Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00486 ATGGATGGTGGTGATGGAACTGTGAGGCTTGGGGCTCTGAACTTGAAGCCGGATCGGAGCGGCTTTGATTTGGGACCTGATGTGTCTGTTTCGTCTCCGGTGACCAGGCAGAAAGCCGCCGCTGCTAAACAGTTTATAGAGAATCATTACAAGAATTATCTCCAAGGTCTGCAGGATCGCAAAGAGAGACGGAGAACGCTTCAACGAAAAGCGCAAGAAGCTCAGGTATCAGCTGAAGAACAGGAAGAGATGCTGAGGAATTTGGAACGCAGAGAAACAGAATTTATGAGACTGCAAAGACGTAAAGTTGGAATTGATGACTTTGAACAATTAACAGTCATCGGTAAAGGTGCATTCGGTGAGGTTAGATTATGTCGTGCAAAGGGAACTGGGGAAGTTTTTGCCATGAAGAAGCTGAAGAAATCAGAGATGCTTAGCCGTGGGCAGGTTGAGCATGTTCGATCCGAGAGGAATTTACTTGCAGAGGTTGATAGTCGATGCATTGTAAAACTCTTCTATTCTTTTCAAGACTCTGAATTCTTATACCTTATTATGGAGTATTTACCTGGCGGTGACATTATGACATTACTAATGAGAGAAGACGTTCTGTCGGAGGATGTTGCTCGCTTTTACATAGCGGAGAGCGTTTTAGCTATTCATTCAATTCATCAGCACAACTATATACATAGGATTGCCCTAACAATTTTCTCGTATCCGCTCTCATTTACTATACATATGCAGGTTAGATTATGTCGTGCAAAGGGAACTGGGGAAGTTTTTGCCATGAAGAAGCTGAAGAAATCAGAGATGCTTAGCCGTGGGCAGGTTGAGCATGTTCGATCCGAGAGGAATTTACTTGCAGAGGTTGATAGTCGATGCATTGTAAAACTCTTCTATTCTTTTCAAGACTCTGAATTCTTATACCTTATTATGGAGTATTTACCTGGCGGTGACATTATGACATTACTAATGAGAGAAGACGTTCTGTCGGAGGATGTTGCTCGCTTTTACATAGCGGAGAGCGTTTTAGCTATTCATTCAATTCATCAGCACAACTATATACATAGGGATATAAAACCAGATAACCTGATACTAGATAAGAATGGCCATCTGAAGCTTTCAGATTTTGGCTTGTGCAAGCCTCTGGATGATAAGTATTCAAGTATACTTTTGAATGACGAAGATTTAACAGCCCAGCAGGCCAAAAGTGAAGGTCAAGGTCATACTGACACTAATGGATCCCAATGGATGATGCCAAAAGAACAAATTCAACAGTGGAAGCGTAATCGCCGTGCATTGGTTCATAATCACGCTATTAATCTCCAGGCTTTTTCAACTGTTGGGACCCTGGATTACATGGCACCTGAAGTATTGCTTAAGAAAGGATATGGGATGGAGTGTGATTGGTGGTCATTAGGGGCTATTATGTATGAAATGCTGGCTGGTTATCCTCCTTTTTGTTCTGATGATCCAAGGATGACTTTCCGCAAGATAATAAATTGGAGAACTTGCCTGAAATTTCCCGAGGAACCGAAAATCTCAGAGGAAGCCAAGGATCTTATCACTCACTTGCTATGTGATGTTGAAACCAGGTTGGGAACTCGAGGAGTAGAGGAAATAAAGGTTCAAGACCCTCCATCAGATATGCCAACTGTTGGCCCTTGGAGGAAGGTAATAACGTACTTTTCCAGCAAGAATGATTGTGGAATGGTGCTTGCGCTTGATAAGTTGGAATGCTTTATTGCTAAGCTATTATCTCTGCTTCACACTTCAATTTTAATCTTCTGTACGGAAATTCATTCGAACATGTCATGGAAAACACCGTCTCTAGTTTCCTTGTTGGGTCGAATAGACTTGCAAGAAACTGTGATACCAGAAGTTGAGCAAAAGCAGGAAGCATAA 1902 42.06 MDGGDGTVRLGALNLKPDRSGFDLGPDVSVSSPVTRQKAAAAKQFIENHYKNYLQGLQDRKERRRTLQRKAQEAQVSAEEQEEMLRNLERRETEFMRLQRRKVGIDDFEQLTVIGKGAFGEVRLCRAKGTGEVFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLFYSFQDSEFLYLIMEYLPGGDIMTLLMREDVLSEDVARFYIAESVLAIHSIHQHNYIHRIALTIFSYPLSFTIHMQVRLCRAKGTGEVFAMKKLKKSEMLSRGQVEHVRSERNLLAEVDSRCIVKLFYSFQDSEFLYLIMEYLPGGDIMTLLMREDVLSEDVARFYIAESVLAIHSIHQHNYIHRDIKPDNLILDKNGHLKLSDFGLCKPLDDKYSSILLNDEDLTAQQAKSEGQGHTDTNGSQWMMPKEQIQQWKRNRRALVHNHAINLQAFSTVGTLDYMAPEVLLKKGYGMECDWWSLGAIMYEMLAGYPPFCSDDPRMTFRKIINWRTCLKFPEEPKISEEAKDLITHLLCDVETRLGTRGVEEIKVQDPPSDMPTVGPWRKVITYFSSKNDCGMVLALDKLECFIAKLLSLLHTSILIFCTEIHSNMSWKTPSLVSLLGRIDLQETVIPEVEQKQEA 633
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3166307 3172120 - Cp4.1LG07g05210.1 Cpe07g00486 472293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00486 633 SUPERFAMILY Protein kinase-like (PK-like) 90 230 IPR011009 -
Cpe07g00486 633 Gene3D Phosphorylase Kinase; domain 1 245 319 - -
Cpe07g00486 633 ProSiteProfiles Protein kinase domain profile. 108 552 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00486 633 Coils Coil 57 101 - -
Cpe07g00486 633 PANTHER SERINE/THREONINE-PROTEIN KINASE 247 542 - -
Cpe07g00486 633 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 6 230 - -
Cpe07g00486 633 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 247 542 - -
Cpe07g00486 633 PANTHER SERINE/THREONINE-PROTEIN KINASE 6 230 - -
Cpe07g00486 633 ProSitePatterns Protein kinases ATP-binding region signature. 114 137 IPR017441 GO:0005524
Cpe07g00486 633 Pfam Protein kinase domain 108 230 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00486 633 Pfam Protein kinase domain 247 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00486 633 SUPERFAMILY Protein kinase-like (PK-like) 247 541 IPR011009 -
Cpe07g00486 633 Gene3D Phosphorylase Kinase; domain 1 57 240 - -
Cpe07g00486 633 ProSitePatterns Serine/Threonine protein kinases active-site signature. 353 365 IPR008271 GO:0004672|GO:0006468
Cpe07g00486 633 Gene3D Transferase(Phosphotransferase) domain 1 320 549 - -
Cpe07g00486 633 SMART serkin_6 108 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00486 Cpe11g00151 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00486 Cpe-Chr7:3166307 Cpe12g00136 Cpe-Chr12:864627 1.43E-95 dispersed
Cpe11g00151 Cpe-Chr11:846568 Cpe07g00486 Cpe-Chr7:3166307 4.83E-155 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62503 PF00069 Pkinase 1.40E-55 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00486 K08790 - csv:101222805 624.78