Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00907 ATGCAAGATATCTTTGCTTCTGTTCGCCGATCATTGGTGTTTCGTGCTAATGTTGAGAATGAGGATTCGCATTCCCCGACAATTGGAGTTGGAGCCCTAGTTGATAAGATTAACTCCAGTATTAGGAAGTCCAGAGTGTTTTCTAGGCACTCGCCATCGTCCTCGGCTCATCCTCCGATTCTCAAGGAAACTGAGCTTCCGATTCGATGGCGCAAGGGCGAGTTGATTGGCTGCGGCGTATATCTTTGCTTCTGTTCGCCGATCATTGGTGTTTCGAAGTCCAGAGTGTTTTCTAGACACTCGCCATCGTCGTCGGCTTATCATCCGATTCTCAAGGAAACTGAGCCTCCGATTCGATGGCGCAAGGGCGAGTTGATTGGCTGCGGCGCCTTTGGTCGGGTGTATATGGGCATGAATCTTGGCTCTGGCGAGCTTCTCGCTGTTAAACAGGTTCTGATTGCTGCAAATGGCGCTTCGAAGGAGAAAGCGCAGGCTCATGTTAAGGAGCTTGAGGAAGAAGTGAAACTTCTAAAGGATCTTTCTCATCCAAATATTGTTAGATACTTGGGCACGGTTAGTGAGGATGATTCTGTAAATATATTATTGGAATTTGTCCCTGGTGGATCAATATCATCACTTTTGGGGAAATTTGGAGCCTTCCCTGAAGCAGTTATAAGAACATATACCAAACAGTTATTACTGGGACTGGAATACTTGCACAAGAATGGTATCATGCACAGGGACATTAAGTTATTACTGGGACTGGAATACTTGCACAAGAATGGTATCATGCACAGGGACATTAAGGGGGCGAATATTCTTGTAGATAACAAGGGATGCATTAAGCTTGCTGATTTTGGTGCATCAAAACAGGTTGTCGAGCTGGCTACAATTTCAGGTGCAAAGTCTATGAAGGGTACTCCATATTGGATGGCTCCTGAAGTAATTCTGCAGACTGGGCATAGTTTCTCTGCGGATATATGGAGTGTTGGATGCACTGTTATTGAGATGGCTACAGGAAAGCCTCCTTGGAGCCAACAGTATCAAGAGGTTGCTGCTCTTTTTCATATTGGCACAACAAAGTCTCATCCACCAATCCCTGAGCAGCTTTCAGTTGAAGCTAAAGATTTTCTGTTGAAATGTTTACAGAAGGAACCCAACTTAAGACCAGCTGCATCTGAACTCCTGAAGCATCCTTTTGTTACTGGGGAGGACCCAGAATCTCTACTTGTATCACGTGATGCATGCACGGAGCCCTTGGATACCCATTCACTTTTATATACTCCCGACCTTGAAATGAGCAAAACTCCAACGCATCCTGGATCAAGTGATATTTGTAATTTGGATAGTCTGAGCTGCTCAAAACTATACACCGCAAACAAACTAGAAAATGATACGTGGGGAACAAACAACAGTGATAATGAAATGTGTCAGATTGATGACAATGATGATTTTATGTTAGATGAAGTAAAACTCAGGTCTTCTATGACATCTGGGAATTTCAAGAGTTATAACCCAATCTGTGAGCCGTCGGATGATGAGGACTGCAAATTTGATCAAAGTTCAGTAGTAAAGCAAGGAAGCGATTTAGATGAGCAAACTCTAGCACCTGGCAGCTGTTCTGAAGTTTTTGATGATGACCAAAACTTCTCATTTCCTAGTGGACGATCACTTTCTGAAGATGAGGATGAGCTTACTGAATCAAAAATTAAAGCATTCTTGGATAAGAAGGCTCTTGAATTGAAGAAACTGCAGTCACCACTATATGAGGAGTTTTACAATAATAGTTTGAATGCATCCTGCTCTCCAGTTTTTGTAGAGAGTAAACAAGATGAAACTACTCCTAAATACTTGAAATTGCCCCCAAAAAGTCGGTCACCAAGTCGAAGTCCCGGTCATCTATCCCCAGCATTCGATGCCTTTGGCACTGGGACTCCAGGGAGTGATAGCAGCAGCAGGGGTAATGCAAATGATCAGAGGTCACAACTCAATGATTGGAAAGGACTTCTAGTTGATGGTCAGCCCGAAGCTGGTAGTCCGAGTAAACACTATTCTGAAATACAGAGGAAGTGGAAAGAAGAGCTTGATCAAGAGCTCGAGAGGAAACGAGTCCTTGTGGAGTGTATGAAGTGA 2133 43.65 MQDIFASVRRSLVFRANVENEDSHSPTIGVGALVDKINSSIRKSRVFSRHSPSSSAHPPILKETELPIRWRKGELIGCGVYLCFCSPIIGVSKSRVFSRHSPSSSAYHPILKETEPPIRWRKGELIGCGAFGRVYMGMNLGSGELLAVKQVLIAANGASKEKAQAHVKELEEEVKLLKDLSHPNIVRYLGTVSEDDSVNILLEFVPGGSISSLLGKFGAFPEAVIRTYTKQLLLGLEYLHKNGIMHRDIKLLLGLEYLHKNGIMHRDIKGANILVDNKGCIKLADFGASKQVVELATISGAKSMKGTPYWMAPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPEQLSVEAKDFLLKCLQKEPNLRPAASELLKHPFVTGEDPESLLVSRDACTEPLDTHSLLYTPDLEMSKTPTHPGSSDICNLDSLSCSKLYTANKLENDTWGTNNSDNEMCQIDDNDDFMLDEVKLRSSMTSGNFKSYNPICEPSDDEDCKFDQSSVVKQGSDLDEQTLAPGSCSEVFDDDQNFSFPSGRSLSEDEDELTESKIKAFLDKKALELKKLQSPLYEEFYNNSLNASCSPVFVESKQDETTPKYLKLPPKSRSPSRSPGHLSPAFDAFGTGTPGSDSSSRGNANDQRSQLNDWKGLLVDGQPEAGSPSKHYSEIQRKWKEELDQELERKRVLVECMK 