Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00557 ATGTTGAAGGTTTCCTCCTCATCTGACTGCATTTCCATCTTCATCTCTCTTCTTCTCCTCTCACTTCCTTCCACCGCTCTCGCCCTCTCCGACTCGGATCACCCGGTTCTCGCTAACGCTACTCTCCAGTCTAGTAATGTATCCAGTCCGAGGAATAAGGAGGGTAGTTTTGCTGACATAATTGATCGTGCTTTGGAGAATGAGTTCAAGGAGAATGACCAGAATGAAGCAACTGATGCAGGAGGCTTCAACAACAGCGTAGCGGAGCAGCAGGCAGTTCTGGAGACTGTGGCAAGGGTAAAGTCAAAGAAAAATGATACCAAAGAGGAAAAGTTTCAGCTTCAAAATGTTTTCAATTTGGACAGTGATAATGGAGCTGAAGACACTCCTACATTGATTGATCGGAAGGACAATGTCTTTATCATATCTAACTTCAAGTCTAAATATCCAGTGCTGCAGCTAGACTTGAGATTGATCTCAGATTTGGTTATCGTTATTGTCTCTGCAACTTGTGGTGGCATTGCCTTCGCCTGTGCTGGACAACCAGTTATAACTGGATACCTTCTAGCAGGATCTATTATTGGGCCTGGAGGATTTAATTTTGTCAGTGAAATGGTGCAAGTTGAAACGGTGGCACAATTTGGTGTAGTTTTTCTTCTTTTTGCACTGGGGTTGGAGTTTTCAACAACTAAGCTTCGAGTTGTTCGTGCAGTTGCAGTCCTTGGTGGCCTGCTCCAAATTATCCTATTTATGTGCCTCAGTGGGATCATAGCCTCGTCATGCGGTGGGAGTGCTTCTGAAGGAGTTTTTGTTGGAGCATTTCTATCAATGTCCTCAACAGCAGTGGTGCTGAAATTTTTGATGGAAAAGAATTCGACAAATGCTCTTCATGGACAAGTCACGATCGGCACCCTTATCTTGCAGGACTGTGCTGTTGGGTTACTTTTTGCTTTGCTTCCAGTGCTGGGTGGGAATTCTGGTATTCTTCAGGGAGTGATATCCATGAGTAAAGTGTTGGTGATCTTGGTTACTTTTTGGGTTGTTTTGTCAATTTTATCCCGTACATGTATTCCTTGGTTCTTAAAATTGATGATAAGTCTATCATCACAGACCAACGAACTCTATCAATTAGCATCAGTGGCATTCTGCTTGCTTGTAGCGTGGTGTAGCGATAAGTTAGGGCTAAGTCTAGAATTGGGCTCATTTGCTGCTGGAGTTATGATATCAACAACTGATCTTGCTCAACATACCTTCGAACAAATAGAGCCTATAAGGAACTTCTTTGCGGCCCTTTTTCTTGCCAGCATTGGAATGCTGATCAACGTTCAGTTTTTGTGGAACCATGTTGATATATTGCTTGCAGCTGTTATACTAGTAATAATTGTAAAAACAATTGTAATTAGCACAGTGGTGAAGGGATTTGGGTACAACAACAGGACGTCACTTCTGGTTGGAATGTCTCTGGCTCAGATAGGGGAATTTGCTTTTGTTCTTCTCAGCCGTGCTTCTAATCTTCATCTAGTAGAGGGAAAACTGTATCTGTTGCTTATTGGGACCACAGCCCTTAGTCTGGTTACAACTCCTCTTCTTTTCAAGCTGATACCTGCTGTAGTGCACTTAGGCGTGCTATTGCGGTGGTTCTCTCCAGACGGTCTCGTTGAGATTGGATTTAAAGGAGACATCATCCGCTCAGACAGTGTAAAGCAGCGAGTTATGTTGATAGTTCAGGGACCTCATGATTCATGA 1746 43.3 MLKVSSSSDCISIFISLLLLSLPSTALALSDSDHPVLANATLQSSNVSSPRNKEGSFADIIDRALENEFKENDQNEATDAGGFNNSVAEQQAVLETVARVKSKKNDTKEEKFQLQNVFNLDSDNGAEDTPTLIDRKDNVFIISNFKSKYPVLQLDLRLISDLVIVIVSATCGGIAFACAGQPVITGYLLAGSIIGPGGFNFVSEMVQVETVAQFGVVFLLFALGLEFSTTKLRVVRAVAVLGGLLQIILFMCLSGIIASSCGGSASEGVFVGAFLSMSSTAVVLKFLMEKNSTNALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGILQGVISMSKVLVILVTFWVVLSILSRTCIPWFLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTFEQIEPIRNFFAALFLASIGMLINVQFLWNHVDILLAAVILVIIVKTIVISTVVKGFGYNNRTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLIGTTALSLVTTPLLFKLIPAVVHLGVLLRWFSPDGLVEIGFKGDIIRSDSVKQRVMLIVQGPHDS 581
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3691795 3701150 - Cp4.1LG07g06210.1 Cpe07g00557 472364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00557 581 PANTHER K(+) EFFLUX ANTIPORTER 6 19 581 - -
Cpe07g00557 581 Pfam Sodium/hydrogen exchanger family 163 532 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cpe07g00557 581 Gene3D - 156 539 IPR038770 -
Cpe07g00557 581 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 19 581 IPR045158 GO:0015386|GO:0071805|GO:1902600
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01063 Cpe-Chr4:9343360 Cpe07g00557 Cpe-Chr7:3691795 0 dispersed
Cpe07g00557 Cpe-Chr7:3691795 Cpe09g00132 Cpe-Chr9:780925 0 dispersed
Cpe11g00079 Cpe-Chr11:415107 Cpe07g00557 Cpe-Chr7:3691795 0 wgd
Cpe15g00398 Cpe-Chr15:5172010 Cpe07g00557 Cpe-Chr7:3691795 3.81E-28 wgd
Cpe18g00364 Cpe-Chr18:5017491 Cpe07g00557 Cpe-Chr7:3691795 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00557 - - csv:101217282 973.0