Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00522 ATGTATTCAGGGGCCCCATTTTGGAAACTGATTTTGAAGCAGTTTGATGATTTACTAGTGAAGATATTAATTGTTGCAGCAGTTGTTTCTTTCCTATTGGCTTTGATAAATGGAGAGACAGGCATAATAGCATTTTTGGAGCCTTCAGTAATTCTAATGATATTGGCTGCAAATGCAGCAGTAGGCGTGATTACAGAAACAAACGCCGAAAAGGCTCTTGTGGAACTACGGGCATACCAGGCAGATATTGCTACTGTGATGAGAAATGGTTGCTTTTCAATACTTCCGGCTACAGAGCTTGTTCCAGGTGATATTGTAGAAGTTGCTGTGGGGTGCAAAATTCCAGCTGATATGCGAATGATTGAGATGCTTAGTAATCAGCTGCGTGTTGATCAAGCAATTCTTACAGGTGAGAGTTGCTCTGTTGAAAAAGAGCTGGAGGCCACAAGAGCAGTAAATGCTGTATATCAAGACAAGACAAATATTCTTTTTTCTGGCACTGTGGTGGTTGCTGGCAGGGCACGTGCTGTTGTGGTAGGAGTTGGTGCAAATACTGCTATGGGCAATATACGAGATTCTATATTGCAAACGGATGATGAGGTGACACCATTGAAAAAGAAGCTAGATGAATTTGGTACTTTTCTGGCCAAGGTTATTGCTGGAATTTGTGCACTTGTATGGATAGTGAACATTGGTCACTTTCGTGATCCTTCTCATGGTGGGATTTTGAGTGGTGCAATACACTACTTCAAGATTGCAGTTGCTCTTGCTGTTGCAGCGATTCCTGAAGGACTTCCTGCCGTTGTCACAACGTGTTTGGCTCTTGGCACCAAAAGAATGGCACGTCTGAATGCAATTGTGAGGTCTTTGCCATCTGTTGAGACTTTAGGCTGCACTACTGTTATATGTAGTGACAAGACTGGAACTTTGACTACGAATATGATGTCTGTCTCAAAGATTTGTGTGGTCCATTCTGTTTTGCATGGTCCACAACTTTCCGAGTACAATGTCAGCGGTACAACATACGCTCCTGATGGTACTATTTTTGACAGCACTGGAGTACAGCTTGAGTTTCCAGCTCAATTGCCTTGTATTCTACACATGGCAATGGGCTCAGCCCTCTGCAACGAGTCTACTTTGCAGTATAATCCAGATAAGGGGAACTACGAAAAAATTGGTGAATCAACTGAAGTAGCACTGCGTGTCTTTGCTGAAAAGGTTGGTCTTCCTGGTTTTACTTCAATGCCTTTTGCTCTAAATATGCTAAGCAAGCATGAGCGCGCATCCTATTGTAACCACCATTGGGATAACCAGTTCAAGAAGATTTCTGTATTGGAATTTTCTCGTGATCGCAAGATGATGAGCATTTTATGTAGCAGAAACCAGTCACATATCCTTTTCTCCAAAGGTGCCCCTGAGAGCATTATTTCGAGATGCTCAAGTATCCTTTGCAATGAAGATGGTTCCACCAATGTTTTAACTCCTAGTATTCGTGCTGAACTGGAAGCAAGATTTCAAAGTTTTGCAGGAAATGAAATGCTTAGGTGCCTGGCTATAGCAATCAAATTGCTTCCTGTGAGTCAACAGAGTTTATCATTTGATGATGAGCAAGACCTAACATTCATTGGGTTGGTTGGAATGCTTGATCCACCGAGAGAGGAAGTGAGAAATGCTATGCTTTCATGTATGAATGCTGGTATACGTGTTATAGTCGTAACTGGGGACAACAAGTCAACTGCTGAATCACTCTGCCGCAAGATTGGTGCTTTTGACCACTTGGTAGATCTAGCTGATCATTCTTTTACTGCTTCTGAATTTGAAGAGCTACCTGCAATGCAACAAACAATGGCATTGCAACGAATGGCACTCTTCACCAGGGTTGAACCTTCTCATAAGCAAATGCTTGTGGAGGCCTTACAACATCAGAATGAAGTGAGTGCATCTGATATGGTCTTAGCTGATGACAATTTTGCTACTATTGTTGCGGCTGTTGCAGAGGGCAGAGCTATTTACAATAATACTAAGCAGTTCATCAGATACATGATCTCTTCAAATATTGGTGAAGTAGTTTGTATATTTGTGGCAGCTGTTCTTGGAATACCAGAGACGCTTGCCCCTGTGCAACTTCTTTGGGTTAACTTGGTCACTGATGGATTGCCTGCAACTGCAATTGGATTTAATAAGCAAGACTCCGATGTAATGAAATCTAAGCCTCGAAAGGTGAATGAAGCTGTGGTGACTGGATGGTTGTTCTTTCGTTATTTGGTAATTGGAGCGTATGTTGGTCTTGCAACAATTGCTGGCTTCATATGGTGGTTTATATACTCCGACAGTGGTCCTAAGCTACCTTACGCTGAGTTGATGAGTTTTGATACTTGTTCAACAAGAGCGACAACATACCCTTGCAGTATATTTGAGGATCGGCATCCGTCAACTGTTTCTATGACTGTACTTGTTGTCGTCGAGATGTTCAATGCTTTAAATAATCTAAGCGAAAATCAATCTCTTCTTGTTATCCCTCCCTGGAGTAATTTATGGCTCGTTGCCTCCATTGTCATAACCATGATCCTTCACATGCTTATTATGTATGTGCGACCACTAGCTGTTCTTTTCTCTGTAACGCCATTATCTTGGGCTGAATGGACGATGGTTATAATTATTGATGAGATACTGAAATTCAGAAGGCATGAGTTGCTTCCAAAGAAGGAATTGCGTGACAATTTATCAGAACGTGAAAATTTTACATTGCTGCTTTTGGAATCTTTTTCA 2769 41.68 