Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00568 ATGGAGGAAATGTTCCGAGCGGTTGTCGTGCCATTTAGAGTAGGTAATACCGACATGGCAACTCCCATGGATATCACTAGACTCACTGCTGGTTTGTTATCTGATTCTGTGGCTAAGGCTTCTGACCACTTGACTGAAGTAGGTTCTGATGATTGTAAGAGTTCTAATGGGGAGGAAGAGGTTTTGGTTATGAATGATGACAAGTGCGAAGGAGTTTCGTTGTCGGTCGTGTTGTCTCAAAATAATACCAATTGGGTTGCAGCTGATGAGACGATATCCCATGTAAGTGAGGAAGATGATTCTTTCTCTTTAGAGGGTATATATGATAGCTCGTGTTCGCATTCGGTAGTTAGTGAGACTAGCAGCATTTGTGGTGATGATTTTTTAGGTTCTGAGGTGTCGTATTTCGAAGCATTTGGTTCCAAGGATGTTAGCAGTGTTGAGATTGCAGCTACAGCCAATGTTGAAAGTCTCGAGACTCCGATTGCGAGTTCTTCTTCTGCAGGAGTTAGCCTTGAAGAAGATATTGGAGATGGGTTAGGCATTGATGCATGTAACATGGTTCTCCAGCTTCCTCTTGAGAAAAGAGCAAACGAACCGGTTGGTCGAAGTGTTTTCGAGGTCGATTGTGTTCCTCTTTGGGGATTTACATCCGTTTGTGGAAGAAGACCTGAAATGGAAGATGCAGCCACAGCTGTACCGAGGTTTTCAGAACTTCCTGTCCAAATGCTTATTGGCGACCGAGTTCTTGATGGCTCGAACAAGGCTATAGCTCACCAAACTGTTCATTTTTTTGGAGTCTATGATGGTCATGGTGGCTCTCAGGTCGCGAATTTTTGTCATGAACGTATGCATTTGGCTTTGTCTGAGGAGATAGAACTTGCTAAGCAAGACATAGCTGCTGGCAATATGAAGGATAGTTGCCAAGAGCTATGGAGAAAGGCATTCACCAAATGTTTTCTAAAAGTTGATGCTGAAATTGGAGGGAAACCTGGCGCTGAGCCTGTTGCACCCGAAACTGTAGGATCCACTGCTGTTGTTGCAATCATCTGTGCCTCTCACATTATTGTTGCAAACTGTGGCGACTCGAGAGCAGTTCTTTGTCGTGGGAAGGAGCCTATAGCGTTGTCCGTGGATCACAAACCAAACAGAGAAGATGAATATGAAAGGATTGAAGCTGCTGGAGGAAAGGTCATACAGTGGAACGGATACCGTGTTTTTGGTGTTCTTGCAATGTCGAGATCCATCGGTGATAGATACTTGAAACCATGGATCATCCCGGAGCCAGAAGTGATGTTCCTCCCTCGAGCGAAAGACGACGAATGCCTCATTCTAGCCAGCGATGGTTTGTGGGACGTGATGACGAATGAAGAGGTATGCGACCTGGCTCGGAGACGAATCCTACTCTGGCACAAGAAGAACGGCGTCCCTTCGCCTTCTGAGAGGGGTGTGGGGATCGATCCTGCAGCCCAAGCTGCAGCCGAATACCTCTCGAACCGAGCACTTCAAAAGGGCAGCAAAGACAACATCACACTGAACTCGAGCTTGGTTGACCTGAAAAAACGTTCATTTAACAGCGGGAAGGGGGTGGACTTTCCTATGGTAGTCCCGCCACGGCTAGGACCGTTCGTCCCGTCTCATCTTTCTTTGGCTATCCGTGGCGCGAGGACACGAAGCGATTTCGTTGGCTCAGAAATTTACAAAAACCGCCGCTTCTTCTCCGGCGGCCATTTTGATGGAGTGGTAAAATCTCAATCAATGGGCATCAAGCGAGAGAGTAAAAGGTCGGCTTCTGCAACATCGCCGTGTGCTGATCTTAGGGCTGTATATCACAATTGTTTCAATCGTTGGTACTCGGAGAAGTTTGTAAAAGGTCAATTCGATGAAGAACCCTGCGTCTCCGAATGGCAGAAGTACAGAGCTTGCCTCTCTGAGCATTTGGAAGATAAGAAGCTGAAGCGCTTCTTGGAAGAGGAAACGATTGTTCATTCCTCCATGAAAGCTGAAACGAGTTAA 2016 46.83 