Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00763 ATGAGTTCATTCAAAGGCTCTCCGTTTGGAAGACGGAGTGATGTGGAGTCCGGTAGTAGCAATTCCGGTGAGCCGGAGGAGGAGGAATCATCCAATCCTTTCGCTATTCCAAGAACTAAGCATGCTTCTGTTGACAGACTCCGCCGCTGGAGACAAGCTGCGCTCGTGTTAAATGCTTCTCGTCGATTTCGGTATACTTTAGACTTGAAAAAGGAAGAAGAAAAGAAAGAAGCTTTGAAAAAGATTAGAGCACATGCACAAGCCATACGAGCTGCATATCGCTTTAAAGAGGCTGGGGATCGTCTGAGAGGTTCTTTAGGTTCAGGGCCTTCGAGAGCAGAAGCTCCAAATGGTGATTTTTCTGTTGGGCAAGAGCAACTGGCTGCGTTGGTAAAGGATCGTAATGTTGATAGTCTGGAGGAGCAATATGGAGGGGTTAAAGGGGTGGCAGATATGTTAGAAACGAATTTAGAGAAGGGGATAATTGGAGATGACTCTGATTTACTGAAACGAAGAAACACATATGGTTCAAACACATATCCTCAGAAACCAGGAAGGAGTTTTTGGAGGTTTCTCTGGGAAGCTTGGCAAGATCTTACATTGATCATATTGATGATAGCGGCTGTTGCTTCATTGGTGCTAGGCATAAAGACTGAGGGTATCAAGGAAGGCTGGTATGATGGTGGAAGCATTGCTTTTGCAGTTCTTCTTGTCATTGTTGTAACAGCTATAAGTGACTACCGACAATCTCTTCAATTTCAGAATTTGAATAAGGAAAAGAGGAACATACAAGTGGAGGTTGTTCGAGGTGGTCGTCGAATTGAGGTCTCAATTTATGACATTGTGGTTGGAGATGTTATACCACTCAATATTGGTGATCAGGTCCCTGCTGACGGCATCTTAATTTCTGGACACTCACTTGCAATTGATGAATCAAGCATGACTGGAGAGAGCAAGATCGTTCAAAAGCAGCATGCTAAGGACCCTTTCCTGATGTCTGGATGCAAAGTGGCTGATGGTCATGGCACTATGCTGGTTACAAGTGTTGGAGTTAATACTGAATGGGGTTTGCTTATGGCAAGTATTTCTGAAGACAATGGCGAGGAAACTCCTTTGCAGGTGCGTTTAAATGGTGTGGCAACTTTAATTGGTATTGTTGGACTCTCAATAGCTTTCGCTGTCTTGATTGTGCTCCTCGCAAGATATTTCACTGGTCACACCAAAAATCCAGATGGAAGCCGTCAGTTTATTGCAGGGCAGACAAAAGTTGGTCGTGCCGTTGATGGGGCCATCAAAATTGTCACTATTGCGGTGACCATCGTTGTGGTTGCTGTGCCTGAAGGGCTTCCACTAGCTGTAACATTAACCCTTGCTTACTCAATGAGAAAGATGATGGCAGACAAGGCACTGATGACCATTGTTGAGGCTTATGTTGGTGGGAAGAAGACTGATCCACCAGAGAAGAAGTCAGAGTCATCTTCCATGTTATACTCCTTACTTGTTGAAGGCATTGCTCTGAACTCAAACGGCAGTGTATATGTGCCTGAGAGTGGTGGAGAGGCAGAGGTTACAGGTTCGCCTACAGAAAAGGCTATTCTTAACTGGGGTATCAAGCTGGGAATGAACTTTGAAGCAATAAGAAAGGAATGTGCAATTCTTCACGTTTTCCCCTTCAGCTCAGACAAAAAACGTGGTGGTGTTGCAGGTCAACGGGATAATCAAGTTTATATACATTGGAAAGGTGCTGCTGAGATTGTCTTAGCATCGTGCACGCAGTACATGGATGAGCATGATCATTCTGTCCTACTAGATGAAGATAAGATGACATATTTCAAGAGAGCTATTGAGGATATGGCTTCGCGTAGTTTACGTTGTGTTGCACTTGCATATAGATCTTGTGAACCTGAGAATGTTCCTGACGGTGAAGAACAATTGAGTAAGTGGGCTCTACCAGAAGACGACCTTGTTTTGTTGGCTATAGTTGGTTTGAAGGACCCCTGTCGGCCAGGAGTAAGAGATGCTGTACGACTTTGTCAAAAAGCTGGTGTTAAGGTACGAATGGTCACTGGTGATAATGTCCAAACTGCTAGAGCTATTGCACTGGAATGTGGAATACTTGGTTCAGATTCAGATGCTACTGAACCAAATCTTATTGAAGGAAAAGCATTCCGTGCCCTGACTGATGCCCAAAGAGAGGAAATTGCTGAGAAAATATCAGTGATGGGTCGGTCCTCTCCCAATGATAAGCTTCTCCTTGTGCAAGCCTTGAGAAAGAGAGGACATGTAGTTGCTGTTACTGGAGATGGTACAAATGATGCTCCTGCATTACATGAGGCAGATATTGGCCTTGCAATGGGTATCCAGGGGACAGAAGTTGCTAAAGAAAGCTCAGATATTATTATTTTAGATGACAACTTTGCTTCAGTTGTGAAGGTTGTGAGGTGGGGCCGATCAGTATATGCAAATATTCAGAAATTCATCCAGTTTCAGCTCACTGTCAATGTTGCGGCACTCATTATCAATGTCGTGGCGGCAATATCCTCCGGTGATGTCCCACTAAATGCTGTGCAGCTTTTGTGGGTTAATCTTATTATGGACACTCTCGGCGCATTAGCATTGGCTACTGAACCACCAACCGATCACCTCATGGACAGGACGCCTGTTGGTAGAAGTGAACCTCTTATAACAAATATCATGTGGAGAAACCTGCTGATACAGGCATTTTATCAAGTTACTGTGTTGCTTGTCCTCAACTTTCGTGGTCGAAGTTTGCTTCATTTGAACCACTCTCATGTAGAAGCTATCAAAGTGAAGAATACGTTGATTTTCAATGCATTTGTGCTTTGTCAAGTTTTTAATGAATTTAACGCTCGAAAGCCAGATGAGAAGAATATATTCAAAGGAGTCAATAAAAATTACCTCTTTATTGGGATCATTGGAATTACTCTTGTGCTCCAGGTTATAATAATCGAGTTTCTGGGGAAATTCACATCCACAGTCAGACTTAATTGGAAGTATTGGATTATTTCCATAATCATTGGTGTTATCAGTTGGCCCCTAGCTCTCCTTGGGAAATTTATACCTGTTCCTGAAACTCCCTTCCATGTGCTTATTATCAGAATCTTCCGTAAACGACGAGCTGGGAGATCGTAA 3153 43.29 MSSFKGSPFGRRSDVESGSSNSGEPEEEESSNPFAIPRTKHASVDRLRRWRQAALVLNASRRFRYTLDLKKEEEKKEALKKIRAHAQAIRAAYRFKEAGDRLRGSLGSGPSRAEAPNGDFSVGQEQLAALVKDRNVDSLEEQYGGVKGVADMLETNLEKGIIGDDSDLLKRRNTYGSNTYPQKPGRSFWRFLWEAWQDLTLIILMIAAVASLVLGIKTEGIKEGWYDGGSIAFAVLLVIVVTAISDYRQSLQFQNLNKEKRNIQVEVVRGGRRIEVSIYDIVVGDVIPLNIGDQVPADGILISGHSLAIDESSMTGESKIVQKQHAKDPFLMSGCKVADGHGTMLVTSVGVNTEWGLLMASISEDNGEETPLQVRLNGVATLIGIVGLSIAFAVLIVLLARYFTGHTKNPDGSRQFIAGQTKVGRAVDGAIKIVTIAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALMTIVEAYVGGKKTDPPEKKSESSSMLYSLLVEGIALNSNGSVYVPESGGEAEVTGSPTEKAILNWGIKLGMNFEAIRKECAILHVFPFSSDKKRGGVAGQRDNQVYIHWKGAAEIVLASCTQYMDEHDHSVLLDEDKMTYFKRAIEDMASRSLRCVALAYRSCEPENVPDGEEQLSKWALPEDDLVLLAIVGLKDPCRPGVRDAVRLCQKAGVKVRMVTGDNVQTARAIALECGILGSDSDATEPNLIEGKAFRALTDAQREEIAEKISVMGRSSPNDKLLLVQALRKRGHVVAVTGDGTNDAPALHEADIGLAMGIQGTEVAKESSDIIILDDNFASVVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAISSGDVPLNAVQLLWVNLIMDTLGALALATEPPTDHLMDRTPVGRSEPLITNIMWRNLLIQAFYQVTVLLVLNFRGRSLLHLNHSHVEAIKVKNTLIFNAFVLCQVFNEFNARKPDEKNIFKGVNKNYLFIGIIGITLVLQVIIIEFLGKFTSTVRLNWKYWIISIIIGVISWPLALLGKFIPVPETPFHVLIIRIFRKRRAGRS 1050
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6709252 6735478 + Cp4.1LG07g07660.1 Cpe07g00763 472570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00763 1050 Coils Coil 69 89 - -
Cpe07g00763 1050 Pfam E1-E2 ATPase 263 465 - -
Cpe07g00763 1050 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 732 846 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe07g00763 1050 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 231 403 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe07g00763 1050 Gene3D - 667 782 IPR023214 -
Cpe07g00763 1050 MobiDBLite consensus disorder prediction 1 38 - -
Cpe07g00763 1050 MobiDBLite consensus disorder prediction 1 28 - -
