Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00777 ATGTTGGAGGGTGGTCAAAAATTCACTGGAATGATCGATTTGAACGAGCATGCATATGATCTATCGCAAGGGTTTTACCATAAACTTGGTGAGGGAACCAACATGTCTATTGACTCGTTTGCAAGCTTGCAAACGAGCAACGATGGAGGGTCTGTTGCTATGTCTTTAGATAACAGCAGTGTGGGATCAAATGAATCCCACACTCGGATCTTAAATCACCAAGGTCTGCGACGGCGTGCAAATGACAACCAGACTTTTCAACATAGTGTTAACCGTCGTGGAAGAGTTACACACCACCTGAGTGATGATGCACTGGCCCGAGCTTTATTTGATACTAATACACCGACCCAGGGTCTTGAAAATTTTGAGAAGTGGATTCTTGATTTAAGGAAGCTCAATATGGGGGAGGCTTTTGCTCAAGGTGCCTTTGGAAAACTGTACAGAGGTACTTATGATGGGGAAGATGTTGCTATCAAGATCTTGGAGAGGCCTGAGAATGACCTGGAGAAGGCCCAGTTAATGGAGCAACAATATCAGCAGGAGGTGATGATGCTTGCTACTCTGAAGCACCCAAACATTGTCAGGTTTATTGGAGCATGTCATAAGCCAATGGTTTGGTGCATTGTTACTGAATATGCAAAGGGTGGTTCAGTTCGACAGTTCCTGATGAAGCGACAAAGTCGCTCTGTCCCCCTGAAATTAGCTGTCAAACAAGCTTTGGATGTTGCCAGAGGGATGGAATATGTTCATGGCCTTGGATTGATTCACAGGGACTTGAAATCAGACAATCTTTTGATTTTTGCAGATAAGTCCATCAAAGTTGCTGACTTTGGAGTGGCCCGGATTGAAGTGCAGACTGAGGGAATGACACCCGAGACTGGAACCTACCGCTGGATGGCTCCGGAGATGATCCAACACAGGCCTTACACTCAAAAGGTGGACCTGTACAGCTTTGGCATTGTTCTCTGGGAGCTGATAACTGGAATGCTTCCATTCCAGAACATGACTGCCGTTCAGGCCGCCTTTGCAGTTGTCAACAAGGGTGTCCGTCCAATCATTCCCAATGATTGCTTACCTGTTTTGAGCGACATCATGACCCGATGCTGGGATGCCAACCCCGATGTTAGGCCATCATTTACTGAGGTTGTCAGAATGCTTGAGAATGCACAGAATGAGATCATGACAACCGTGCGCAAGGCTCGTTTCAGGTGTTGCATGAGGCAGCCAATGACAACAGACTGA 1242 46.46 MLEGGQKFTGMIDLNEHAYDLSQGFYHKLGEGTNMSIDSFASLQTSNDGGSVAMSLDNSSVGSNESHTRILNHQGLRRRANDNQTFQHSVNRRGRVTHHLSDDALARALFDTNTPTQGLENFEKWILDLRKLNMGEAFAQGAFGKLYRGTYDGEDVAIKILERPENDLEKAQLMEQQYQQEVMMLATLKHPNIVRFIGACHKPMVWCIVTEYAKGGSVRQFLMKRQSRSVPLKLAVKQALDVARGMEYVHGLGLIHRDLKSDNLLIFADKSIKVADFGVARIEVQTEGMTPETGTYRWMAPEMIQHRPYTQKVDLYSFGIVLWELITGMLPFQNMTAVQAAFAVVNKGVRPIIPNDCLPVLSDIMTRCWDANPDVRPSFTEVVRMLENAQNEIMTTVRKARFRCCMRQPMTTD 413
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 6873917 6878085 - Cp4.1LG07g07730.1 Cpe07g00777 472584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00777 413 PANTHER SERINE-THREONINE PROTEIN KINASE 2 404 - -
Cpe07g00777 413 SUPERFAMILY Protein kinase-like (PK-like) 117 386 IPR011009 -
Cpe07g00777 413 ProSiteProfiles Protein kinase domain profile. 132 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00777 413 SMART serkin_6 132 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00777 413 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Cpe07g00777 413 CDD STKc_MAP3K-like 139 386 - -
Cpe07g00777 413 Gene3D Phosphorylase Kinase; domain 1 121 214 - -
Cpe07g00777 413 Pfam Protein tyrosine and serine/threonine kinase 133 386 IPR001245 GO:0004672|GO:0006468
Cpe07g00777 413 Gene3D Transferase(Phosphotransferase) domain 1 215 410 - -
Cpe07g00777 413 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 2 404 - -
Cpe07g00777 413 PRINTS Tyrosine kinase catalytic domain signature 210 223 IPR001245 GO:0004672|GO:0006468
Cpe07g00777 413 PRINTS Tyrosine kinase catalytic domain signature 248 266 IPR001245 GO:0004672|GO:0006468
Cpe07g00777 413 PRINTS Tyrosine kinase catalytic domain signature 294 304 IPR001245 GO:0004672|GO:0006468
Cpe07g00777 413 PRINTS Tyrosine kinase catalytic domain signature 313 335 IPR001245 GO:0004672|GO:0006468
Cpe07g00777 413 PRINTS Tyrosine kinase catalytic domain signature 357 379 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00777 Cpe-Chr7:6873917 Cpe09g01031 Cpe-Chr9:9064342 3.47E-100 dispersed
Cpe08g00290 Cpe-Chr8:1850656 Cpe07g00777 Cpe-Chr7:6873917 5.32E-22 dispersed
Cpe15g00613 Cpe-Chr15:6819267 Cpe07g00777 Cpe-Chr7:6873917 2.67E-62 dispersed
Cpe11g00660 Cpe-Chr11:4407567 Cpe07g00777 Cpe-Chr7:6873917 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62514 PF07714 PK_Tyr_Ser-Thr 9.30E-66 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00777 - - csv:101213713 818.92