Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00622 ATGTCGATCTCTTCTTCCTCCAATTGCTTCATTGACTCTCACCTACTCTGTGATGAGGAATCTTCCGGTATTTTGTCTGGAGAATCGCTGGAGTACTTGACGGATTTTGAATCGGCGGATAGTAGTGAGGATTCTATCGCTGGTTTCATAGAGGACGAGAGGCACTTCGTTCCTGGAATTGATTACTTGTCGCGCTTTCAGTCTCAATCGTTGGACTCTTCCGCTAGAGCTGACTCTGTTGCATGGATTCTCAAGGTTCACTCATATTACGGTTTTCAACCACTCACCGCATACCTCTCCGTGAACTACTTGGATCGTTTCCTTTATTCTCGCCCCTTGCCGGAAACAAATGGGTGGAAGATGCAACTCCTTTCAGTGGCTTGTTTGTCACTTGCAGCAAAAATGGAGGAACCCCTTGTTCCTTCTTTCCTGGATCTCCAGATTGGAGGAGCAAAACATATATTTGAGCCTAGAACAATACGTAGGATGGAGCTTCTTGTGCTGACAACTTTGAATTGGCGGCTGCGATCTGTAACACCCTTGAGCTTTATCGGATTCTTCGCCCACAAAGTTGATCCCAGCGGAACATTTTCCAGTTTTCTCAACTCACGCTCCACAGAAATTATTCTGTCCAATCTTCGAGACGCTAGCTTTCTCGAGTACTGGCCCTCCTGCATCGCTGCCGCAGCCTTACTATGTGCGGCAAATGAAATTCCAAATTTGACCCTGTTGAATCCTGAACACGCCGAGTCTTGGTGCAACGGACTGAGCAAAGAAAAAATTGGTGGGTGTTATCGGCTAATGCAGCAGCCGTTAGCATCGAAAGTGATAGTGCCACTCCGAGTCCGAATCCGAGCTGGGTTGAGGTACATTGACTCATCATCCTCATCCTCCCCACCATCAACATTACCTTTTAAAAGAAGAAAATTGAATAATTGCGTGTACCCAGAAGATGACAAAGAAAATTCCAAACTTAGAGCAGAGCAGTAA 990 46.06 MSISSSSNCFIDSHLLCDEESSGILSGESLEYLTDFESADSSEDSIAGFIEDERHFVPGIDYLSRFQSQSLDSSARADSVAWILKVHSYYGFQPLTAYLSVNYLDRFLYSRPLPETNGWKMQLLSVACLSLAAKMEEPLVPSFLDLQIGGAKHIFEPRTIRRMELLVLTTLNWRLRSVTPLSFIGFFAHKVDPSGTFSSFLNSRSTEIILSNLRDASFLEYWPSCIAAAALLCAANEIPNLTLLNPEHAESWCNGLSKEKIGGCYRLMQQPLASKVIVPLRVRIRAGLRYIDSSSSSSPPSTLPFKRRKLNNCVYPEDDKENSKLRAEQ 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4311074 4314767 - Cp4.1LG07g05510.1 Cpe07g00622 472429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00622 329 Gene3D - 59 176 - -
Cpe07g00622 329 CDD CYCLIN 76 168 IPR013763 -
Cpe07g00622 329 Pfam Cyclin, N-terminal domain 47 175 IPR006671 -
Cpe07g00622 329 PANTHER CYCLIN-D1-1 25 310 - -
Cpe07g00622 329 Gene3D - 50 239 - -
Cpe07g00622 329 ProSitePatterns Cyclins signature. 76 107 IPR006671 -
Cpe07g00622 329 SMART Cyclin_C_2 178 300 IPR004367 -
Cpe07g00622 329 Pfam Cyclin, C-terminal domain 178 272 IPR004367 -
Cpe07g00622 329 SMART cyclin_7 81 169 IPR013763 -
Cpe07g00622 329 PANTHER CYCLINS 25 310 IPR039361 -
Cpe07g00622 329 SUPERFAMILY Cyclin-like 160 273 IPR036915 -
Cpe07g00622 329 SUPERFAMILY Cyclin-like 40 175 IPR036915 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00622 Cpe-Chr7:4311074 Cpe14g00259 Cpe-Chr14:1489945 6.43E-58 dispersed
Cpe10g00898 Cpe-Chr10:5044604 Cpe07g00622 Cpe-Chr7:4311074 3.32E-12 dispersed
Cpe11g00745 Cpe-Chr11:5841771 Cpe07g00622 Cpe-Chr7:4311074 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00622 K18810 - csv:101210686 541.191