Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00685 ATGGGTGTGGTTGAAGAGTACTTGCCAGCAATGGCGATGTTGGGAATTCAAGCAATTTATGCCATTGTCACACTCATCTCTAGGGCTGCCCTGTTGGAGGGTATGAGTCCTAGAGTGTTCATCGTTTATAGGCAGGCCTTTGCCACTCTCTCTATTGCACCCATTGCTTATCTCTCCAGGTCGAAATCCATGAAGGTGTCTTTGGACCTCAAGAGCTTTTATCTCATCTTTTTTGCTGCACTTATCGGTTCAACCATGAACCACAATTTTTTCTACGAGGGACTGTTCTTAGCCAGTTCATCATTAGCAACAGCGATGGAGAATCTGATTCCGGCAGTGACGTTTATAATAGCAGCAATGGTCGGAATGGAGAGCGTGAACATGACAAACATGAGGTGCGTGGCCAAGATTGTAGGCACAGTGGTTTGTGTCGGTGGGGCTATGTTCATGGCCCTTCTAAGGGGTCCAAAGCTTCTGAACGCCACACAAGCTTTTGGTGTCAAATCTGCAATATTTGGTGTGGAAAGTGGAACCGATCAGGCTTGGTTGTTGGGGTCACTGAGTCTGTTTGGGAGCTGTTGCTGTTGGTCAATTTGGTTGATATTGCAGGTGCCAGCAATGGCAAGCTATCCTGACAAGCTATCTTTATCAGCATGGACTTGTTTTTTTTCACTCATACAATCAGTGGCTTTCACATTATGGGTAGAGGGAGCCAATTTAGAAACGTGGAAGATTCATTCAACTACTGAACTCATTTGTTACCTCTTCTCAGGGATTTTTGGGTCAGGAGTTGCCTACTTTCTTCAAGCTTGGGGTATTTCAAAGAGAGGACCTGTGTTCTCTGCAGTGTTCAACCCCTTTTGCACCATTATTACCACTATTTTGGCTGCTATATTTCTTCATGAGGAGATTTATACTGGAAGCTTGTTGGGGGGCATGATTGTAATTATTGGATTATATGTGGTTCTTTGGGGGAAAACAAATGATTATACGAAGGAAGAAGACAGACAAAAGTGTAGAGTTGAAACACAAGAAGAGGAGGATTGTGAATCAGCTTCAACTTCGATTGAGACAGATAGCTATAAAGTTGATGTGAGGGAACCCCTTTTGTCTGGGTGTACACATCATATTGACAACTAG 1140 43.77 MGVVEEYLPAMAMLGIQAIYAIVTLISRAALLEGMSPRVFIVYRQAFATLSIAPIAYLSRSKSMKVSLDLKSFYLIFFAALIGSTMNHNFFYEGLFLASSSLATAMENLIPAVTFIIAAMVGMESVNMTNMRCVAKIVGTVVCVGGAMFMALLRGPKLLNATQAFGVKSAIFGVESGTDQAWLLGSLSLFGSCCCWSIWLILQVPAMASYPDKLSLSAWTCFFSLIQSVAFTLWVEGANLETWKIHSTTELICYLFSGIFGSGVAYFLQAWGISKRGPVFSAVFNPFCTIITTILAAIFLHEEIYTGSLLGGMIVIIGLYVVLWGKTNDYTKEEDRQKCRVETQEEEDCESASTSIETDSYKVDVREPLLSGCTHHIDN 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 5720343 5723297 + Cp4.1LG07g06860.1 Cpe07g00685 472492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00685 379 Coils Coil 373 379 - -
Cpe07g00685 379 PANTHER WAT1-RELATED PROTEIN 10 348 - -
Cpe07g00685 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 219 326 - -
Cpe07g00685 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 43 152 - -
Cpe07g00685 379 Pfam EamA-like transporter family 11 147 IPR000620 GO:0016020|GO:0016021
Cpe07g00685 379 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020|GO:0016021
Cpe07g00685 379 PANTHER WAT1-RELATED PROTEIN 10 348 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01274 Cpe-Chr4:10550129 Cpe07g00685 Cpe-Chr7:5720343 1.81E-102 dispersed
Cpe07g00685 Cpe-Chr7:5720343 Cpe11g00587 Cpe-Chr11:3499445 9.88E-166 dispersed
Cpe07g00685 Cpe-Chr7:5720343 Cpe07g00686 Cpe-Chr7:5747943 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00685 - - cmax:111468623 707.212