Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00646 ATGGCGGGGAAGCCTAGCTCGGTTTCCTTCAGGGTTCCGTACCGGAACCTCCAGGATGCGGAAGTAGAGATGGTGGCTGTCGATGAACAGCAGCTCCAAGGGATTGATCTCAATTCTCCTTCTTCTAGTAGATGTGCCAATGGAAACCCAGACGGTTCGTCGTCAACGCCTCATGTTAGATCTACGCCAAATAGTTTGATTATCTTAATTCTCAGTTGTACTATCGCTGCTGGTGTTCAATTTGGTTGGGCATTACAGCTCTCCTTACTAACTCCCTATATTCAGACACTTGGAATCGAGCATGCATTTTCTTCATTTATTTGGCTTTGCGGTCCCATCACTGGTCTCGTGGTTCAACCATGTGTTGGTATATGGAGTGATAAGTGTTCTTCAAAATATGGAAGGAGGCGTCCCTTTATTCTTGCTGGGTCTTTAATGATAGCAGTTGCTGTGGTGTTGATTGGATTTTCTGCTGACATTGGGTATATACTAGGAGATACGAAGGAACATTGCAGAGTATACAAGGGTACACGAACAAGGGCAGCTATTATATTTGTAATAGGCTTTTGGATGCTTGATCTTGCAAACAATACAGTGCAGGGTCCTGCCCGTGCTCTTCTAGCTGATTTATCAGGTCCTGATCAACACAATGTTGCAAATGCAGTATTTTGTTCATGGATGGCTGTTGGTAATATCCTAGGATTTTCAGCAGGAGCTAGTGGAAACTGGCACAAATGGTTTCCGTTCCTTTTGAGTGATGCTTGCTGTGAAGCCTGTGGAAACCTTAAAGCAGCATTTCTTATCGCTGTGGTTTTTCTAACCATATGTACTCTTGTTACCATATATTTTGCCCATGAAGTTCCACTTACTGCTGTAGATCAACTACCACGTTTATCAGATTCTGCTCCTCTGTTGAATGGGAATGAACAAAGTAGTCCTAATATTGTAAAATCGGAACTTAACAGTCCAAATGGGAGCAATGACAACTATGGCTATCAAAAAGATGTGAATTTGGAATTTTCGAAATCAATAATTGAGGAAAATCACAGTGAAAGTTATTACGATGGTCCTGCAACAGTGGTAGTCAAATTGTTAACCAGTTTAAGGCATTTACCACCGGCCATGCATTCAGTGCTTCTTGTGATGGCTCTTAGCTGGTTATCCTGGTTTCCCTTCTTCTTATTTGATACGGATTGGATGGGAAGGGAAGTGTACCATGGGGACCCAAAAGGAAGTTTGGCTGATGAACAGGTTTATGATCAGGGTGTCAGAGCAGGTGCATTTGGTTTGCTATTGAATTCTGTTGTTCTTGGTATCAGTTCTTTCTTCATAGAGCCGATGTGTCAGCGCATGGGAGCAAGACTTGTCTGGGCAATAAGCAACTTTATTGTGTTTGCATGCATGACGGGAACTACTATTATCAGTTTGATATCTACTACCTGGATTCTGACACTTGAGAGACTGATTTTTACAGGATTGGCTATTGGAGTTCTCAATCTTGCAGTTGTTATTCCCCAGATGATTGTATCACTGGGTGCTGGGCCATGGGATGCATTATTCAGTGGAGGAAACATTCCTGCATTTGCTTTGGCTTCTGTTTGTGCGCTTGCGGCTGGAGTTGTTGCGCTTCTTAGATTGCCTGATCACACCAACAGTTCTTTCAAATCCACAGGCTTTCATTTTGGTTGA 1689 42.87 MAGKPSSVSFRVPYRNLQDAEVEMVAVDEQQLQGIDLNSPSSSRCANGNPDGSSSTPHVRSTPNSLIILILSCTIAAGVQFGWALQLSLLTPYIQTLGIEHAFSSFIWLCGPITGLVVQPCVGIWSDKCSSKYGRRRPFILAGSLMIAVAVVLIGFSADIGYILGDTKEHCRVYKGTRTRAAIIFVIGFWMLDLANNTVQGPARALLADLSGPDQHNVANAVFCSWMAVGNILGFSAGASGNWHKWFPFLLSDACCEACGNLKAAFLIAVVFLTICTLVTIYFAHEVPLTAVDQLPRLSDSAPLLNGNEQSSPNIVKSELNSPNGSNDNYGYQKDVNLEFSKSIIEENHSESYYDGPATVVVKLLTSLRHLPPAMHSVLLVMALSWLSWFPFFLFDTDWMGREVYHGDPKGSLADEQVYDQGVRAGAFGLLLNSVVLGISSFFIEPMCQRMGARLVWAISNFIVFACMTGTTIISLISTTWILTLERLIFTGLAIGVLNLAVVIPQMIVSLGAGPWDALFSGGNIPAFALASVCALAAGVVALLRLPDHTNSSFKSTGFHFG 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 4628819 4634867 + Cp4.1LG07g06510.1 Cpe07g00646 472453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00646 562 Pfam Major Facilitator Superfamily 78 499 IPR011701 GO:0022857|GO:0055085
Cpe07g00646 562 PANTHER SUGAR TRANSPORTER 40 484 - -
Cpe07g00646 562 PANTHER SUGAR TRANSPORTER 492 562 - -
Cpe07g00646 562 PANTHER SUCROSE TRANSPORT PROTEIN SUC3 492 562 - -
Cpe07g00646 562 MobiDBLite consensus disorder prediction 306 329 - -
Cpe07g00646 562 MobiDBLite consensus disorder prediction 36 59 - -
Cpe07g00646 562 CDD MFS_SLC45_SUC 69 544 - -
Cpe07g00646 562 Gene3D MFS general substrate transporter like domains 62 545 IPR036259 -
Cpe07g00646 562 PANTHER SUCROSE TRANSPORT PROTEIN SUC3 40 484 - -
Cpe07g00646 562 SUPERFAMILY MFS general substrate transporter 54 549 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00193 Cpe-Chr7:1211848 Cpe07g00646 Cpe-Chr7:4628819 1.58E-134 dispersed
Cpe07g00646 Cpe-Chr7:4628819 Cpe11g00702 Cpe-Chr11:5080334 4.63E-12 dispersed
Cpe07g00646 Cpe-Chr7:4628819 Cpe02g01353 Cpe-Chr2:11947402 4.66E-120 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00646 K15378 - csv:101205348 933.71