Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00798 ATGGGGACAGAGCTTATACGAGTTTCTGTGGAAGAAGATAGTGATGACTTTCCATCAGTTCCACCAGGTTTCGAGTCATATATATCATTTCCTCTAGGGAAAGTGCACAATCATGAAAAAGCTCACGTCCCAGTTAGTTTGCCGACCATCTCCGAGTCACAACCAGTTAAAGTGGAAACTGAGGTAGAAATTGCCGATGTTCCAAAAGTAACAAGGGCCCTCCGACGTAAACCATGTATAAACTACAGACAATTTGAGTACTGTTCCGACGACAAGCTTGATACTAAGCGCGTTGATCAGAATTTTTCGTCAAGGCCGCCTCTTTCGAAGGGGGTCATCCGTGGATGTCCTCAATGTAATAATTGCCAAAAGGTTGTTGCGAGATGGCGTCCAGAAGAATCCTGCCGGCCGGACCTTGAGGCCGCTCCTGTGTTTTACCCAAATGAAGAGGAATTTGAAGATACTTTGACATATATAGCAAGCATACGAACAAAAGCAGAACCATATGGGATTTGTCGTATTGTCCCGCCATCTTCTTGGAAACCTCCATGCCCGCTGAAGCAGAAACATATTTGGGAGAATTCTAAATTTGCAACTCGTGTCCAAAGGATCGATAAGCTTCAGAATCGGGATTCAATAAGAAAGAACTTTAGAGTTTGCAATCAAATGAGACGGAAAAGGAGGAGGGTTAATCGAAAGGGGGTTGATGTTACCACCTTAAATGGAAAAAATGAAGATGCGGGGTCTCGTGCGACAGAAAGATTTGGATTTGATCCTGGTACAGATTTTACTTTAGAATCGTTTAAAAAATATGCCGATGACTTTAAGTCTCAGTATTTTAGTAAACCACTCCATGATACCGCTAAGGGATGTAATCCCTCCATGCTGCAAGAGAACGAGCATTGGAAACCGTCTGTGGAAAATATTGAGGGTGAATATTGGCGGATGGTAGAGAAGCCAACGGAAGAGATCGAGGTGCTCTATGGGGCTGATTTAGAAACTGGAGAGTTCGGCAGCGGTTTTCCGAAGAGTTGCTGTCAAGAGGGCTATACATCAGATGACGATAAGTATGTAAAATCTGGCTGGAACCTGAATAACTTTCCGAAGCTTCCCGGTTCGGTCCTTAGCTATGAGAGCAGTAATATATCTGGAGTCTTGGTACCATGGCTGTATATTGGGATGTGCTTTTCGTCCTTTTGCTGGCACGTTGAAGATCACCACCTCTACTCTCTGAATTACTTGCACTGGGGAGATCCCAAAGTATGGTACGGAGTTCCAGGAAACGGTGCCGGTAAATTAGAAGAGGCTATGAGAAAGCATTTACCTGATCTCTTCGACGAACAACCCGATTTACTTCATAAATTGGCAAGTTTCTTCCCTAATTTAAAGTGGTGTATTCAGAATCCTGGAGAGTTTGTTTTGACCTTCCCTCGTGCATACCATTCGGGATTCAACAGTGGTTTCAATTGTGCCGAGGCAGTTAATGTAGCTCCGGTTGACTGGTTGCCCCATGGTCAAATCGCCGTAGAATTATATCGTGAGCAGGGACGAAGAACTACTATTTCCCACGATAAACTATTGCTCGGTGCAGCGAGGGAAGCTGTGAGAGCACACTGGGAGCTTAATTTACAGAAAAGAAACACTTTGGATAACTTAAGATGGAATAATGTTTGTGGAAAAGATGGAGTCCTAGCAAGAGCATTCAAGACACGTGTTGAGCTGGAGTGTGCACGGAGGAACATTCCGTGCAGTTCTTCTCGGGCAATGAAGATGGAAAGCAACTTTGATGCCTCTAATGAGAGGGAATGCAGTTCATGCCTCTTTGACTTGCATCTATCTGCAGTTGGGTGCCGTTGTTCACCAGATAAGTATGTGTGCTTGAATCATGCAAACCAGTTGTGTTCTTGTGCATGGGAAGAGAAATTTTTTCTCTTTCGTTATGATATCAGTGAATTGAACATACTTCTTGAAGCATTGGAAGGAAAGTTAAGTGCAATATACAGGTGGGCTAGGCAGGATCTCGGTTTGGCGCTTAGTTCATCGAGGGAGTTGAATTCTCAATCATCAACCAAGTCGTTCGTGAATTCTCGGTTGGAAGATTTCTTGATTCGATCTTCATTATTGCCAACTCTAACTGCTATTGACAGCCCGTCTCACCGTGCCGAAAAGGTATCCGAAGTTACTGCTTCATATCTAGAAGATAAGAAGGTAGTTTCTACACTTAATGGATCTGGGAAGGAAGTCGAGCAGAAAAATCGTAAATCTGAGGTGAAAAGCGAAAACCATGAACTCGTGTCAACCAATACAAATGCTCTGAATTTGGTAGAAGCGAAAAGTCGAATGCATAAAACGTGTCCTGAAAATGTCATTCTACTAAGTGATGATGAAGGCGATGAGTATAAGAAGACGATTTCAAATGGTTTAGCTGAAAGTTCCGATCGGTTCGCTGAGGTTGATTCTAAGGCTAGCCTGTGCAACTACAATGAAAATGCAATCTTGCGTACCCCGGTGACCGATGCAACAACCATGGTCGAAAAGGAAGACAGGACATCGAATAGTTGTCAATCGAGCGTTGAACCTTTAAATAATAAACAGTCTCCAAACGCGGTTAGAAATGCAGCTAATGCCGTTCAGAACAATAGTTTTTCAGAAGTCGGATTAGGTCATAGTAATATATTATTTCGAGCTTCAACGGACACTGATTCTCAAAAACCACAAATGTGTAGCTCTGGAAAACCGATCGAGGCTAAGCCGGGAAACGTCGGAACAAGCGCTACTTCTTGTGCTAATGTGGACAGATTCTTGAGGCAAAAGGGTCCTCGAATGGCGAAGGTCGTTCGGAGGATTAACTGCAATGTCGAGCCTTTAGAATATGGAAACGTGATCTCGGGAAAGTCTTGGTCGAACAGTCGGGCCATTTTTCCAAAAGGATTTAAGAGCCGGGTCAAGTATATAAGCGTTTTAGATCCGTCAACTGTATGTTACTACGTTTCTGAAATTCTCGATGTTGGACGGGACGGACCTCTTTTCATGGTTGTTTTGGAGCATTGTCCAAGTGAGGTATTCGTTCATGTTTCTGCTTGCAGATGTTGGGAGTTGGTTAGAAACCGAGTCAATCACGAAATCGCGAAGCAACATAAGTTGGGTCGAACAAATCTCCCTCCTCTACAGCCTCCCGGGAGCTTAGATGGGTTAGAAATGTTCGGGTTTACCTCACCGGCAATTGTTCAGGCCATTGAGGCGATTGATCAAAATCGAGTATGTTGTGAGTATTGGGACTCTCGGCCCTATTCTCGGCCTCGTGTACACAATCCACAACTATCTCAGTCGACAGAAATTAGTCGAAACTTGCAAACAACCGAAAGGAATCACGAGGCCAATCCTAGGCCTAGTAGAGTCGATATAGTACTTAGGGGATTGTTGAAGAAGGCAAACCCGGAAGAACTAAACTCACTCTATACTCTTTTAAATGATAATAGGTCAACAGTTGATCGAGACGTGCTGACTCTTCTTAACGAAGAGATTCAAAGTCATCGCAGATGA 3543 43.72 MGTELIRVSVEEDSDDFPSVPPGFESYISFPLGKVHNHEKAHVPVSLPTISESQPVKVETEVEIADVPKVTRALRRKPCINYRQFEYCSDDKLDTKRVDQNFSSRPPLSKGVIRGCPQCNNCQKVVARWRPEESCRPDLEAAPVFYPNEEEFEDTLTYIASIRTKAEPYGICRIVPPSSWKPPCPLKQKHIWENSKFATRVQRIDKLQNRDSIRKNFRVCNQMRRKRRRVNRKGVDVTTLNGKNEDAGSRATERFGFDPGTDFTLESFKKYADDFKSQYFSKPLHDTAKGCNPSMLQENEHWKPSVENIEGEYWRMVEKPTEEIEVLYGADLETGEFGSGFPKSCCQEGYTSDDDKYVKSGWNLNNFPKLPGSVLSYESSNISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYLHWGDPKVWYGVPGNGAGKLEEAMRKHLPDLFDEQPDLLHKLASFFPNLKWCIQNPGEFVLTFPRAYHSGFNSGFNCAEAVNVAPVDWLPHGQIAVELYREQGRRTTISHDKLLLGAAREAVRAHWELNLQKRNTLDNLRWNNVCGKDGVLARAFKTRVELECARRNIPCSSSRAMKMESNFDASNERECSSCLFDLHLSAVGCRCSPDKYVCLNHANQLCSCAWEEKFFLFRYDISELNILLEALEGKLSAIYRWARQDLGLALSSSRELNSQSSTKSFVNSRLEDFLIRSSLLPTLTAIDSPSHRAEKVSEVTASYLEDKKVVSTLNGSGKEVEQKNRKSEVKSENHELVSTNTNALNLVEAKSRMHKTCPENVILLSDDEGDEYKKTISNGLAESSDRFAEVDSKASLCNYNENAILRTPVTDATTMVEKEDRTSNSCQSSVEPLNNKQSPNAVRNAANAVQNNSFSEVGLGHSNILFRASTDTDSQKPQMCSSGKPIEAKPGNVGTSATSCANVDRFLRQKGPRMAKVVRRINCNVEPLEYGNVISGKSWSNSRAIFPKGFKSRVKYISVLDPSTVCYYVSEILDVGRDGPLFMVVLEHCPSEVFVHVSACRCWELVRNRVNHEIAKQHKLGRTNLPPLQPPGSLDGLEMFGFTSPAIVQAIEAIDQNRVCCEYWDSRPYSRPRVHNPQLSQSTEISRNLQTTERNHEANPRPSRVDIVLRGLLKKANPEELNSLYTLLNDNRSTVDRDVLTLLNEEIQSHRR 1180
