTHPSVERGNYKVKQKISTSKSAPTSIFPSPAVSPRRSCTGDPFISGLNRHEHQESPSNNSPKVPSLKTPNSSQPSPLQSPAAQSSASNPRSSNDTPFPLHHKLQKNHSIGHVNAHPLPLPPPLVASSQSSPQSLPSKEKPYISSVKGQWQKGKLIGRGTFGSVYLATNSETGALCAMKEVDLIPDDPKCAESIKQLEQEIKVLSQLKHPNIVQYYGSEIIGDHFYIYLEYVFPGSINKFVRERCGTITESIVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSSGVVKLADFGMAKHLTGQYDLSLKGSPYWMAPEVIKAVMLKDANPDHALAVDIWSLGCTIIEMLNGKPPWSEFEGHQVMFKVLNKAPPIPEKLSPEGKDFLQCCFQRNPADRSTATMLLDHPFVRSSIDSTVSVPTSAFSTMNLVVLNPQDPTPPKGDQVQKSRGIPSSNIPSNIPASAVNNHHFSISRTHKREVPHL 668
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 2927007 2933866 + Cp4.1LG07g04450.1 Cpe07g00458 472265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00458 668 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 658 - -
Cpe07g00458 668 ProSitePatterns Protein kinases ATP-binding region signature. 340 363 IPR017441 GO:0005524
Cpe07g00458 668 PANTHER - 1 658 - -
Cpe07g00458 668 SUPERFAMILY Protein kinase-like (PK-like) 329 614 IPR011009 -
Cpe07g00458 668 MobiDBLite consensus disorder prediction 176 326 - -
Cpe07g00458 668 MobiDBLite consensus disorder prediction 196 217 - -
Cpe07g00458 668 SMART serkin_6 334 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00458 668 ProSiteProfiles Protein kinase domain profile. 334 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00458 668 MobiDBLite consensus disorder prediction 235 284 - -
Cpe07g00458 668 Pfam Protein kinase domain 335 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00458 668 MobiDBLite consensus disorder prediction 618 649 - -
Cpe07g00458 668 Gene3D Transferase(Phosphotransferase) domain 1 331 618 - -
Cpe07g00458 668 MobiDBLite consensus disorder prediction 41 55 - -
Cpe07g00458 668 MobiDBLite consensus disorder prediction 91 136 - -
Cpe07g00458 668 MobiDBLite consensus disorder prediction 1 69 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00458 Cpe11g00172 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00458 Cpe-Chr7:2927007 Cpe09g00079 Cpe-Chr9:464681 5.81E-108 dispersed
Cpe10g00425 Cpe-Chr10:2474215 Cpe07g00458 Cpe-Chr7:2927007 4.01E-150 wgd
Cpe11g00172 Cpe-Chr11:933038 Cpe07g00458 Cpe-Chr7:2927007 0 wgd
Cpe19g00606 Cpe-Chr19:4987930 Cpe07g00458 Cpe-Chr7:2927007 2.12E-158 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62502 PF00069 Pkinase 2.80E-68 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00458 - - cmo:103487921 983.015