MYSGAPFWKLILKQFDDLLVKILIVAAVVSFLLALINGETGIIAFLEPSVILMILAANAAVGVITETNAEKALVELRAYQADIATVMRNGCFSILPATELVPGDIVEVAVGCKIPADMRMIEMLSNQLRVDQAILTGESCSVEKELEATRAVNAVYQDKTNILFSGTVVVAGRARAVVVGVGANTAMGNIRDSILQTDDEVTPLKKKLDEFGTFLAKVIAGICALVWIVNIGHFRDPSHGGILSGAIHYFKIAVALAVAAIPEGLPAVVTTCLALGTKRMARLNAIVRSLPSVETLGCTTVICSDKTGTLTTNMMSVSKICVVHSVLHGPQLSEYNVSGTTYAPDGTIFDSTGVQLEFPAQLPCILHMAMGSALCNESTLQYNPDKGNYEKIGESTEVALRVFAEKVGLPGFTSMPFALNMLSKHERASYCNHHWDNQFKKISVLEFSRDRKMMSILCSRNQSHILFSKGAPESIISRCSSILCNEDGSTNVLTPSIRAELEARFQSFAGNEMLRCLAIAIKLLPVSQQSLSFDDEQDLTFIGLVGMLDPPREEVRNAMLSCMNAGIRVIVVTGDNKSTAESLCRKIGAFDHLVDLADHSFTASEFEELPAMQQTMALQRMALFTRVEPSHKQMLVEALQHQNEVSASDMVLADDNFATIVAAVAEGRAIYNNTKQFIRYMISSNIGEVVCIFVAAVLGIPETLAPVQLLWVNLVTDGLPATAIGFNKQDSDVMKSKPRKVNEAVVTGWLFFRYLVIGAYVGLATIAGFIWWFIYSDSGPKLPYAELMSFDTCSTRATTYPCSIFEDRHPSTVSMTVLVVVEMFNALNNLSENQSLLVIPPWSNLWLVASIVITMILHMLIMYVRPLAVLFSVTPLSWAEWTMVIIIDEILKFRRHELLPKKELRDNLSERENFTLLLLESFS 923
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3438647 3459780 + Cp4.1LG07g04910.1 Cpe07g00522 472329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00522 923 Gene3D - 647 898 - -
Cpe07g00522 923 SUPERFAMILY Calcium ATPase, transduction domain A 82 193 IPR008250 -
Cpe07g00522 923 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 310 547 IPR023299 GO:0000166
Cpe07g00522 923 SUPERFAMILY Calcium ATPase, transmembrane domain M 5 893 IPR023298 -
Cpe07g00522 923 SUPERFAMILY HAD-like 536 666 IPR036412 -
Cpe07g00522 923 Pfam Cation transporter/ATPase, N-terminus 5 30 IPR004014 -
Cpe07g00522 923 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 50 325 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe07g00522 923 Pfam E1-E2 ATPase 80 282 - -
Cpe07g00522 923 Pfam Cation transporting ATPase, C-terminus 702 887 IPR006068 -
Cpe07g00522 923 Gene3D - 13 95 - -
Cpe07g00522 923 PANTHER CALCIUM-TRANSPORTING ATPASE 4 647 - -
Cpe07g00522 923 PANTHER CALCIUM-TRANSPORTING ATPASE 646 893 - -
Cpe07g00522 923 SFLD Haloacid Dehalogenase 298 656 - -
Cpe07g00522 923 Pfam haloacid dehalogenase-like hydrolase 541 662 - -
Cpe07g00522 923 Gene3D - 144 313 - -
Cpe07g00522 923 PRINTS P-type cation-transporting ATPase superfamily signature 131 145 - -
Cpe07g00522 923 PRINTS P-type cation-transporting ATPase superfamily signature 303 317 - -
Cpe07g00522 923 PRINTS P-type cation-transporting ATPase superfamily signature 543 554 - -
Cpe07g00522 923 PRINTS P-type cation-transporting ATPase superfamily signature 565 575 - -
Cpe07g00522 923 PRINTS P-type cation-transporting ATPase superfamily signature 641 653 - -
Cpe07g00522 923 ProSitePatterns E1-E2 ATPases phosphorylation site. 305 311 IPR018303 -
Cpe07g00522 923 Pfam Cation transport ATPase (P-type) 373 482 - -
Cpe07g00522 923 PANTHER SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 3 646 893 - -
Cpe07g00522 923 Gene3D - 548 646 IPR023214 -
Cpe07g00522 923 Gene3D - 314 547 IPR023299 GO:0000166
Cpe07g00522 923 PANTHER SARCOPLASMIC/ENDOPLASMIC RETICULUM CALCIUM ATPASE 3 4 647 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01252 Cpe-Chr2:11276691 Cpe07g00522 Cpe-Chr7:3438647 0 dispersed
Cpe07g00522 Cpe-Chr7:3438647 Cpe20g00800 Cpe-Chr20:7185035 1.86E-14 dispersed
Cpe19g00675 Cpe-Chr19:5367407 Cpe07g00522 Cpe-Chr7:3438647 6.30E-63 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00522 K05853 - csv:101211345 1633.23