Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00841 ATGGATAGCCCGACGACGACGCAAAGCTCAGCTCCTAATTCGTCACCAGTCTCGAATCCTGGTTCGAATGATGAAACCCCACGTGTTAAATTCCTGTGTAGTTTCTTGGGGAATATAATGCCTCGACCCCAAGATAGTAAGCTTCGGTATGTTGGGGGCGAGACGAGGATTGTGAGCGTTCCGAGGGATACGACATATGAGGAGTTGATGATTAAGATGAAGGAACTTTATGAAGGGGCTGCTGTGTTGAAGTACCAGCAACCAGATGAGGATCTTGATGCTCTTGTGTCTGTTGTGAATGATGATGATGTGATTAACATGATGGAAGAGTATGATAAGGTGGGTTCGGGAGACGGGTTCACTAGGCTCAGGATATTCTTGTTTTCGCATCCTGATCAAGATGGTTCTTTGTCGTTTGTCGATGGCGATGAGAGGAATACCGAGAGACGATATGTGGATGCCCTTAATAATTCAAATGACATTAATGATTTTGTTAGACAGCAGCAGCCAGATTCCCCTGTAATCAATGGCATAGACGATGTGCACGGGTCAGAACATTTTTTGAATCCGTTGAATATCGAAGGTAGTCTTCACTCCCAGAGGAGTTGCGAGCCGTTGTCACAATATCACCTGCATCAGCTCACAATTCCTCATGTTGGATCTGGGCAGCAACAACAATCTGTAACTCAAAGGTATGGTGAAATGGAAGCTCCATGGAGTCCTGCTTTACTTTCACCCAGGCATCACGGTCCGTTTGATTCAAGACCAGTCAGCGAATATCCATCTTCTCCATCCGCACGGTACCGTATGCCATTCCCGGAGTTCCCAGATAAATATTTGGAAAGAATGCCTGAAGACTATGCGAGGCAGCAAATGACTCACCAACACATGTATGAACATCAACCGCTATATAACGAGAATGTTGTCTGGATGCCAAATGGAACAATTACTGAAAAGTCAGGTTTTCCGGGTAATATATTACACGGACATGGTGTTCCTGATGCGAATAGTTCTTGTGAAAAGTGCCGAGCCAATTTCCATCGGTATCAAACACCCGTGGAGCAAGCTACGATGTTAAATGGACTTCCTCCTGAATACCCTCAGAATAGGGAGGCCCTGATGCAAAAAGCCGACATGAAGTTTCGTCATGGTAATTTCCCAAATGAGCAAAATATTAACGATCATCGACCTGCTTATAATGACACACCTCCCCACGAGAGAGGATGGATTATGCAGCATCAGATGAGTGTTCGGGGGGGTGACACGAGAGCACATGTTTCTGGAGTGGGACGATTGAATGATCACTACATTGTGGATGGTTCTGGTTCAAATTTTCCTCCTACACAAAGTAATGTAACTGATGGCTACCATGCTTCCCCGAATTTTCATGATGAGGTGTTTCGTGACCCAGTTTTGCCTAGCGGACCGCATATGTGTGTTCCTCCTGCTGAAGATCGTGGCGTTGGCTATATGAATATGTCGTATGGATATGGAGGAGATCTTCCGATGGCACACAGGCAAATCCCGCCTGGAAATGCCTTGTGGCGAAATGTTCAGAATCCATTGCATATTTCTCCCCCTTATGATGGATCCGTTTCCCTTCAGCACGGGAATGCTACTGTAAATCCGGGATATATCAGAGGTATGCAGGAGGGTAGTCCACGGATTCATATCGGCATGGACCACCAAAATCCTTGGAATGAATCCTCACAAAAAATGTTGGGTATCGACGGAGCAACTGGTTCAGAGCATTTACCTCCGCATGTTTCGAAGACTAACTCCACTATTATGGAACATATCCTACCACATCTAGATAAGGTAAACCTGGTCGACTCGTCTGCGCAGTGGTCGGATTCTTCTTCAGGATTTGTTCATGAAAAAGTTGTTGCACCGTTTCATTCTAGCCAAAATCCACAACCGAGTGCGGTTAGTGTGGTTAATGAAGCTATGATGATGGAAAGAAAAATTGTGCCTGTAGAAGGAGACAGACACGTCGTAACCGATATGGGGAAAGTTGACATCGCCGATGTACACACTGTTTCTCATCAAGAGCAGAAAAACACTGATGATACATATTCCAAGGTCGCACCCCCTGAACTGTTAAATTCAAATTGCATGAACGATGCAGTAGAGAACGGTGATAGCTTGGAACCGGCCGAGGAGACTCTAGAAGAGCCAAAACTTTCTGTCGACCGTCTGAGATTTTTACCCGAGTTGATTGCATCTGTGAAGCGAGCAGCATTGGAAGTATCTGAAGGGGCAATGATTGAAGAAACAGCTTCAGGGAGACCTGATTCAATCGACAAAAAAGAGGCTGCAAACGAGAATGCGCACGAGAAACCCGAGTTGGAAACTGAGAATGACAATCAAAGCTCTGGAATTGAGCCAACAAAGGCAGAAGCAGAAGCAATATCAAGAGGATTACAAACGATTAAAAACGATGATCTGGAGGAGATTCGTGAACTCGGGTCGGGAACCTATGGTGCTGTTTATCATGGGAAATGGAGAGGTTCGGATGTCGCAATAAAGAGGATCAAAGCTAGCTGTTTTTCTGGTCGGCCCTCGGAAAGGGAACGTCTGATAGCGGATTTTTGGAAGGAAGCTTTGATGTTAAGTTCTTTACACCATCCAAACGTTGTCGCCTTTTACGGTATCGTTCGTGATGGACCTGATGGGTCCTTAGCAACAGTAACAGAATTCATGGTGAATGGATCGTTGAAACAATTTTTGCACAAGAAGGACAGGACCATCGATCGTCGTAAACGACTCATTATAGCGATGGATGCTGCATTTGGGATGGAGTATTTGCACGGGAAGAACATCGTACATTTCGATTTGAAATGTGAAAACCTTTTAGTGAATATGAGAGACCCTCATAGGCCTGTTTGCAAGATTGGTGATTTGGGATTGTCAAAGGTGAGACAACACACGTTAGTATCGGGAGGGGTTCGCGGAACTTTGCCATGGATGGCACCGGAGCTTCTTAGCGGGAAAAGTAATATGGTCACAGAGAAGATTGATGTTTACTCGTTCGGGATAGTTATGTGGGAACTGCTCACGGGAGACGAACCATATTCAGATATGCATTGTGCTTCTATAATCGGAGGAATCGTGCACAATTCGTTACGTCCAGAAATCCCGACATGGTGCGACCCAGAATGGAAGGCTTTAATGTCGAGCTGTTGGGACTCGGACCCAGCAACGAGGCCATCATTTTCAGAAATCTCTCAGAAGCTAAGGAACATGGCAGCTGCAATGAATGTGAAATAG 3270 45.41 MDSPTTTQSSAPNSSPVSNPGSNDETPRVKFLCSFLGNIMPRPQDSKLRYVGGETRIVSVPRDTTYEELMIKMKELYEGAAVLKYQQPDEDLDALVSVVNDDDVINMMEEYDKVGSGDGFTRLRIFLFSHPDQDGSLSFVDGDERNTERRYVDALNNSNDINDFVRQQQPDSPVINGIDDVHGSEHFLNPLNIEGSLHSQRSCEPLSQYHLHQLTIPHVGSGQQQQSVTQRYGEMEAPWSPALLSPRHHGPFDSRPVSEYPSSPSARYRMPFPEFPDKYLERMPEDYARQQMTHQHMYEHQPLYNENVVWMPNGTITEKSGFPGNILHGHGVPDANSSCEKCRANFHRYQTPVEQATMLNGLPPEYPQNREALMQKADMKFRHGNFPNEQNINDHRPAYNDTPPHERGWIMQHQMSVRGGDTRAHVSGVGRLNDHYIVDGSGSNFPPTQSNVTDGYHASPNFHDEVFRDPVLPSGPHMCVPPAEDRGVGYMNMSYGYGGDLPMAHRQIPPGNALWRNVQNPLHISPPYDGSVSLQHGNATVNPGYIRGMQEGSPRIHIGMDHQNPWNESSQKMLGIDGATGSEHLPPHVSKTNSTIMEHILPHLDKVNLVDSSAQWSDSSSGFVHEKVVAPFHSSQNPQPSAVSVVNEAMMMERKIVPVEGDRHVVTDMGKVDIADVHTVSHQEQKNTDDTYSKVAPPELLNSNCMNDAVENGDSLEPAEETLEEPKLSVDRLRFLPELIASVKRAALEVSEGAMIEETASGRPDSIDKKEAANENAHEKPELETENDNQSSGIEPTKAEAEAISRGLQTIKNDDLEEIRELGSGTYGAVYHGKWRGSDVAIKRIKASCFSGRPSERERLIADFWKEALMLSSLHHPNVVAFYGIVRDGPDGSLATVTEFMVNGSLKQFLHKKDRTIDRRKRLIIAMDAAFGMEYLHGKNIVHFDLKCENLLVNMRDPHRPVCKIGDLGLSKVRQHTLVSGGVRGTLPWMAPELLSGKSNMVTEKIDVYSFGIVMWELLTGDEPYSDMHCASIIGGIVHNSLRPEIPTWCDPEWKALMSSCWDSDPATRPSFSEISQKLRNMAAAMNVK 1089
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 7623623 7629877 + Cp4.1LG07g08340.1 Cpe07g00841 472648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00841 1089 SUPERFAMILY Protein kinase-like (PK-like) 804 1077 IPR011009 -
