Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00817 ATGGCCACTCTTTCCTGCCAACCCTCCGACTTGGCCACCCTCCTCGGCTCGACCGCCACCGCCAACTCCTCCGCCGTGGCCGACTACCTCTGCTCGAGGTTCAACACGGTTGCCGCCACTCTCACGTCCACCTCCTACGCCCTCGACAACACCTACCTTCTCTTCTCTGCCTACCTCGTCTTCGCCATGCAACTTGGCTTCGCCATGCTATGCGCTGGCTCGGTCCGTGCCAAGAACACCATGAACATCATGCTCACCAACGTCCTCGACGCCGCTGCCGGTGGCCTCTCGTACTACCTCTTCGGCTTCGCCTTCGCCTTTGGTGCCCCGTCTAACTCCTTCATCGGTCGCCACTTTTTTGGCCTCTCCCATTTCCCTAACCCCTCCACTGATTATAGCTTCTTTCTTTACCAATGGGCCTTTGCTATTGCTGCCGCATGCATCACAAGCGGTTCAATAGCCGAGCGAACCCAATTCGTAGCCTACCTCATTTACTCGACCGTCCTAACCGGTTTTGTCTACCCCATAGTCTCCCACTGGTTCTGGTCGGCCGATGGCTGGGCTAGCGCGGCTCGACCCAGTAACCTCCTATTCAACTCAGGCGCAATCGACTTCGCTGGGTCAGGCGTGGTCCACATGGTCGGCGGCATAGCCGGCTTGTGGGGCGCCTTAATCGAAGGCCCACGAATCGGCCGATTCGACCGTTCAGGCCGGTCCGTAGCTCTACGTGGCCATAGCGCTTCCTTAGTCGTCCTCGGTTCATTCCTCCTCTGGTTCGGCTGGTACGGGTTCAACCCCGGTTCGTTTCTAACTATCTCCAAATCCTACAACGACGGCCGCCCTTATTACGGCCAATGGAGCGCCATAGGCCGAACCGGAGTCACGACAACATTAGCCGGATGCACAGCCGCGCTAACAACGCTCTTCTCAAAACGGCTGTTAGTTGGACATTGGAACGTAATCGACGTGTGCAACGGCTTATTAGGTGGCTTCGCAGCCATCACAGCCGGCTGCGCCGTAGTGGACCCATGGGCGGCTGTGATATGTGGATTCGTAGCGGCTTGGATTCTAATTGGCTTCAACAAGCTAGCCGAGAAGTGCAGCTACGATGACCCATTAGAGGCAGCGCAACTCCACGGCGGATGTGGCGCGTGGGGGTTGATATTCACGGGATTATTCGCGAGAAAGGAGTACGTGGCGGAGGTTTATAAGGCAGGGCGGCCGTTTGGGTTGTTTATGGGCGGCGGAGGGAGGCTACTGGCGGCGCAATTGGTGGAGATAGCGGCGATTGTGGGGTGGGTGTCGGTGACGATGGGGGGATTGTTTTATGGGCTGAAGAAGGCGAAATTGCTGAGGATATCGAGGGAGGATGAGATGGCAGGGATGGATATGACGAGGCATGGGGGGTTTGCTTACGTGTACAATGACGAGGATGATCCGTCTGGGAAGCCGGCTGGGTTTATGCTGAGGAGGATTGAGCCAGCCGATGGGAGTCCTAGTCCTGTTGACGACCGTTATCCTTCTGGGATGGCTGCCGTTTGA 1542 57.39 MATLSCQPSDLATLLGSTATANSSAVADYLCSRFNTVAATLTSTSYALDNTYLLFSAYLVFAMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGLSYYLFGFAFAFGAPSNSFIGRHFFGLSHFPNPSTDYSFFLYQWAFAIAAACITSGSIAERTQFVAYLIYSTVLTGFVYPIVSHWFWSADGWASAARPSNLLFNSGAIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDRSGRSVALRGHSASLVVLGSFLLWFGWYGFNPGSFLTISKSYNDGRPYYGQWSAIGRTGVTTTLAGCTAALTTLFSKRLLVGHWNVIDVCNGLLGGFAAITAGCAVVDPWAAVICGFVAAWILIGFNKLAEKCSYDDPLEAAQLHGGCGAWGLIFTGLFARKEYVAEVYKAGRPFGLFMGGGGRLLAAQLVEIAAIVGWVSVTMGGLFYGLKKAKLLRISREDEMAGMDMTRHGGFAYVYNDEDDPSGKPAGFMLRRIEPADGSPSPVDDRYPSGMAAV 513
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7351775 7354164 - Cp4.1LG07g08140.1 Cpe07g00817 472624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00817 513 SUPERFAMILY Ammonium transporter 47 453 - -
Cpe07g00817 513 PANTHER AMMONIUM TRANSPORTER 5 505 - -
Cpe07g00817 513 MobiDBLite consensus disorder prediction 492 513 - -
Cpe07g00817 513 ProSitePatterns Ammonium transporters signature. 204 229 IPR018047 GO:0008519|GO:0016020|GO:0072488
Cpe07g00817 513 PANTHER AMMONIUM TRANSPORTER 5 505 - -
Cpe07g00817 513 Pfam Ammonium Transporter Family 52 472 IPR024041 GO:0008519|GO:0016020|GO:0072488
Cpe07g00817 513 TIGRFAM amt: ammonium transporter 49 472 IPR001905 GO:0008519|GO:0016020|GO:0072488
Cpe07g00817 513 Gene3D Ammonium transporter AmtB like domains 28 484 IPR029020 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01554 Cpe-Chr3:12071023 Cpe07g00817 Cpe-Chr7:7351775 0 dispersed
Cpe05g00094 Cpe-Chr5:459595 Cpe07g00817 Cpe-Chr7:7351775 0 dispersed
Cpe07g00817 Cpe-Chr7:7351775 Cpe08g01238 Cpe-Chr8:8977126 1.13E-21 dispersed
Cpe07g00817 Cpe-Chr7:7351775 Cpe17g00239 Cpe-Chr17:1548409 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00817 K03320 K07573 csv:101222356 897.501