Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00925 ATGTTGAGATTCCATGTGGGCGGGAAGGTGGTCGAGAGAGTTGACTTGTTGAGGAAGAAACACTGGACATGGCGGTTGGATCTGTGGCCATTCGCCATTCTTTATGCGGCCTGGCTTGCTGTCGTTGTTCCTAGTATTGACTTTGGGGATGCTCTCATTGTTTTGGGTGGACTTGTGGCTCTTCATGTTCTGGTCTTGCTTTTCACTGGTTGGTCGGTTGATTTCAAATGTTTTGTCCAGTACAGCAAGGTTAATGATATTTATCATGCTGATACATGCAAGATAGTTCCAGCAAAATTTTCGGGCTCAAAAGAGATTGTTTCTCTTCATTTTCGTAAGCTTCTGGCTGGTTCTGAATCTGCAATGGATATTGAGGAGATCTACTTTGATTTCAGAAAACAAAGATTTATTTATTCGAAGGAAAAGGAGACTTTCTGCAAGCTTCCTTACCCAACAAAAGAAACTTTTGGTTATTATCTAAAGAATACTGGCTATGGCTCCGAGCCTAAAGTTGTAGCCGCCGTTGATAAATGGGGACGCAATATATTTGAGTATCCACAACCTACGTTCCAGAAGTTAATGAAAGAGCAGTGTATGGAACCATTTTTTGTTTTTCAGGTTTTTTGTGTGGGACTATGGTGTTTGGATGAGTATTGGTATTACAGCCTGTTTACACTTTTTATGCTTTTCATGTTTGAATCAACAATGGCAAAAAGTCGGTTAAAGACCTTAAGTGAGTTAAGACGTGTCAGAGTGGATACTCAGACCTTAATGGTGCATCGGTGTGGAAAGTGGGTGAAGCTACCTGGAACTGAGCTTTTGCCTGGCGATGTTGTCTCCATTGGGCGTAATTCTGGTCAGAGTGGTGAAGATAAATCTGTACCTGCTGATATGCTTATATTGGCTGGAAGTGCTATTGTTAATGAAGCCATTCTTACTGGGGAGTCTACACCACAATGGAAGGTTTCAGTATCTGGGAGAGGAATTGAGGAGAAGTTATCGGCTAAGAGAGACAAAAGTCACATGTTATTTGGTGGAACCAAAATATTGCAGCATACACCAGATAAGACCTTTCCCCTTAGGACCCCTGATGGTGGCTGCCTAGCAGTTGTTTTGAGAACTGGATTTGAAACAAGTCAAGGGAAACTAATGCGGACAATTTTGTTTTCTACAGAGAGGGTTACAGCTAACAGTTGGGAAAGTGGCTTATTTATTTTGTTCTTGGTTGTATTTGCGGTTATAGCTGCTGGTTACGTTCTTGTAAAGGGGTTGGAAGATCCCACGAGAAGCAAGTACAAGCTTTTCCTTAGTTGCTCACTTATAATCACTTCTGTTATTCCTCCTGAACTACCGATGGAACTGTCAATAGCCGTTAATACATCGTTAATTGCTCTGGCACGTTGTGGAATATTTTGTACTGAGCCTTTCAGAATACCATTTGCTGGAAAGGTTGATATTTGTTGTTTTGATAAAACTGGAACGTTGACATCAGATGACATGGAGTTTCAAGGTGTAGTTGGATTGAATGATAAGGAGGATTTGGAAACTGACATGACTAGTGTGCCTTTGCGCACAGTTGAAATTCTGGCTTCTTGCCATGCATTGGTGTTTGTGGACAACAAGTTGGTGGGGGATCCTCTTGAAAAGGCTGCGCTGAAGGGAGTTGACTGGACTTACAAATCTGATGAGAAAGCCATTCCAAGAAAGGGAAGTGGCCACGCTGTTCAGATTGTTCAGAGGCACCACTTTGCTTCACATTTGAAGAGAATGGCAGTTGTTGTGCGCCTTCAAGAGGAATTTTTTGCATTTGTGAAGGGTGCTCCTGAAACAATACAAGAGAGGCTCACTGATATACCTTCATTTTATGTTGAGACGTACAAGAAATATACACGACAAGGTTCCCGTGTTCTTGCTCTTGCTTACAAATCACTTCCAGACATGATGGTTAGTGAAGCTAGAGGCCTGGATAGGGACTTGGTGGAGAGTGACCTTATATTTGCTGGTTTTGCGGTGTTCAATTGTCCAATTAGAGCGGATTCGGCTACAGTCTTATCTGAGCTTAAAGGATCATCCCATGACTTGGTAATGATTACTGGTGACCAAGCTTTAACGGCATGCCACGTAGCTAGCCAAGTTCATATTACCTCAAAGCAGATTTTAATTCTCAATTCAAAGAAGGGAACTGAGGAATATGAATGGCTCTCCCCAGATGAGTTACAGACAGTTCCCTACAGTGAGAAAGAGGTGGGGAATTTATCAGAGACATACGATCTGTGTATTGGTGGTGACTGCATCGGAATGCTGCAAAGCACCTCCACTGTGCTCGATGTTATTCCATACGTTAAGGTTTTTGCAAGAGTTGCTCCAGAGCAGAAAGAACTCATATTGACCACTTTCAAATCAGTTGGAAGAATGACATTGATGTGCGGGGATGGAACAAATGATGTTGGAGCTTTGAAGCAGGCTCATGTAGGAATTGCTCTTCTAAACGCAGTCCCCCCTCCTAAAACTGGCAACTCTCCTTCAGAAGCATCAAAAGACGACTCGGTACGGTCTGCAAAGTCGAAGAAATCTAAGCCTTCATCCGAATCATCAGGAAAAGCACTTACAAGCGGAGAAGGTTCTTCAAAAAGCAAAGTTGGTTCAAAACTGGATTCCGCTGCTGAGCAAGCGAGTAACCGTTCAAGGACGCCTGCAGAGATGCAAAGACAAAAGCTAAAGAAACTGATGGATGAGTTAAATGAAGAGGGTGATGGGCGCTCTGCCCCTATCGTCAAGCTTGGGGATGCATCCATGGCATCGCCGTTCACAGCAAAGCATGCTTCTGTTGCCCCGACCACAGACATTATTCGCCAAGGTCGAAGTACTCTAGTGACAACTCTCCAGATGTTTAAAATACTCGGTCTCAACTGCCTCGCCACGGCCTATGTATTGAGTGTTATGTATTTGGATGGTGTAAAGCTTGGCGACATTCAAGCGACAATCAGTGGAGTATTCACAGCAGCCTTTTTCCTCTTCATCTCACATGCACGCCCCCTTCCAACACTTTCAGCTGAACGGCCCCATCCACATATCTTCTGCTCTTATGTTCTCCTTTCCCTGCTAGGCCAATTTGCAATCCACCTCTTTTTCTTGATTTCTTCAGTTAACGAAGCCGAAAAGCACATGCCCGACGAATGCATCGAGCCAGACTCAGATTTTCATCCCAACTTGGTTAACACTGTTTCGTACATGGTAAGCATGATGCTTCAGGTAGCTACCTTTGCTGTAAACTACATGGGTCATCCTTTCAACCAGAGTGTATCCGAAAACAAACCATTCTTATACGCCCTCTTGGCTGCGGTTGGTTTCTTCACCGTCATTACCTCGGATTTGTTCCGAGACCTGAATGACTGGCTGAAACTCGTTCCATTGCCTGCGGGATTGAGAGACAAGCTTCTGTTATGGGCACTTCTTATGTTCGTGTGCTGTTACTCTTGGGAAAGACTGTTGAGATGGATGTTCCCTGGAAAAATCCCGGCATGGCGTAAGCGACAACGAGTGGTAGCGGCGAATCTGGAGAAGAAGAAACAGGTCTGA 3579 43.89 MLRFHVGGKVVERVDLLRKKHWTWRLDLWPFAILYAAWLAVVVPSIDFGDALIVLGGLVALHVLVLLFTGWSVDFKCFVQYSKVNDIYHADTCKIVPAKFSGSKEIVSLHFRKLLAGSESAMDIEEIYFDFRKQRFIYSKEKETFCKLPYPTKETFGYYLKNTGYGSEPKVVAAVDKWGRNIFEYPQPTFQKLMKEQCMEPFFVFQVFCVGLWCLDEYWYYSLFTLFMLFMFESTMAKSRLKTLSELRRVRVDTQTLMVHRCGKWVKLPGTELLPGDVVSIGRNSGQSGEDKSVPADMLILAGSAIVNEAILTGESTPQWKVSVSGRGIEEKLSAKRDKSHMLFGGTKILQHTPDKTFPLRTPDGGCLAVVLRTGFETSQGKLMRTILFSTERVTANSWESGLFILFLVVFAVIAAGYVLVKGLEDPTRSKYKLFLSCSLIITSVIPPELPMELSIAVNTSLIALARCGIFCTEPFRIPFAGKVDICCFDKTGTLTSDDMEFQGVVGLNDKEDLETDMTSVPLRTVEILASCHALVFVDNKLVGDPLEKAALKGVDWTYKSDEKAIPRKGSGHAVQIVQRHHFASHLKRMAVVVRLQEEFFAFVKGAPETIQERLTDIPSFYVETYKKYTRQGSRVLALAYKSLPDMMVSEARGLDRDLVESDLIFAGFAVFNCPIRADSATVLSELKGSSHDLVMITGDQALTACHVASQVHITSKQILILNSKKGTEEYEWLSPDELQTVPYSEKEVGNLSETYDLCIGGDCIGMLQSTSTVLDVIPYVKVFARVAPEQKELILTTFKSVGRMTLMCGDGTNDVGALKQAHVGIALLNAVPPPKTGNSPSEASKDDSVRSAKSKKSKPSSESSGKALTSGEGSSKSKVGSKLDSAAEQASNRSRTPAEMQRQKLKKLMDELNEEGDGRSAPIVKLGDASMASPFTAKHASVAPTTDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSVMYLDGVKLGDIQATISGVFTAAFFLFISHARPLPTLSAERPHPHIFCSYVLLSLLGQFAIHLFFLISSVNEAEKHMPDECIEPDSDFHPNLVNTVSYMVSMMLQVATFAVNYMGHPFNQSVSENKPFLYALLAAVGFFTVITSDLFRDLNDWLKLVPLPAGLRDKLLLWALLMFVCCYSWERLLRWMFPGKIPAWRKRQRVVAANLEKKKQV 1192