Cpe07g00841 1089 SMART serkin_6 816 1085 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00841 1089 CDD PB1_UP2 32 128 - -
Cpe07g00841 1089 Gene3D - 47 130 - -
Cpe07g00841 1089 ProSiteProfiles Protein kinase domain profile. 816 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00841 1089 PRINTS Tyrosine kinase catalytic domain signature 898 911 IPR001245 GO:0004672|GO:0006468
Cpe07g00841 1089 PRINTS Tyrosine kinase catalytic domain signature 935 953 IPR001245 GO:0004672|GO:0006468
Cpe07g00841 1089 PRINTS Tyrosine kinase catalytic domain signature 1006 1028 IPR001245 GO:0004672|GO:0006468
Cpe07g00841 1089 PRINTS Tyrosine kinase catalytic domain signature 1050 1072 IPR001245 GO:0004672|GO:0006468
Cpe07g00841 1089 MobiDBLite consensus disorder prediction 1 25 - -
Cpe07g00841 1089 Gene3D Phosphorylase Kinase; domain 1 801 902 - -
Cpe07g00841 1089 SMART PB1_new 43 128 IPR000270 GO:0005515
Cpe07g00841 1089 MobiDBLite consensus disorder prediction 762 786 - -
Cpe07g00841 1089 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 19 1089 - -
Cpe07g00841 1089 MobiDBLite consensus disorder prediction 757 794 - -
Cpe07g00841 1089 Gene3D Transferase(Phosphotransferase) domain 1 903 1089 - -
Cpe07g00841 1089 Pfam PB1 domain 45 128 IPR000270 GO:0005515
Cpe07g00841 1089 CDD STKc_MAP3K-like 822 1079 - -
Cpe07g00841 1089 MobiDBLite consensus disorder prediction 1 26 - -
Cpe07g00841 1089 ProSitePatterns Protein kinases ATP-binding region signature. 822 843 IPR017441 GO:0005524
Cpe07g00841 1089 ProSitePatterns Serine/Threonine protein kinases active-site signature. 941 953 IPR008271 GO:0004672|GO:0006468
Cpe07g00841 1089 Pfam Protein tyrosine and serine/threonine kinase 817 1079 IPR001245 GO:0004672|GO:0006468
Cpe07g00841 1089 PANTHER SERINE-THREONINE PROTEIN KINASE 19 1089 - -
Cpe07g00841 1089 SUPERFAMILY CAD & PB1 domains 45 134 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00841 Cpe11g00598 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00841 Cpe-Chr7:7623623 Cpe08g00383 Cpe-Chr8:2396973 1.87E-24 dispersed
Cpe11g00598 Cpe-Chr11:3580815 Cpe07g00841 Cpe-Chr7:7623623 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62515 PF07714 PK_Tyr_Ser-Thr 1.00E-61 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00841 - - csv:101215475 1875.14