710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8123321 8128812 - Cp4.1LG07g09150.1 Cpe07g00907 472714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00907 710 Coils Coil 153 180 - -
Cpe07g00907 710 ProSiteProfiles Protein kinase domain profile. 120 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00907 710 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 91 250 - -
Cpe07g00907 710 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 251 684 - -
Cpe07g00907 710 CDD STKc_MAPKKK 119 401 - -
Cpe07g00907 710 Gene3D Transferase(Phosphotransferase) domain 1 119 251 - -
Cpe07g00907 710 Gene3D Transferase(Phosphotransferase) domain 1 252 425 - -
Cpe07g00907 710 Pfam Protein kinase domain 251 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00907 710 Pfam Protein kinase domain 121 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00907 710 SUPERFAMILY Protein kinase-like (PK-like) 251 434 IPR011009 -
Cpe07g00907 710 SMART serkin_6 120 401 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00907 710 SUPERFAMILY Protein kinase-like (PK-like) 111 250 IPR011009 -
Cpe07g00907 710 ProSitePatterns Protein kinases ATP-binding region signature. 126 149 IPR017441 GO:0005524
Cpe07g00907 710 MobiDBLite consensus disorder prediction 611 685 - -
Cpe07g00907 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 263 275 IPR008271 GO:0004672|GO:0006468
Cpe07g00907 710 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 1 81 - -
Cpe07g00907 710 MobiDBLite consensus disorder prediction 644 664 - -
Cpe07g00907 710 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 81 - -
Cpe07g00907 710 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 91 250 - -
Cpe07g00907 710 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE NPK1-LIKE ISOFORM X1 251 684 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00907 Cpe11g00936 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00907 Cpe-Chr7:8123321 Cpe12g00214 Cpe-Chr12:1402800 0 dispersed
Cpe19g00901 Cpe-Chr19:6555014 Cpe07g00907 Cpe-Chr7:8123321 2.73E-19 dispersed
Cpe11g00936 Cpe-Chr11:7917148 Cpe07g00907 Cpe-Chr7:8123321 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62516 PF00069 Pkinase 2.10E-45 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00907 K20606 - csv:101209358 1025.0