Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00560 ATGCTGTTCTTCGAGGATTTGTGGCAGATGCTCTGGTTTGAAGGTTTCCAAGATCAAACTCGACTTCTCTCTGAGTCCATTGTACGGACTGTATCCGAATCAATGGGCAATTCATCCTGTAGTGTATCTGAGTTAGAACTCTGTAGAGATGATTCGGCAGCGCTTAATTTCAAATTAATCGCCATTGCCTCGATTCTCACATCGGGAGTTTTGGGAATTGCCATTCCGTTATTCGGCAGACATCGCCGGTTTCTCAAAACGGATGGCAATCTCTTTGTAGCGACTAAGGCGTTTGCTGCCGGCGTGATTCTTGCGACGGCGTTTGTTCATATGCTTCCCGATGGATCGAAAGCTCTCTCCGATCCGTGCTTGCCGGAATTTCCCTGGTCGAAATTCCCCTTCTCTGGATTCTTCGCGATGATGGCGTCGCTTTTGACGCTCCTCGTCGATTTCGTTGGAACTCAGTATTACGAGAGGAAACAGGGGCAGATTCGATTGAAAGAAGAAACGAATCGGGTCGGGTCGGGTTTGGATTCCGGGTTGGAGGCTGGGATTCTCCCGGCCGCCGATTCGAACGTGAAAGTGTTCGGCGAAGAGGATGGCGGCGGGATGCACATCGTCGGAATGCATGCACACGCCGCGCAACACCGTCACAGTCATCCGCAGGGGAAGGATGCATGTGACGGGCACGTGACACTCCATGATCATGGCCATGGTCATTCTCATGGGCTCGACGGCGACGATGACGAAAGCGGTGTACGACATGTCGTTGTTTCCCAGATTTTGGAGCTTGGAATAGTGTCGCATTCAGTGATAATTGGGCTCTCTCTGGGAGTGTCCCACAGCCCATGCACCATAAGACCCTTAATTGCAGCTCTCTCGTTCCATCAATTCTTTGAAGGCTTTGCTCTTGGTGGCTGCATCTCTCAGGCTCAGTTCAACACCCTCTCAACCTCTCTCATGGCTGTGTTTTTCGCTGCCACCACGCCCATTGGGATTGCCATCGGCGCGGCGATCTCCTCCACCTACAACCCGAACAGCTCCGGAGCGTTGGTTGCCGAAGGCATTTTGGACTCTCTATCAGCTGGGATTCTGGTGTATATGGCTTTGGTTGATTTGATTGCTGCTGACTTTCTTAGCAAGAGAATGAGCTGCAATTTTCGACTCCAAATTGTTTCGTATTGTACGCTCTTTCTCGGTGCGGGATTGATGTCGTTGCTCGCGCTATGGGCTTGA 1236 51.29 MLFFEDLWQMLWFEGFQDQTRLLSESIVRTVSESMGNSSCSVSELELCRDDSAALNFKLIAIASILTSGVLGIAIPLFGRHRRFLKTDGNLFVATKAFAAGVILATAFVHMLPDGSKALSDPCLPEFPWSKFPFSGFFAMMASLLTLLVDFVGTQYYERKQGQIRLKEETNRVGSGLDSGLEAGILPAADSNVKVFGEEDGGGMHIVGMHAHAAQHRHSHPQGKDACDGHVTLHDHGHGHSHGLDGDDDESGVRHVVVSQILELGIVSHSVIIGLSLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQAQFNTLSTSLMAVFFAATTPIGIAIGAAISSTYNPNSSGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCTLFLGAGLMSLLALWA 411
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3723601 3725690 - Cp4.1LG07g06020.1 Cpe07g00560 472367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00560 411 Pfam ZIP Zinc transporter 56 408 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Cpe07g00560 411 PANTHER ZIP ZINC/IRON TRANSPORT FAMILY PROTEIN 35 411 - -
Cpe07g00560 411 PANTHER ZINC/IRON TRANSPORTER 35 411 - -
Cpe07g00560 411 TIGRFAM zip: ZIP zinc/iron transport family 40 411 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00560 Cpe-Chr7:3723601 Cpe10g00186 Cpe-Chr10:1089869 1.06E-95 dispersed
Cpe15g00906 Cpe-Chr15:8697039 Cpe07g00560 Cpe-Chr7:3723601 1.31E-76 dispersed
Cpe06g00809 Cpe-Chr6:5174903 Cpe07g00560 Cpe-Chr7:3723601 1.33E-09 transposed
Cpe11g00076 Cpe-Chr11:403673 Cpe07g00560 Cpe-Chr7:3723601 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00560 K14709 - csv:101218224 688.337