Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe07g00857 | ATGGAAGAGTTTTACAGGCTCAACAGCTCTGTTATATCCTCATACACTAATGGAGTCGTAGCTAGTGAGGCCATTGCAAGCACTAGCTGTGGTGGAGTTCATGGAGCTCAAATGATGAACAATGAAATGATTCAGCTGGAAGCTGAGACCACTACTGGCTTGAACATGTCTGAAATCATCAAAACTCAAATTGTCAACCATCCCCTTTATTGCAAACTGGTTTCTGCTTACATTGAATGCCAAAAAGTTGGAGCTCCACCACAAGTGGCTTGTCTTCTTGAAGAAATTGGTCGTGAAAATCACCCTCCTAGGTCATGTATTGAGCTGGGAGCTGATCCTCAACTCGACAACTTCATGGAGTCATACTGTGAAGTTCTTCATCAATACAAGAATGAGCTAACCAAGCCATTTAATGAAGCAACAATGTTCTTGACCAACATTGAATTGGAGCTAAGCAACCTATGTAAAGGATCATTTACAGCAACGTCGGATTCTCGTCCCGCCACGAACGACGAAGTAGCCGAGACGCCGGAGGACGAACCGGGCAGCTACCGGGAAGTCGAGATGCCGGGAAATCACGAGCCATTCGGCACGAGGCAAACGAACCAAGACCTCAAAGAAATGCTGCTGAAGAAATACAGTGGCTATCTAAGCAGTTTGAAGAAGGATTTCCTTAAAAAAAGGAAGAAAGAGAAGCTTCCAAAGGATGCAAGAATGGCTTTATTTGATTGGTGGAACACTCATTACAAATGGCCATATCCCACAGAAGAGGAAAAATCAAAACTTTCTGGTATTACTGGTTTGGATCAGAAGCAGATCAATAACTGGTTCATTAACCAGCGAAAACGGCATTGGAATCCGCCCGAAGAAATGCGATTCGCGCTCATGGACAGTGTCGGGACCGGGGTCGGGGAATGCATCAAAGGTTCAAATTTTTATGACAATGGAGGAACAGGAGGCCGTGTTGTTTAG | 972 | 44.65 | MEEFYRLNSSVISSYTNGVVASEAIASTSCGGVHGAQMMNNEMIQLEAETTTGLNMSEIIKTQIVNHPLYCKLVSAYIECQKVGAPPQVACLLEEIGRENHPPRSCIELGADPQLDNFMESYCEVLHQYKNELTKPFNEATMFLTNIELELSNLCKGSFTATSDSRPATNDEVAETPEDEPGSYREVEMPGNHEPFGTRQTNQDLKEMLLKKYSGYLSSLKKDFLKKRKKEKLPKDARMALFDWWNTHYKWPYPTEEEKSKLSGITGLDQKQINNWFINQRKRHWNPPEEMRFALMDSVGTGVGECIKGSNFYDNGGTGGRVV | 323 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 7771796 | 7774727 | + | Cp4.1LG07g08480.1 | Cpe07g00857 | 472664 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe07g00857 | 323 | PANTHER | HOMEOBOX PROTEIN KNOTTED-1-LIKE 10 | 1 | 298 | - | - | |
Cpe07g00857 | 323 | SUPERFAMILY | Homeodomain-like | 226 | 296 | IPR009057 | - | |
Cpe07g00857 | 323 | PANTHER | HOMEOBOX PROTEIN TRANSCRIPTION FACTORS | 1 | 298 | - | - | |
Cpe07g00857 | 323 | CDD | homeodomain | 236 | 287 | IPR001356 | GO:0003677 | |
Cpe07g00857 | 323 | Pfam | Homeobox KN domain | 244 | 283 | IPR008422 | GO:0003677|GO:0006355 | |
Cpe07g00857 | 323 | Pfam | KNOX2 domain | 109 | 155 | IPR005541 | GO:0003677|GO:0005634 | |
Cpe07g00857 | 323 | SMART | ELK_2 | 204 | 225 | IPR005539 | GO:0003677 | |
Cpe07g00857 | 323 | SMART | HOX_1 | 226 | 291 | IPR001356 | GO:0003677 | |
Cpe07g00857 | 323 | SMART | KNOX1_2 | 58 | 102 | IPR005540 | GO:0003677|GO:0005634 | |
Cpe07g00857 | 323 | ProSiteProfiles | 'Homeobox' domain profile. | 224 | 287 | IPR001356 | GO:0003677 | |
Cpe07g00857 | 323 | Gene3D | - | 222 | 294 | - | - | |
Cpe07g00857 | 323 | Pfam | KNOX1 domain | 60 | 101 | IPR005540 | GO:0003677|GO:0005634 | |
Cpe07g00857 | 323 | MobiDBLite | consensus disorder prediction | 161 | 199 | - | - | |
Cpe07g00857 | 323 | ProSiteProfiles | ELK domain profile. | 204 | 224 | IPR005539 | GO:0003677 | |
Cpe07g00857 | 323 | SMART | KNOX2_2 | 105 | 156 | IPR005541 | GO:0003677|GO:0005634 | |
Cpe07g00857 | 323 | Pfam | ELK domain | 204 | 225 | IPR005539 | GO:0003677 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe07g00857 | Cpe11g00875 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe07g00857 | Cpe-Chr7:7771796 | Cpe09g00513 | Cpe-Chr9:3419266 | 4.70E-78 | dispersed | |
Cpe13g00185 | Cpe-Chr13:1447129 | Cpe07g00857 | Cpe-Chr7:7771796 | 5.44E-13 | dispersed | |
Cpe11g00875 | Cpe-Chr11:7100812 | Cpe07g00857 | Cpe-Chr7:7771796 | 6.30E-178 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49781 | PF03791 | KNOX2 | 2.70E-21 | No_clan | Cpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe07g00857 | - | - | cmos:111443969 | 611.683 |