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8272260 8287332 - Cp4.1LG07g09350.1 Cpe07g00925 472732
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00925 1192 ProSitePatterns Hypothetical cof family signature 2. 809 831 - -
Cpe07g00925 1192 PANTHER CATION-TRANSPORTING ATPASE-RELATED 1 1186 - -
Cpe07g00925 1192 PANTHER CATION-TRANSPORTING ATPASE 1 1186 - -
Cpe07g00925 1192 Pfam E1-E2 ATPase 256 467 - -
Cpe07g00925 1192 SUPERFAMILY Calcium ATPase, transmembrane domain M 167 1169 IPR023298 -
Cpe07g00925 1192 MobiDBLite consensus disorder prediction 830 904 - -
Cpe07g00925 1192 SFLD C1.7: P-type atpase like 469 955 - -
Cpe07g00925 1192 MobiDBLite consensus disorder prediction 862 899 - -
Cpe07g00925 1192 SFLD p-type atpase 469 955 IPR044492 -
Cpe07g00925 1192 TIGRFAM P-ATPase-V: P-type ATPase of unknown pump specificity (type V) 42 1149 IPR006544 GO:0006812|GO:0016021|GO:0019829|GO:0140358
Cpe07g00925 1192 Gene3D - 224 388 - -
Cpe07g00925 1192 MobiDBLite consensus disorder prediction 847 861 - -
Cpe07g00925 1192 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 494 678 IPR023299 GO:0000166
Cpe07g00925 1192 Gene3D - 669 834 IPR023214 -
Cpe07g00925 1192 Gene3D - 484 668 IPR023299 GO:0000166
Cpe07g00925 1192 Coils Coil 896 916 - -
Cpe07g00925 1192 ProSitePatterns E1-E2 ATPases phosphorylation site. 490 496 IPR018303 -
Cpe07g00925 1192 PRINTS P-type cation-transporting ATPase superfamily signature 308 322 - -
Cpe07g00925 1192 PRINTS P-type cation-transporting ATPase superfamily signature 488 502 - -
Cpe07g00925 1192 PRINTS P-type cation-transporting ATPase superfamily signature 690 700 - -
Cpe07g00925 1192 PRINTS P-type cation-transporting ATPase superfamily signature 809 828 - -
Cpe07g00925 1192 Pfam haloacid dehalogenase-like hydrolase 485 713 - -
Cpe07g00925 1192 SUPERFAMILY Calcium ATPase, transduction domain A 256 387 IPR008250 -
Cpe07g00925 1192 CDD P-type_ATPase_cation 170 1107 - -
Cpe07g00925 1192 SUPERFAMILY HAD-like 483 834 IPR036412 -
Cpe07g00925 1192 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 403 515 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe07g00925 1192 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 774 828 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00925 Cpe-Chr7:8272260 Cpe06g00200 Cpe-Chr6:1073086 1.05E-18 dispersed
Cpe11g00959 Cpe-Chr11:8104297 Cpe07g00925 Cpe-Chr7:8272260 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00925 K14950 - csv:101215828 2216.81