Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe07g00621 | ATGAGGATTTATGCGATGTCCTCACCACTCTGTTCGTCAATTCGGGCATTGGCACCGCAGTGTTGGCGGCGGACGAACTTGAGATTCTTCATATTGCTTCAATCCAAGAGATGTGTAGGCTTCGCGCCTCGCTTTGTTGCTTGTTTGAGCAGTAATGACGACTCTGTTGCAATCCCCAAACCGGTGCCGCTCGCCTTCGATCCTGTGGAGGAGATGTACGGACTTGGCGTCGATTTAAAACCAAGGAATTCAAATTCCAGCGCTCCTGAACCCAGGTCCTGGTTTGGCCCAAATGGTCAGTATATTAGAGAGCTACCGTGTCCAAGTTGCCGAGGCAGGGGCTATGCGCCGTGTACGGAATGTGGAATTGAAAGATCCCGTGCAGACTGTTCCGTGTGTGATGGAAAGGGTATAGTGACCTGCCACCAATGCTTGGGAGATCGTGTCATATGGGAAGAGTCCATTGATGAACGACCATGGGAGAAAGCACGCTCCACTTCTCCATTAAGAATGAAGGAAGACGATGAAGTTGATAACTTGGAAATAAAGCTGGAAGAAAAGAAGAAATCGAAGCGTGTTTACCAATCACCTCCTCCTGAAGTTGGATTGAAGATCAGCCGATCATTAAAAAGTCTCAATGCCAAAACAGGTCTATTTAGTAAGAGAATGAAGATTATCCATCGTGACCCCACTCTTCATGCCCAGAGAGTGGCTGCAATTAAGAAAGCCAAAGGAAGTGCTGAAGCCAGAAAACGTACTTCTGAAGCTTTGAAAGCATTCTTCAGTGATCCAAAAAATCGTCAAAAGCGGAGCATTGCAATGAAAGGAATAAAATTTTACTGTAAAAACTGTGGACGCGAGGGGCATCGAAGACACTATTGTCCAGAACTTAAGGGTGATTCAATCGATAGGCGATTCAGATGTCGAGTATGTGGGGAGAAGGGCCATAACAGAAGGACCTGTAAGAAGTCTAGGTTGAATGGTAAACCGATGAGCGCAACAATTCAGCATCGTTGCACGATATGTGGTGGTAAGGGTCACAGCAGTAGGAACTGTTCGAAGTCTGGCAATGTGTTGAGCCTGAATTTGATCAAGGGAGATAGGATGACTAATGAAAGCAGCAGAGTGAGGCAGTATCGTTGTAGGATCTGCGAAGAAAATGGTCACAATCGGCGGAATTGTCCCAATATCGACACGAAAGTTAACCATACAAGTCGTAGAAGAACATACAGCTGCAAACTATGTCATGAAAAAGGGCATAACAGTAGAACATGCCCAGTTATAAAGATGAACAATCTGAAGAAAAATCCTCCAGGCTCTGTAAACCAATGA | 1332 | 45.57 | MRIYAMSSPLCSSIRALAPQCWRRTNLRFFILLQSKRCVGFAPRFVACLSSNDDSVAIPKPVPLAFDPVEEMYGLGVDLKPRNSNSSAPEPRSWFGPNGQYIRELPCPSCRGRGYAPCTECGIERSRADCSVCDGKGIVTCHQCLGDRVIWEESIDERPWEKARSTSPLRMKEDDEVDNLEIKLEEKKKSKRVYQSPPPEVGLKISRSLKSLNAKTGLFSKRMKIIHRDPTLHAQRVAAIKKAKGSAEARKRTSEALKAFFSDPKNRQKRSIAMKGIKFYCKNCGREGHRRHYCPELKGDSIDRRFRCRVCGEKGHNRRTCKKSRLNGKPMSATIQHRCTICGGKGHSSRNCSKSGNVLSLNLIKGDRMTNESSRVRQYRCRICEENGHNRRNCPNIDTKVNHTSRRRTYSCKLCHEKGHNSRTCPVIKMNNLKKNPPGSVNQ | 443 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 4294926 | 4307748 | + | Cp4.1LG07g05570.1 | Cpe07g00621 | 472428 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe07g00621 | 443 | SMART | c2hcfinal6 | 380 | 396 | IPR001878 | GO:0003676|GO:0008270 | |
Cpe07g00621 | 443 | SMART | c2hcfinal6 | 411 | 427 | IPR001878 | GO:0003676|GO:0008270 | |
Cpe07g00621 | 443 | SMART | c2hcfinal6 | 280 | 296 | IPR001878 | GO:0003676|GO:0008270 | |
Cpe07g00621 | 443 | SMART | c2hcfinal6 | 338 | 354 | IPR001878 | GO:0003676|GO:0008270 | |
Cpe07g00621 | 443 | SMART | c2hcfinal6 | 307 | 323 | IPR001878 | GO:0003676|GO:0008270 | |
Cpe07g00621 | 443 | Gene3D | - | 278 | 331 | - | - | |
Cpe07g00621 | 443 | ProSiteProfiles | Zinc finger CCHC-type profile. | 281 | 296 | IPR001878 | GO:0003676|GO:0008270 | |
Cpe07g00621 | 443 | ProSiteProfiles | Zinc finger CCHC-type profile. | 380 | 396 | IPR001878 | GO:0003676|GO:0008270 | |
Cpe07g00621 | 443 | Coils | Coil | 170 | 190 | - | - | |
Cpe07g00621 | 443 | PANTHER | ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN | 13 | 365 | - | - | |
Cpe07g00621 | 443 | PANTHER | ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN | 371 | 429 | - | - | |
Cpe07g00621 | 443 | SUPERFAMILY | Retrovirus zinc finger-like domains | 279 | 325 | IPR036875 | GO:0003676|GO:0008270 | |
Cpe07g00621 | 443 | ProSiteProfiles | Zinc finger CCHC-type profile. | 338 | 354 | IPR001878 | GO:0003676|GO:0008270 | |
Cpe07g00621 | 443 | ProSiteProfiles | Zinc finger CCHC-type profile. | 307 | 323 | IPR001878 | GO:0003676|GO:0008270 | |
Cpe07g00621 | 443 | SUPERFAMILY | Retrovirus zinc finger-like domains | 370 | 402 | IPR036875 | GO:0003676|GO:0008270 | |
Cpe07g00621 | 443 | Gene3D | - | 332 | 405 | - | - | |
Cpe07g00621 | 443 | PANTHER | ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN | 13 | 365 | - | - | |
Cpe07g00621 | 443 | PANTHER | ZINC KNUCKLE (CCHC-TYPE) FAMILY PROTEIN | 371 | 429 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe07g00621 | Cpe-Chr7:4294926 | Cpe09g00089 | Cpe-Chr9:523419 | 8.52E-06 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe07g00621 | - | - | csv:101211176 | 732.25 |