MEEMFRAVVVPFRVGNTDMATPMDITRLTAGLLSDSVAKASDHLTEVGSDDCKSSNGEEEVLVMNDDKCEGVSLSVVLSQNNTNWVAADETISHVSEEDDSFSLEGIYDSSCSHSVVSETSSICGDDFLGSEVSYFEAFGSKDVSSVEIAATANVESLETPIASSSSAGVSLEEDIGDGLGIDACNMVLQLPLEKRANEPVGRSVFEVDCVPLWGFTSVCGRRPEMEDAATAVPRFSELPVQMLIGDRVLDGSNKAIAHQTVHFFGVYDGHGGSQVANFCHERMHLALSEEIELAKQDIAAGNMKDSCQELWRKAFTKCFLKVDAEIGGKPGAEPVAPETVGSTAVVAIICASHIIVANCGDSRAVLCRGKEPIALSVDHKPNREDEYERIEAAGGKVIQWNGYRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAKDDECLILASDGLWDVMTNEEVCDLARRRILLWHKKNGVPSPSERGVGIDPAAQAAAEYLSNRALQKGSKDNITLNSSLVDLKKRSFNSGKGVDFPMVVPPRLGPFVPSHLSLAIRGARTRSDFVGSEIYKNRRFFSGGHFDGVVKSQSMGIKRESKRSASATSPCADLRAVYHNCFNRWYSEKFVKGQFDEEPCVSEWQKYRACLSEHLEDKKLKRFLEEETIVHSSMKAETS 671
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 3762139 3766129 + Cp4.1LG07g06090.1 Cpe07g00568 472375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00568 671 Pfam Uncharacterised protein family (UPF0203) 598 659 IPR007918 -
Cpe07g00568 671 PANTHER PROTEIN PHOSPHATASE 2C 6-RELATED 111 522 - -
Cpe07g00568 671 Gene3D - 200 523 IPR036457 -
Cpe07g00568 671 ProSitePatterns PPM-type phosphatase domain signature. 264 272 IPR000222 GO:0043169
Cpe07g00568 671 PANTHER ALPHABET, ISOFORM E-RELATED 111 522 - -
Cpe07g00568 671 ProSiteProfiles Coiled coil-helix-coiled coil-helix (CHCH) domain profile. 600 650 - -
Cpe07g00568 671 SUPERFAMILY PP2C-like 210 512 IPR036457 -
Cpe07g00568 671 SMART PP2C_4 203 517 IPR001932 -
Cpe07g00568 671 CDD PP2Cc 215 511 IPR001932 -
Cpe07g00568 671 Pfam Protein phosphatase 2C 237 510 IPR001932 -
Cpe07g00568 671 ProSiteProfiles PPM-type phosphatase domain profile. 213 517 IPR001932 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00568 Cpe11g00360 CCT
Cpe07g00568 Cpe11g00360 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01059 Cpe-Chr3:8770583 Cpe07g00568 Cpe-Chr7:3762139 4.74E-162 dispersed
Cpe07g00568 Cpe-Chr7:3762139 Cpe18g00401 Cpe-Chr18:5219854 9.38E-82 dispersed
Cpe11g00360 Cpe-Chr11:1979639 Cpe07g00568 Cpe-Chr7:3762139 2.28E-50 transposed
Cpe02g01730 Cpe-Chr2:14166055 Cpe07g00568 Cpe-Chr7:3762139 1.00E-171 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00568 K14497 - csv:101207918 874.774