Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00680 ATGCCGATCTCTCCATCCCTTCAACTCCTTCGATTTCCTTCCCAGCCACTATCCTCATCCTCTCACCACCGTCTCATCTCTGATCTTGCCTCTGAATCGCGCTTCTTCCGTTCTCCATGGCTTGCCTCTTTGGCTCCGTTGCGGAACTGCCGGATGAAGCTATCTTCGACAACGAAATGTTTCTCCATGTCCAATGAGGATGAGAATTGGAGTGATTCGGAAGCGTTGGTGTCCGATTTGGACGAAGGGGGAGATCGCGAGGATGATATTGGTGTTCAGCAAGAGAATCCTGTGGCCACTGTTGCTTCTGCGCAGAGGATTGCTTCCTCGTCGCCGAGTGATTATCTGTCGCTGGCGATCCGAGAGCTGGTTTATGAGGTGGTAGAGGTTAAAGCCAATGGAGCCATATCCACTAGGAAGATTAACAGACGCCAGCTGTTGAAGTCAAGTGGGCTTCGTCCACGTGATGTTCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTTCGTGAACATGCTATTTTGCTTAATCTGGGTTCGCTTCGAGCAATAGCTATGCGGGATTGTGTCCTTATATTTGATTATAACCGGTATCCATCTAACTTAAAAGTGGCGCCATATTTATTTGTCATACAAAATTCGACATTGCAATTCTCTTTGCATGATATTTTCAGTCCTGGAGGACAAGCTTTTATTGAATCATTGTTGCCTCGATTGAACCCAAAAAACCTGAATGGAGCGCCAGAAATGCCATTTGAACTTGAGGTTGTTGAAGCTGCATTGCTTTCACGAACACAGCGTTTTGAAAAGCGACTAATGAAAGTAGAACCTCGTGTTCGAGCTCTACTTGAGGTATTGCCCAACAAATTAACTGCTACTGGGTTGGAACAACTTCGTATTAGCAAGCAAACTTTGGTTGAATTAGGTTCCAGGGCAGGGGCTCTCAGACAAATGCTTCTTGATCTTCTGGAGGATCCACAAGAAATACGACGTATCTGTATTATGGGAAGAAATTGCACTCTTAATAAGAGAAGTGATGTTGTGGAGTGCTCTGTTCCGTTGGATAAGCAGATTGCAGATGAAGAGGAAGAAGAAATAGAAATGCTGTTGGAAAATTATCTCCTGAGATGTGAATCTTGTCATGGTCAGGCTGAAAGGCTTCTGGATTCTGCAAAAGAAATGGAAGATTCAATTGCCGTCAATTTGAGCTCGCGGCGACTTGAGGTTAGCAGGGTGGAATTGCTTCTTCAAGTTGGGACATTTTGTGTGGCTGTTGGTGCTTTAGTTGCAGGAATATTTGGCATGAACTTACGATCTTACCTTGAAGAACACGTGTTTGCCTTCTGGTTAACAACAGCTGGGATTATTGTGGGTTCGGTTGTGGCATTCTTTCTCGTTTATTCATATTTCAGAGATAGGAGAATCCTATAA 1449 44.24 MPISPSLQLLRFPSQPLSSSSHHRLISDLASESRFFRSPWLASLAPLRNCRMKLSSTTKCFSMSNEDENWSDSEALVSDLDEGGDREDDIGVQQENPVATVASAQRIASSSPSDYLSLAIRELVYEVVEVKANGAISTRKINRRQLLKSSGLRPRDVRSVDPSLFLTNSMPTLLVREHAILLNLGSLRAIAMRDCVLIFDYNRYPSNLKVAPYLFVIQNSTLQFSLHDIFSPGGQAFIESLLPRLNPKNLNGAPEMPFELEVVEAALLSRTQRFEKRLMKVEPRVRALLEVLPNKLTATGLEQLRISKQTLVELGSRAGALRQMLLDLLEDPQEIRRICIMGRNCTLNKRSDVVECSVPLDKQIADEEEEEIEMLLENYLLRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHVFAFWLTTAGIIVGSVVAFFLVYSYFRDRRIL 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5527678 5538776 - Cp4.1LG07g06800.1 Cpe07g00680 472487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00680 482 CDD Mrs2_Mfm1p-like 127 481 IPR039204 -
Cpe07g00680 482 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 40 204 - -
Cpe07g00680 482 PANTHER MG2+ TRANSPORTER PROTEIN, CORA-LIKE/ZINC TRANSPORT PROTEIN ZNTB-RELATED 231 482 - -
Cpe07g00680 482 Gene3D Magnesium transport protein CorA, transmembrane region 232 413 - -
Cpe07g00680 482 Gene3D - 118 201 - -
Cpe07g00680 482 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 40 204 IPR039204 -
Cpe07g00680 482 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 231 482 IPR039204 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00680 Cpe-Chr7:5527678 Cpe14g00327 Cpe-Chr14:1953465 5.00E-22 dispersed
Cpe20g00717 Cpe-Chr20:6097753 Cpe07g00680 Cpe-Chr7:5527678 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00680 K16075 - csv:101219314 703.36