Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00755 ATGGGCACATTTCAGAGCTTCCGCAAAGCTTATGGCGCTCTCAAGGACTCCACCAAGGTCGGCCTCGCCAAGGTCAATAGCGAATTCAAGGATTTGGATATCGCCATTGTTAAGGCTACCAATCATGTTGAATGTCCGCCTAAAGAACGTCATGTTCGAAAAATCTTTACGGCGACGTCCGTTGTGAGGCCTCGGGCGGATGTGGCGTATTGCATTCATGCATTGGCGAAGAGATTGTCGAAGACGCGGAACTGGATCGTTGCCTTGAAGACGTTGATAGTTGTACATAGGACATTGAGAGAGGGTGATCCAACTTTCAGGGAAGAACTTCTCAACTATTCACAAAAAGGACACGTTCTCCAAATATCAAATTTTAAGGATGATTCAAGTCCTCTTGGTAGAATGCTCCTCTTCAATTTCTATGAATTTACCAAGTATGCTGATGAGGTGTTCTTCCATAATTTTTACTTTAAATTGTTGCATTATGAAGCTTGGGATTGTTCTGCATGGGTAAGGACCTATGCCCTTTTTCTAGAAGAGCGACTTGAATGTTACAGAGTCTTGAAGTACGATATTGAATCGGAACGTCTAACAAAAACATCGCCAGGATCGACGAAGGTACATAGTAGGACACGCTTGCTGAACTCTGATGAGCTACTGGACCAGCTACCCGCATTGCAGCAGGTTCTCTACCGCCTTATGGGATGTCAGCCAGAAGGAGCAGCGTATAGTAATTATCTTATCCAGTACGCCCTGGCTCTCGTACTCAAAGAGAGCTTTAAAATCTATTGTGCAATAAATGATGGAATAATAAACCTTGTGGACATGTTCTTTGGCATGCCAAGGCATGATGCAGTTAAAGCTCTCAATATATACAAAAGAGCCAGCCACCAGGCTGAAAATCTTGCGGATTTTTATGAATATTGTAAGGGATTGGAACTTGCTAGAACTTTTCAGTTTCCCATATTGAAACAGCCGCCTCCATCATTTCTTGCAACAATGGAAGAATACATAAGAGAAGCACCCCAGACAGCTTCTGTTAATAAGAGACTGGAATACCGAGTGGCAGAGGAGATGACTGAGAAACCGGAAGAGCCTGAGGAACCTGCTGAAATTGAAAAGGAGGTTGAAAATGTTGACAACAAACCTCTTGAGGAAACAGAGGAAGAACCCCAACAGAAAGAAGAGAGCGTCCCTGAACCTCCACCTCTAATAGCAACTGAGGATACAAGTGATTTTCTGGGTCTTAAGGAAATAAATCCTAGGATTGCAGAAATTGAGCATAACAATGCTTTAGCCCTTGCTATAGTTTCAAATGGGAATGATCCGTCTTCTGCAAATCGTGCTTTGAGTGACTTTGGCGGTAGTGGTTGGGAGCTATCCCTTGTTACCACACCAACCAATAATGCTGGTTCAACGGTCGGAAGCAAACTGGTTTTTATCCTTCCCTTCACTTTTCTGATTCATTATTTCTCCTTCAATATTGGAATGCAAGATTCTACACTCTTCTTATCAAAGCTGTGA 1524 43.04 MGTFQSFRKAYGALKDSTKVGLAKVNSEFKDLDIAIVKATNHVECPPKERHVRKIFTATSVVRPRADVAYCIHALAKRLSKTRNWIVALKTLIVVHRTLREGDPTFREELLNYSQKGHVLQISNFKDDSSPLGRMLLFNFYEFTKYADEVFFHNFYFKLLHYEAWDCSAWVRTYALFLEERLECYRVLKYDIESERLTKTSPGSTKVHSRTRLLNSDELLDQLPALQQVLYRLMGCQPEGAAYSNYLIQYALALVLKESFKIYCAINDGIINLVDMFFGMPRHDAVKALNIYKRASHQAENLADFYEYCKGLELARTFQFPILKQPPPSFLATMEEYIREAPQTASVNKRLEYRVAEEMTEKPEEPEEPAEIEKEVENVDNKPLEETEEEPQQKEESVPEPPPLIATEDTSDFLGLKEINPRIAEIEHNNALALAIVSNGNDPSSANRALSDFGGSGWELSLVTTPTNNAGSTVGSKLVFILPFTFLIHYFSFNIGMQDSTLFLSKL 507
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6588215 6591444 - Cp4.1LG07g07620.1 Cpe07g00755 472562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00755 507 PANTHER CLATHRIN ASSEMBLY PROTEIN 163 472 IPR045192 GO:0048268|GO:0072583
Cpe07g00755 507 Pfam ANTH domain 31 340 IPR011417 GO:0005543
Cpe07g00755 507 Gene3D ANTH domain 204 359 IPR014712 GO:0005545|GO:0030136|GO:0030276|GO:0048268
Cpe07g00755 507 SMART enth_2 30 192 IPR013809 -
Cpe07g00755 507 MobiDBLite consensus disorder prediction 375 389 - -
Cpe07g00755 507 SUPERFAMILY GAT-like domain 209 340 - -
Cpe07g00755 507 CDD ANTH_N 32 185 - -
Cpe07g00755 507 Gene3D - 5 192 IPR008942 -
Cpe07g00755 507 PANTHER BNAA02G08290D PROTEIN 1 132 - -
Cpe07g00755 507 PANTHER BNAA02G08290D PROTEIN 163 472 - -
Cpe07g00755 507 SUPERFAMILY ENTH/VHS domain 30 193 IPR008942 -
Cpe07g00755 507 PANTHER CLATHRIN ASSEMBLY PROTEIN 1 132 IPR045192 GO:0048268|GO:0072583
Cpe07g00755 507 MobiDBLite consensus disorder prediction 357 408 - -
Cpe07g00755 507 ProSiteProfiles ENTH domain profile. 24 192 IPR013809 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01385 Cpe07g00755 CCT
Cpe07g00755 Cpe11g00617 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00048 Cpe-Chr1:309502 Cpe07g00755 Cpe-Chr7:6588215 0 dispersed
Cpe01g00926 Cpe-Chr1:5478751 Cpe07g00755 Cpe-Chr7:6588215 0 dispersed
Cpe04g01204 Cpe-Chr4:10189816 Cpe07g00755 Cpe-Chr7:6588215 2.04E-120 dispersed
Cpe07g00755 Cpe-Chr7:6588215 Cpe18g00517 Cpe-Chr18:5884576 5.90E-34 dispersed
Cpe11g00617 Cpe-Chr11:3904621 Cpe07g00755 Cpe-Chr7:6588215 2.73E-27 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00755 K20044 - csv:101204565 764.607