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7116516 7126940 - Cp4.1LG07g08000.1 Cpe07g00798 472605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00798 1180 MobiDBLite consensus disorder prediction 1101 1124 - -
Cpe07g00798 1180 Pfam F/Y-rich N-terminus 959 1000 IPR003888 GO:0005634
Cpe07g00798 1180 MobiDBLite consensus disorder prediction 742 764 - -
Cpe07g00798 1180 PANTHER JUMONJI 14-RELATED 756 1177 - -
Cpe07g00798 1180 PANTHER JUMONJI 14-RELATED 87 709 - -
Cpe07g00798 1180 SMART fyrc_3 1009 1103 IPR003889 GO:0005634
Cpe07g00798 1180 Pfam C5HC2 zinc finger 603 653 IPR004198 -
Cpe07g00798 1180 Gene3D - 952 1089 - -
Cpe07g00798 1180 Pfam F/Y rich C-terminus 1007 1091 IPR003889 GO:0005634
Cpe07g00798 1180 ProSiteProfiles JmjC domain profile. 356 513 IPR003347 -
Cpe07g00798 1180 ProSiteProfiles FYR domain FYRC motif profile. 1005 1095 IPR003889 GO:0005634
Cpe07g00798 1180 ProSiteProfiles JmjN domain profile. 142 183 IPR003349 -
Cpe07g00798 1180 SMART cupin_9 356 513 IPR003347 -
Cpe07g00798 1180 PANTHER LYSINE-SPECIFIC DEMETHYLASE 756 1177 - -
Cpe07g00798 1180 PANTHER LYSINE-SPECIFIC DEMETHYLASE 87 709 - -
Cpe07g00798 1180 SUPERFAMILY Clavaminate synthase-like 357 540 - -
Cpe07g00798 1180 SMART fyrn_3 959 1003 IPR003888 GO:0005634
Cpe07g00798 1180 SMART JmjN_1 141 182 IPR003349 -
Cpe07g00798 1180 ProSiteProfiles FYR domain FYRN motif profile. 945 1003 IPR003888 GO:0005634
Cpe07g00798 1180 MobiDBLite consensus disorder prediction 747 761 - -
Cpe07g00798 1180 MobiDBLite consensus disorder prediction 1100 1128 - -
Cpe07g00798 1180 Pfam JmjC domain, hydroxylase 389 496 IPR003347 -
Cpe07g00798 1180 Pfam jmjN domain 143 176 IPR003349 -
Cpe07g00798 1180 MobiDBLite consensus disorder prediction 898 922 - -
Cpe07g00798 1180 Gene3D Cupin 127 497 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00798 Cpe-Chr7:7116516 Cpe20g00587 Cpe-Chr20:3572938 0 dispersed
Cpe17g00909 Cpe-Chr17:7033221 Cpe07g00798 Cpe-Chr7:7116516 4.39E-179 transposed
Cpe11g00682 Cpe-Chr11:4718880 Cpe07g00798 Cpe-Chr7:7116516 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49777 PF02373 JmjC 9.60E-34 CL0029 Cpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00798 - - csv:101208186 1945.24