Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cpe07g00881 | ATGGGGCATTTCTCCACCATGTTCAATGGTTTAGCAAGGTCATTTTCTTTCAAAAAAGGTAGAAATTCCGGGAATTTAGGCAACGAGGGAGGTCGAGAAGCTGCGAAAGCCATGGTAAAGGAAGCGAAAAAGAAAGACTCGATATTATGCACCTCTGGCTTCCTCAATGCAGATGGCTCGGAGAGTTTTGCTTCGGTGTTCTCGAAACGAGGCAACAAAGGAGTAAACCAAGATTGCTGCATCGTATGGGAGGAATTTGGATGCCAAGACGACATGTTATTTTGTGGAGTTTTCGATGGGCACGGACCGTGGGGTCATTTTGTCGCGAAAACCGTAAGAGAATCGATGCCACCATCGTTGCTGCACCACTGGCAACAAGGACTTGCTCAAGCTTTTCTTGAACCAGAATTGGAGTCGGAAAAGAAGCATCAACGATTCGAGTTATGGAAGCATTCGTTTTTAAGAACTTGTGCTGCTATCGATCACGAGCTCGAGCAGCATCGAAAAATCGATACGGTTTACAGTGGAACAACTGCCCTGTCCATAGTTAAACAGGTATGGGATGTTGTCTCCAACCAAGAAGCAGTCGAGATTGTATCGTCGACACTGGATCGAGCAAAATCATCAAAACGTTTGGTCGAGTGTGCGGTTCGGGCATGGAAACGGAAGAGACGGGGCATTGCGATGGATGATATATCAGCTATCTGCCTCTTCTTCCACTCCTCATCAGATCAAGATCACCTTGTATCCTAG | 753 | 46.35 | MGHFSTMFNGLARSFSFKKGRNSGNLGNEGGREAAKAMVKEAKKKDSILCTSGFLNADGSESFASVFSKRGNKGVNQDCCIVWEEFGCQDDMLFCGVFDGHGPWGHFVAKTVRESMPPSLLHHWQQGLAQAFLEPELESEKKHQRFELWKHSFLRTCAAIDHELEQHRKIDTVYSGTTALSIVKQVWDVVSNQEAVEIVSSTLDRAKSSKRLVECAVRAWKRKRRGIAMDDISAICLFFHSSSDQDHLVS | 250 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 7 | 7926885 | 7930053 | - | Cp4.1LG07g08850.1 | Cpe07g00881 | 472688 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cpe07g00881 | 250 | SUPERFAMILY | PP2C-like | 64 | 183 | IPR036457 | - | |
| Cpe07g00881 | 250 | Gene3D | - | 185 | 247 | IPR036457 | - | |
| Cpe07g00881 | 250 | PANTHER | ALPHABET, ISOFORM E-RELATED | 186 | 247 | - | - | |
| Cpe07g00881 | 250 | PANTHER | CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C | 1 | 185 | - | - | |
| Cpe07g00881 | 250 | SUPERFAMILY | PP2C-like | 186 | 240 | IPR036457 | - | |
| Cpe07g00881 | 250 | SMART | PP2C_4 | 52 | 237 | IPR001932 | - | |
| Cpe07g00881 | 250 | PANTHER | CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C | 186 | 247 | - | - | |
| Cpe07g00881 | 250 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 185 | - | - | |
| Cpe07g00881 | 250 | Gene3D | - | 55 | 184 | IPR036457 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cpe07g00881 | Cpe-Chr7:7926885 | Cpe12g00295 | Cpe-Chr12:1959552 | 3.83E-56 | dispersed | |
| Cpe11g00894 | Cpe-Chr11:7210013 | Cpe07g00881 | Cpe-Chr7:7926885 | 3.04E-31 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cpe07g00881 | - | - | cmax:111493912 | 344.354 |