Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00494 ATGGGATTAACCATGAAGCTTCATCACTTCTCCCCTTGTTCTTGGGATGAACCCTCTCTCTCCCTTGCTTGCACGAAGCGCTTACGTCCTCCTCCGCCCACCTCCGCCACATCAACGCTCACCGCTTTCGACCTCAAGACCTTCATCAAACCTGATACTAAGAAAGACCCGTCTTCCCCTCGGACAGGAGTTGTGGAAATGCAACCGGGAGGCACACGGTGGAACCCGACGCAAGAACAGATAGCGATATTGGAGATGCTTTATAGGAGAGGAATGAGGACTCCCAATGCTCAACAAATTGAACAAATTACTGCACAGCTTGGGAAGTACGGGAAGATTGAAGGAAAGAATGTGTTCTATTGGTTTCAGAATCATAAAGCTAGAGAACGACAGAAGCAGAAGCGCAATACTCTTGGTCTTGCTCACTCCTCCCCCATAACTCCTCCGACCACGACAACCATC 462 49.57 MGLTMKLHHFSPCSWDEPSLSLACTKRLRPPPPTSATSTLTAFDLKTFIKPDTKKDPSSPRTGVVEMQPGGTRWNPTQEQIAILEMLYRRGMRTPNAQQIEQITAQLGKYGKIEGKNVFYWFQNHKARERQKQKRNTLGLAHSSPITPPTTTTI 154
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3226239 3226774 - Cp4.1LG07g05080.1 Cpe07g00494 472301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00494 154 SUPERFAMILY Homeodomain-like 67 136 IPR009057 -
Cpe07g00494 154 CDD homeodomain 72 133 IPR001356 GO:0003677
Cpe07g00494 154 PANTHER WUSCHEL-RELATED HOMEOBOX 4 5 152 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Cpe07g00494 154 MobiDBLite consensus disorder prediction 49 74 - -
Cpe07g00494 154 MobiDBLite consensus disorder prediction 137 154 - -
Cpe07g00494 154 ProSiteProfiles 'Homeobox' domain profile. 67 132 IPR001356 GO:0003677
Cpe07g00494 154 Pfam Homeodomain 72 131 IPR001356 GO:0003677
Cpe07g00494 154 SMART HOX_1 69 136 IPR001356 GO:0003677
Cpe07g00494 154 Gene3D - 71 138 - -
Cpe07g00494 154 MobiDBLite consensus disorder prediction 130 154 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00494 Cpe11g00141 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01371 Cpe-Chr4:11141487 Cpe07g00494 Cpe-Chr7:3226239 6.08E-31 dispersed
Cpe07g00494 Cpe-Chr7:3226239 Cpe20g00149 Cpe-Chr20:844047 3.01E-30 dispersed
Cpe02g01242 Cpe-Chr2:11163422 Cpe07g00494 Cpe-Chr7:3226239 1.35E-30 transposed
Cpe11g00141 Cpe-Chr11:767274 Cpe07g00494 Cpe-Chr7:3226239 1.38E-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49751 PF00046 Homeodomain 1.00E-19 CL0123 Cpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00494 - - cpep:111798148 291.582