Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00503 ATGGCTGAGACTCAGAACTCTGTCCGTGTTACTCGTGCTTCCAAGAAGAGAGCTGCCATGGCTTCCATGCCCGAGGATCAACCCGTCACTAAAAAGCGGGTGGTTCTTGGAGAGCTTTCGAATATTCAGAACGTTACTGGCTCACTGCCGCAGAAGAGAAGGGCCAAATCTCAGATTACCAAATGCAAGCCTAAAAAGAGATGTAAGGTTGGTGTTGCTCCGACGATCAAGACGGTTGTTGTTGAAGATAATGAACCGACGTTGAGTATTGATGATATCTTGGACGATCCTGAGATGAAGGGGCCTTATTCATCGGATATCTATTCTTATCTTCGCAAAATGGAGGCGGAACCGAAAAGAAGGCCGATTCCTAATTACATAGAGAAGATCCAGACGGATGTAAGTGCCAATATGAGAGGGGTTTTGGTTGATTGGATGGTTGAGGTTGCTGAGGAATACAAACTCGGCCCCGATTCTCTGTATCTATCCATCTCTTACATCGATAGATACCTATCAATGAACATCCTCAGTAGGCAAAGGCTTCAATTGTTGGGCGTATCTTCAATGCTGATCGCCTCGAAGTATGAAGAGATCACTCCTCCACATGTGGAAGATTTCTGCTACATAACAGATAATACTTACAGAAGGGATGAGGTTGTGAAAATGGAGGCTGATATACTTAAGTCTTTGAACTTTGAAATGGGAAATCCTACTGCCAAGACATTCTTAAGGCAAGTGAGGTTCACTAATATTGCTCAAGAAGATTTCAAAACACCAAGTCTGCAATTGGAATTCCTGGGTCATTACCTTGCTGAGCTTAGCCTACTGGACTATAATTTTGTTAAGTTCTTGCCTTCTTTGGTTGCTGCTTCAGCTGTGTTTCTTGCAAAATTCATCATGCGCCCAAAGCTGCATCCTTGGGGTTCAAACATACAACAATACACAGGCTACAAGCCAGCTGATTTGAGGTCGTCTGTGCTTTTGTTACATGATTTGTACATGGCCAGAAGAGGAGGGTCTCTGATTGCTGTGAGAGAGAAATACAAGTTGCATATGTTCAAATGTGTTGCAATGATGCCTTCACCCCCTGAGATACCGTTTTCCTATTTTGAAGAAGCTTAG 1122 43.49 MAETQNSVRVTRASKKRAAMASMPEDQPVTKKRVVLGELSNIQNVTGSLPQKRRAKSQITKCKPKKRCKVGVAPTIKTVVVEDNEPTLSIDDILDDPEMKGPYSSDIYSYLRKMEAEPKRRPIPNYIEKIQTDVSANMRGVLVDWMVEVAEEYKLGPDSLYLSISYIDRYLSMNILSRQRLQLLGVSSMLIASKYEEITPPHVEDFCYITDNTYRRDEVVKMEADILKSLNFEMGNPTAKTFLRQVRFTNIAQEDFKTPSLQLEFLGHYLAELSLLDYNFVKFLPSLVAASAVFLAKFIMRPKLHPWGSNIQQYTGYKPADLRSSVLLLHDLYMARRGGSLIAVREKYKLHMFKCVAMMPSPPEIPFSYFEEA 373
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 3300135 3302639 - Cp4.1LG07g04950.1 Cpe07g00503 472310
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00503 373 SUPERFAMILY Cyclin-like 237 364 IPR036915 -
Cpe07g00503 373 MobiDBLite consensus disorder prediction 1 30 - -
Cpe07g00503 373 PIRSF Cyclin_A_B_D_E 1 367 IPR039361 -
Cpe07g00503 373 PANTHER CYCLINS 24 372 IPR039361 -
Cpe07g00503 373 Pfam Cyclin, N-terminal domain 106 234 IPR006671 -
Cpe07g00503 373 ProSitePatterns Cyclins signature. 139 170 IPR006671 -
Cpe07g00503 373 Pfam Cyclin, C-terminal domain 237 361 IPR004367 -
Cpe07g00503 373 Gene3D - 106 358 - -
Cpe07g00503 373 SMART Cyclin_C_2 237 362 IPR004367 -
Cpe07g00503 373 PANTHER CYCLIN-A3-1-RELATED 24 372 - -
Cpe07g00503 373 CDD CYCLIN 237 330 IPR013763 -
Cpe07g00503 373 CDD CYCLIN 138 227 IPR013763 -
Cpe07g00503 373 SMART cyclin_7 246 331 IPR013763 -
Cpe07g00503 373 SMART cyclin_7 144 228 IPR013763 -
Cpe07g00503 373 Gene3D - 122 235 - -
Cpe07g00503 373 SUPERFAMILY Cyclin-like 95 234 IPR036915 -
       

Event-related genes


       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00503 Cpe-Chr7:3300135 Cpe13g00635 Cpe-Chr13:6074518 8.70E-102 dispersed
Cpe11g00133 Cpe-Chr11:725289 Cpe07g00503 Cpe-Chr7:3300135 0 wgd
Cpe15g00455 Cpe-Chr15:5624271 Cpe07g00503 Cpe-Chr7:3300135 2.87E-83 wgd
Cpe02g00206 Cpe-Chr2:1058884 Cpe07g00503 Cpe-Chr7:3300135 5.34E-165 wgd
Cpe04g00309 Cpe-Chr4:3874502 Cpe07g00503 Cpe-Chr7:3300135 1.26E-98 wgd
Cpe06g00185 Cpe-Chr6:995417 Cpe07g00503 Cpe-Chr7:3300135 3.84E-169 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00503 K06627 - csv:101206145 649.047