Cpe07g00763 1050 CDD P-type_ATPase_Ca_PMCA-like 168 899 - -
Cpe07g00763 1050 Gene3D - 168 363 - -
Cpe07g00763 1050 PANTHER CALCIUM-TRANSPORTING ATPASE 20 470 - -
Cpe07g00763 1050 PANTHER CALCIUM-TRANSPORTING ATPASE 470 1039 - -
Cpe07g00763 1050 PRINTS P-type cation-transporting ATPase superfamily signature 659 670 - -
Cpe07g00763 1050 PRINTS P-type cation-transporting ATPase superfamily signature 766 785 - -
Cpe07g00763 1050 PRINTS P-type cation-transporting ATPase superfamily signature 681 691 - -
Cpe07g00763 1050 PRINTS P-type cation-transporting ATPase superfamily signature 790 802 - -
Cpe07g00763 1050 PRINTS P-type cation-transporting ATPase superfamily signature 310 324 - -
Cpe07g00763 1050 SMART Cation_ATPase_N_a_2 142 216 IPR004014 -
Cpe07g00763 1050 SUPERFAMILY Calcium ATPase, transmembrane domain M 141 1029 IPR023298 -
Cpe07g00763 1050 Gene3D - 42 98 - -
Cpe07g00763 1050 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 471 671 IPR023299 GO:0000166
Cpe07g00763 1050 SUPERFAMILY HAD-like 609 871 IPR036412 -
Cpe07g00763 1050 SUPERFAMILY Calcium ATPase, transduction domain A 263 360 IPR008250 -
Cpe07g00763 1050 Pfam Cation transporter/ATPase, N-terminus 143 211 IPR004014 -
Cpe07g00763 1050 Pfam Ca2+-ATPase N terminal autoinhibitory domain 32 74 IPR024750 GO:0005516
Cpe07g00763 1050 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 495 1029 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Cpe07g00763 1050 Pfam haloacid dehalogenase-like hydrolase 654 780 - -
Cpe07g00763 1050 Pfam Cation transport ATPase (P-type) 511 592 - -
Cpe07g00763 1050 Pfam Cation transporting ATPase, C-terminus 851 1027 IPR006068 -
Cpe07g00763 1050 Gene3D - 194 471 - -
Cpe07g00763 1050 PANTHER CATION TRANSPORTING ATPASE 20 470 - -
Cpe07g00763 1050 PANTHER CATION TRANSPORTING ATPASE 470 1039 - -
Cpe07g00763 1050 Gene3D - 474 666 IPR023299 GO:0000166
Cpe07g00763 1050 Gene3D - 783 1031 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00763 Cpe-Chr7:6709252 Cpe13g00519 Cpe-Chr13:5307701 0 dispersed
Cpe07g00954 Cpe-Chr7:8657439 Cpe07g00763 Cpe-Chr7:6709252 0 transposed
Cpe15g00693 Cpe-Chr15:7479062 Cpe07g00763 Cpe-Chr7:6709252 1.13E-87 transposed
Cpe17g00412 Cpe-Chr17:3084095 Cpe07g00763 Cpe-Chr7:6709252 0 transposed
Cpe17g00875 Cpe-Chr17:6800597 Cpe07g00763 Cpe-Chr7:6709252 0 transposed
Cpe11g00645 Cpe-Chr11:4243340 Cpe07g00763 Cpe-Chr7:6709252 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00763 K01537 - csv:101211703 1800.02