Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00711 ATGGAGGGCTTTTCGACTTGGAACCAGACAGGTGTGGATGCCCTAATGTCGAGATGCAAACCTGCTGATGATAATGATTCGTTTGATTTTGGAATCTTTAAACAGGCTTTGTCCTCTGGCATTGCGGCATCCAAAAATTTTGTCGGCAAATATTGTTACTGTCTATGGTGGGGCCTACAAAACTTAAGTACGCTTGGGCAGGGGCTTCAAACAAGCACTTATCCGGCTGAAGTGATCTTTTCTATAGCATTGGCTGTACTTGGTCTCATCCTCTTTGCACTTCTTATTGGCAACATGCAGACTTATCTTCAATCTCTCACCATAAGGCTTGAGGAAATGAGGGTGAAAAAGCGTGATTCAGAGCAATGGATGCATCATCGTTTACTGCCACAGGAACTTCGGGAGAGAGTGAGGCGATATGATCAGTACAAGTGGTTGGAGACCCGCGGAGTCGACGAACAGAGTTTGGTTCAAACTCTCCCTAAGGATCTTAGGAGAGATATTAAGCGACATCTTTGTCTCGCTTTAGTAAGAAGGGTTCCTCTGTTTGAAAGCATGGATGAGAGGCTGCTTGATGCTATTTGTGAGCGGCTAAAACCGTGTTTGTTTACAGAGTACACGTACATAGTCCGTGAGGGTGATCCAGTCGATGAGATGCTTTTCATTATACGTGGTCGACTCGAGAGTGTGACTACCGATGGTGGGCGAAGCGGATTTTTCAATCGTACCTTCCTGAAAGAAGGTGATTTTTGTGGTGAAGAGCTTTTGACTTGGGCTCTTGACCCGAAATCTGGTTCGAATCTTCCATCTTCGACAAGGACGGTAAAGGCTATTACAGAGGTTGAGGCTTTCGCCCTCGTCGCTGAAGAGTTGAAATTCGTGGCCAGTCAGTTCAGGCGCCTTCACAGTAGACAGGTGCAACATACGTTTCGATTCTACTCGCAACAATGGAGGACATGGGCTGCTTGCTTCATCCAAGCGGCATGGCGTCGATACTCCAAGAGAAAGACTATGGAACTTCGTCAAAAGGAAGAAGTTGCGGCGGAGGAATCCGAGACATCTCAAACGACGACGACCACAAGCGGAGGAGGCTCTTACAGTATTCGTGCAACTTTCCTAGCTTCTAAATTTGCTGCCAATGCTCTCCGAGGCGTTCAGCGATATCGCAACGCAAAGAGCGCTCAGGAGTTGATAAAATTGCAGAAGCCTCCCGAGCCAGATTTTAGCGCGGATGATGCCGATTGA 1245 47.23 MEGFSTWNQTGVDALMSRCKPADDNDSFDFGIFKQALSSGIAASKNFVGKYCYCLWWGLQNLSTLGQGLQTSTYPAEVIFSIALAVLGLILFALLIGNMQTYLQSLTIRLEEMRVKKRDSEQWMHHRLLPQELRERVRRYDQYKWLETRGVDEQSLVQTLPKDLRRDIKRHLCLALVRRVPLFESMDERLLDAICERLKPCLFTEYTYIVREGDPVDEMLFIIRGRLESVTTDGGRSGFFNRTFLKEGDFCGEELLTWALDPKSGSNLPSSTRTVKAITEVEAFALVAEELKFVASQFRRLHSRQVQHTFRFYSQQWRTWAACFIQAAWRRYSKRKTMELRQKEEVAAEESETSQTTTTTSGGGSYSIRATFLASKFAANALRGVQRYRNAKSAQELIKLQKPPEPDFSADDAD 414
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 5979654 5983664 + Cp4.1LG07g07140.1 Cpe07g00711 472518
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00711 414 CDD CAP_ED 182 313 IPR000595 -
Cpe07g00711 414 SUPERFAMILY Voltage-gated potassium channels 46 145 - -
Cpe07g00711 414 Gene3D Jelly Rolls 180 300 IPR014710 -
Cpe07g00711 414 Gene3D Helix hairpin bin 110 173 - -
Cpe07g00711 414 ProSiteProfiles cAMP/cGMP binding motif profile. 182 266 IPR000595 -
Cpe07g00711 414 ProSiteProfiles IQ motif profile. 318 347 IPR000048 GO:0005515
Cpe07g00711 414 SMART cnmp_10 182 313 IPR000595 -
Cpe07g00711 414 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 411 - -
Cpe07g00711 414 SUPERFAMILY cAMP-binding domain-like 112 302 IPR018490 -
Cpe07g00711 414 MobiDBLite consensus disorder prediction 343 363 - -
Cpe07g00711 414 PANTHER NUCLEOTIDE-GATED ION CHANNEL, PUTATIVE-RELATED 1 411 - -
Cpe07g00711 414 Pfam Ion transport protein 43 108 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Cpe07g00711 414 Pfam Cyclic nucleotide-binding domain 207 292 IPR000595 -
Cpe07g00711 414 Gene3D - 15 107 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00711 Cpe-Chr7:5979654 Cpe05g00607 Cpe-Chr5:3693807 0 dispersed
Cpe09g00035 Cpe-Chr9:216208 Cpe07g00711 Cpe-Chr7:5979654 1.53E-36 dispersed
Cpe11g00844 Cpe-Chr11:6853912 Cpe07g00711 Cpe-Chr7:5979654 1.93E-33 wgd
Cpe18g00596 Cpe-Chr18:6342951 Cpe07g00711 Cpe-Chr7:5979654 9.20E-171 wgd
Cpe04g01281 Cpe-Chr4:10588515 Cpe07g00711 Cpe-Chr7:5979654 3.16E-174 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00711 K05391 - csv:101219180 751.895