Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe07g00498 | ATGGCGCCGCCGTATGCGCTTGATGCTCTGTTCTGCCCGGAGGAGCACTGGGAGGACCAAGAACAAGAACAAGAACAACAACAACGTTGTACTAATTTAACAAACGAGGATCTGTTCTGGGAAAACGATGAACTAATTTCTCTTCTTGCTCGTGAGAATCCTAATGAACTCTTTCAAATCATTCAGACTAACCCTTTTCTCGCCGCCGCCCGACGAGCCGCCGTCGAGTGGATGCTGAATGTCAATACCCACTACTCCTTCTCTGCTCTCACGGCAGTTCTCGCCGTCGATTACTTCGATAAGTTCTTGTCGTTTTTTCATTTTCAAACAGATAAGCCATGGATGTTTCACCTCGCTGCTGTTGCTTGTCTCTCTCTTGCTGCCAAAGTGGAGGAGACCCATGTGCCTCTTTTGTTGGACCTTCAAGTTGAAGACAGTAGATATCTGTTTGAAGCCAAGACAATCAAGAAAATGGAGCTTCTTGTGCTCTCTACGCTTCAGTGGCGGATGAATCCTGTTACCCCATTTTCTTTTGTGGATCATATGTCAAGAAGGCTTGGATTCAACGGCCATATCTGCCGGGAAATTCATTGGTGGTGTGAACGAACTATTCTCTCTGTTATTCTAGAGTCAGATTTCATGTCCTTTCTTCCTTCTGTAATGGCCACCGCCACAATGCTGCACGTTTTCAAAGCAATGGAGCCCCACCTCGACGTTGAATACGATTACCATCTTCTTAACATCCTCAAACTCGACAAGGGGAATGTGGAGGAATGCTGTAAACTAATCTCGGATGCATCGAGAAGAAACAGCCACCATTTTAAAAAACGCAAATTTGGGTCGGTTCCAAGCAGTCCAAACGGTGTCATGGACGTGTCATTCAGCTCCGACAGCTCGAACGACTCGTGGTCGGTAGCTTCGTCGGTTTCATCCTCGCCGGAGCCATTAACAAAGAAGAACAGAGTATTGGATCAAAATTTCGCCGACATTCCTCGCTAG | 999 | 46.65 | MAPPYALDALFCPEEHWEDQEQEQEQQQRCTNLTNEDLFWENDELISLLARENPNELFQIIQTNPFLAAARRAAVEWMLNVNTHYSFSALTAVLAVDYFDKFLSFFHFQTDKPWMFHLAAVACLSLAAKVEETHVPLLLDLQVEDSRYLFEAKTIKKMELLVLSTLQWRMNPVTPFSFVDHMSRRLGFNGHICREIHWWCERTILSVILESDFMSFLPSVMATATMLHVFKAMEPHLDVEYDYHLLNILKLDKGNVEECCKLISDASRRNSHHFKKRKFGSVPSSPNGVMDVSFSSDSSNDSWSVASSVSSSPEPLTKKNRVLDQNFADIPR | 332 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 3257734 | 3259372 | + | Cp4.1LG07g05140.1 | Cpe07g00498 | 472305 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe07g00498 | 332 | MobiDBLite | consensus disorder prediction | 290 | 319 | - | - | |
| Cpe07g00498 | 332 | ProSitePatterns | Cyclins signature. | 71 | 102 | IPR006671 | - | |
| Cpe07g00498 | 332 | Gene3D | - | 172 | 261 | - | - | |
| Cpe07g00498 | 332 | SUPERFAMILY | Cyclin-like | 155 | 268 | IPR036915 | - | |
| Cpe07g00498 | 332 | SUPERFAMILY | Cyclin-like | 42 | 171 | IPR036915 | - | |
| Cpe07g00498 | 332 | SMART | Cyclin_C_2 | 173 | 298 | IPR004367 | - | |
| Cpe07g00498 | 332 | Gene3D | - | 56 | 171 | - | - | |
| Cpe07g00498 | 332 | SMART | cyclin_7 | 76 | 164 | IPR013763 | - | |
| Cpe07g00498 | 332 | Pfam | Cyclin, N-terminal domain | 68 | 171 | IPR006671 | - | |
| Cpe07g00498 | 332 | Pfam | Cyclin, C-terminal domain | 173 | 297 | IPR004367 | - | |
| Cpe07g00498 | 332 | PANTHER | CYCLINS | 20 | 321 | IPR039361 | - | |
| Cpe07g00498 | 332 | PANTHER | CYCLIN D3.1 PROTEIN | 20 | 321 | - | - | |
| Cpe07g00498 | 332 | CDD | CYCLIN | 71 | 163 | IPR013763 | - | |
| Cpe07g00498 | 332 | MobiDBLite | consensus disorder prediction | 290 | 332 | - | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe02g00199 | Cpe07g00498 | CCT | |
| Cpe07g00498 | Cpe11g00137 | CCT | |
| Cpe02g00199 | Cpe07g00498 | ECH | |
| Cpe07g00498 | Cpe11g00137 | ECH | |
| Cpe06g00180 | Cpe07g00498 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe07g00498 | Cpe-Chr7:3257734 | Cpe14g00286 | Cpe-Chr14:1670885 | 2.75E-97 | dispersed | |
| Cpe01g00427 | Cpe-Chr1:2468894 | Cpe07g00498 | Cpe-Chr7:3257734 | 7.32E-87 | wgd | |
| Cpe11g00137 | Cpe-Chr11:738016 | Cpe07g00498 | Cpe-Chr7:3257734 | 2.91E-157 | wgd | |
| Cpe15g00473 | Cpe-Chr15:5737985 | Cpe07g00498 | Cpe-Chr7:3257734 | 9.77E-68 | wgd | |
| Cpe19g00642 | Cpe-Chr19:5181481 | Cpe07g00498 | Cpe-Chr7:3257734 | 1.10E-75 | wgd | |
| Cpe02g00199 | Cpe-Chr2:1031220 | Cpe07g00498 | Cpe-Chr7:3257734 | 1.23E-67 | wgd | |
| Cpe04g00298 | Cpe-Chr4:3757790 | Cpe07g00498 | Cpe-Chr7:3257734 | 3.51E-69 | wgd | |
| Cpe06g00180 | Cpe-Chr6:976067 | Cpe07g00498 | Cpe-Chr7:3257734 | 1.56E-102 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe07g00498 | K14505 | - | csv:101205442 | 448.358 |