Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe07g00503 | ATGGCTGAGACTCAGAACTCTGTCCGTGTTACTCGTGCTTCCAAGAAGAGAGCTGCCATGGCTTCCATGCCCGAGGATCAACCCGTCACTAAAAAGCGGGTGGTTCTTGGAGAGCTTTCGAATATTCAGAACGTTACTGGCTCACTGCCGCAGAAGAGAAGGGCCAAATCTCAGATTACCAAATGCAAGCCTAAAAAGAGATGTAAGGTTGGTGTTGCTCCGACGATCAAGACGGTTGTTGTTGAAGATAATGAACCGACGTTGAGTATTGATGATATCTTGGACGATCCTGAGATGAAGGGGCCTTATTCATCGGATATCTATTCTTATCTTCGCAAAATGGAGGCGGAACCGAAAAGAAGGCCGATTCCTAATTACATAGAGAAGATCCAGACGGATGTAAGTGCCAATATGAGAGGGGTTTTGGTTGATTGGATGGTTGAGGTTGCTGAGGAATACAAACTCGGCCCCGATTCTCTGTATCTATCCATCTCTTACATCGATAGATACCTATCAATGAACATCCTCAGTAGGCAAAGGCTTCAATTGTTGGGCGTATCTTCAATGCTGATCGCCTCGAAGTATGAAGAGATCACTCCTCCACATGTGGAAGATTTCTGCTACATAACAGATAATACTTACAGAAGGGATGAGGTTGTGAAAATGGAGGCTGATATACTTAAGTCTTTGAACTTTGAAATGGGAAATCCTACTGCCAAGACATTCTTAAGGCAAGTGAGGTTCACTAATATTGCTCAAGAAGATTTCAAAACACCAAGTCTGCAATTGGAATTCCTGGGTCATTACCTTGCTGAGCTTAGCCTACTGGACTATAATTTTGTTAAGTTCTTGCCTTCTTTGGTTGCTGCTTCAGCTGTGTTTCTTGCAAAATTCATCATGCGCCCAAAGCTGCATCCTTGGGGTTCAAACATACAACAATACACAGGCTACAAGCCAGCTGATTTGAGGTCGTCTGTGCTTTTGTTACATGATTTGTACATGGCCAGAAGAGGAGGGTCTCTGATTGCTGTGAGAGAGAAATACAAGTTGCATATGTTCAAATGTGTTGCAATGATGCCTTCACCCCCTGAGATACCGTTTTCCTATTTTGAAGAAGCTTAG | 1122 | 43.49 | MAETQNSVRVTRASKKRAAMASMPEDQPVTKKRVVLGELSNIQNVTGSLPQKRRAKSQITKCKPKKRCKVGVAPTIKTVVVEDNEPTLSIDDILDDPEMKGPYSSDIYSYLRKMEAEPKRRPIPNYIEKIQTDVSANMRGVLVDWMVEVAEEYKLGPDSLYLSISYIDRYLSMNILSRQRLQLLGVSSMLIASKYEEITPPHVEDFCYITDNTYRRDEVVKMEADILKSLNFEMGNPTAKTFLRQVRFTNIAQEDFKTPSLQLEFLGHYLAELSLLDYNFVKFLPSLVAASAVFLAKFIMRPKLHPWGSNIQQYTGYKPADLRSSVLLLHDLYMARRGGSLIAVREKYKLHMFKCVAMMPSPPEIPFSYFEEA | 373 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 3300135 | 3302639 | - | Cp4.1LG07g04950.1 | Cpe07g00503 | 472310 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe07g00503 | 373 | SUPERFAMILY | Cyclin-like | 237 | 364 | IPR036915 | - | |
| Cpe07g00503 | 373 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
| Cpe07g00503 | 373 | PIRSF | Cyclin_A_B_D_E | 1 | 367 | IPR039361 | - | |
| Cpe07g00503 | 373 | PANTHER | CYCLINS | 24 | 372 | IPR039361 | - | |
| Cpe07g00503 | 373 | Pfam | Cyclin, N-terminal domain | 106 | 234 | IPR006671 | - | |
| Cpe07g00503 | 373 | ProSitePatterns | Cyclins signature. | 139 | 170 | IPR006671 | - | |
| Cpe07g00503 | 373 | Pfam | Cyclin, C-terminal domain | 237 | 361 | IPR004367 | - | |
| Cpe07g00503 | 373 | Gene3D | - | 106 | 358 | - | - | |
| Cpe07g00503 | 373 | SMART | Cyclin_C_2 | 237 | 362 | IPR004367 | - | |
| Cpe07g00503 | 373 | PANTHER | CYCLIN-A3-1-RELATED | 24 | 372 | - | - | |
| Cpe07g00503 | 373 | CDD | CYCLIN | 237 | 330 | IPR013763 | - | |
| Cpe07g00503 | 373 | CDD | CYCLIN | 138 | 227 | IPR013763 | - | |
| Cpe07g00503 | 373 | SMART | cyclin_7 | 246 | 331 | IPR013763 | - | |
| Cpe07g00503 | 373 | SMART | cyclin_7 | 144 | 228 | IPR013763 | - | |
| Cpe07g00503 | 373 | Gene3D | - | 122 | 235 | - | - | |
| Cpe07g00503 | 373 | SUPERFAMILY | Cyclin-like | 95 | 234 | IPR036915 | - |
Event-related genes
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| Cpe07g00503 | Cpe11g00133 | CCT | |
| Cpe02g00206 | Cpe07g00503 | CCT | |
| Cpe07g00503 | Cpe11g00133 | ECH | |
| Cpe02g00206 | Cpe07g00503 | ECH | |
| Cpe06g00185 | Cpe07g00503 | CST |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe07g00503 | Cpe-Chr7:3300135 | Cpe13g00635 | Cpe-Chr13:6074518 | 8.70E-102 | dispersed | |
| Cpe11g00133 | Cpe-Chr11:725289 | Cpe07g00503 | Cpe-Chr7:3300135 | 0 | wgd | |
| Cpe15g00455 | Cpe-Chr15:5624271 | Cpe07g00503 | Cpe-Chr7:3300135 | 2.87E-83 | wgd | |
| Cpe02g00206 | Cpe-Chr2:1058884 | Cpe07g00503 | Cpe-Chr7:3300135 | 5.34E-165 | wgd | |
| Cpe04g00309 | Cpe-Chr4:3874502 | Cpe07g00503 | Cpe-Chr7:3300135 | 1.26E-98 | wgd | |
| Cpe06g00185 | Cpe-Chr6:995417 | Cpe07g00503 | Cpe-Chr7:3300135 | 3.84E-169 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe07g00503 | K06627 | - | csv:101206145 | 649.047 |