Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00930 ATGGTTGCTCAAAGGAAGGGAGCATCGCGGGTTTCCGAGGACCCCGAGGAGCTGGCAAGAGTTTCGTTGCAGGCTGTTCTTCTTGCTGATAGCTTTACCACTAAGTTTCATCCCATAACGCTTGAACGCCCGAAGGTATTATTGCCGTTGGTAAATGTCCCGATGATTAACTATACTTTATCTTGGCTCGAATCGGCTGGTGTTGAGGAGGTGTTTGTATTTTGCTGTGCTAATTCGAAGCAAGTAATTGATTATTTGGAGAACTCTGAGTGGGTATCCCTACCAGACTTTGCAGTCACAACCATAGAGTCGCACAACTCTGTTAGTGCTGGAGATGCTTTGCGTTTGATCTATGAAAGAAATGTGATACATGGTGATTTTGTTCTTATCACTGGGGACACAATAAGCAACATGTCACTTAGGCGAGCTCTTCAAGAACACAAGGAAAGAAAGAAGAAAGATAGTAATGCTGTAATGACTATGGTTGTCAAACGTTCAAAGCCTTCTCCTATCACACACCAATCTCGGCTTGGCACTGATGAGCTATTTATGGCAATTGATCCTAATACTAAGCAGCTCGTGTACTATGAGGATAAGGCTGACAATTCAAAAGGAATTATACATCTTGACAAGTCACTGCTAATGGATAATCCTTCCATGTCACTTCGTAACGATATGCAGGATTGTTACATAGACATATGCTCCCCAGAAGTACTCAGTCTGTTTACTGACAATTTTGATTACCAACATCTTCGTCGTCATTTTGTCAAGGGTTTGCTCTTAGACGATATCATGGGTTACAAGATTTACACACATGAAATTTGCTCAAGCTATGCAGCTAGAATTGATAATTATCGAAGCTATGACACCGTTAGTAAGGACATAATACAGAGGTGGACATATCCACTAGTACCAGATGTTAAATTCTTTGGGAATTCTGCTTACAAACTTGAAAGGCAGGGAATGTATAGAGCATCAGAAATATTGCAGGCACGTTCTGCACAGGTTGGTCCGTTTACTGTTATTGGAGATAACAGCAAAATTGGTGGCAACACCAAAATTACAAATTCAATTATTGGGCAAGGTTGTAGTATTGGATCAAATGTTACAATTGAAGGCTCTTATATATGGGACAACGTCACCATTGAAGATGGCTGTAAACTTAGTCATGCTATCGTATGTGATGGAGTTATTATAAAATCAGGAGCAGAACTTGAACCTGGTGTAATTTTGTCTTTCAAGGTTATTGTCGGGGATCAGTTTGTTGTTCCATCATATTCAAAGGTATCTTTGTTTCAGCAGCCGACCAATCAAGATAGCGATGAGGAGCTGGAATATGCAGACAATAGCAGTGGCATTGTAGAATTTGCAGGTACAACGGACAAGTCAAGTAGTGAACAGTCCAAATCGCTGGAAATGCAAGGCTGGCCTGCATCTGAGCTAGGTAATGGAGGTATAGGATATGTTTGGTCAATTTGTGAAGGAAGCGTTGAAGAAGAATGGAGGCACTCAGTTGCACCCATTCCTTCCAATAAACTTGAGAAGGCTCTGCAAGCGGCAGATGATGAGTTGGAGTTAACTCAAGATTCGAATGTTCTACCAACTTCAGGGGAGTTAAAGTCCGACTCAAATTTCTCAGATGGTGATGACAACGAAGACTCTAGAGATGACTCCATCCACTTTGAGAAAGAGGTCGAAGCAACGTTTCTGAGGGCTGTGCATGAAAACATTAAAGTAGACAATGTAATTTTGGAAGTGAATTCATTGCGGTTGTCATATAATAAGGTGGCTGCAGATTGTGCAGGAGCAATATTTTATTCATTGATGAAATTTGCCTACGATTCTCCACATGGTTCATCTAGTGAATTACTGCAAAATACTACCAATATAATTACGAAATGGAAAAAGCTTTTGAAGTACTACCTTGCTGACATGGATGAAGAGATTGAAGTGATATTAAAATTCGAAGAGATATGCTTGGAATCTGCCAAGGAATTTACTCCACATTTTACCAAGATCTTATGTCATCTATATGACCAAGAAATCATTCAAGAAGATGCTATTCTGAGGTGGGACGATGAGAAAAAAGAAGCAGATGATTCGGATAAACTCTTCGTCAAGCAGGCAGAGAAATTCATTGAATGGTTAAGAGTTGCATCAGAAGAGGAAGAAGAAGAGGAAGAAGAGGAAGAATAG 2196 40.35 MVAQRKGASRVSEDPEELARVSLQAVLLADSFTTKFHPITLERPKVLLPLVNVPMINYTLSWLESAGVEEVFVFCCANSKQVIDYLENSEWVSLPDFAVTTIESHNSVSAGDALRLIYERNVIHGDFVLITGDTISNMSLRRALQEHKERKKKDSNAVMTMVVKRSKPSPITHQSRLGTDELFMAIDPNTKQLVYYEDKADNSKGIIHLDKSLLMDNPSMSLRNDMQDCYIDICSPEVLSLFTDNFDYQHLRRHFVKGLLLDDIMGYKIYTHEICSSYAARIDNYRSYDTVSKDIIQRWTYPLVPDVKFFGNSAYKLERQGMYRASEILQARSAQVGPFTVIGDNSKIGGNTKITNSIIGQGCSIGSNVTIEGSYIWDNVTIEDGCKLSHAIVCDGVIIKSGAELEPGVILSFKVIVGDQFVVPSYSKVSLFQQPTNQDSDEELEYADNSSGIVEFAGTTDKSSSEQSKSLEMQGWPASELGNGGIGYVWSICEGSVEEEWRHSVAPIPSNKLEKALQAADDELELTQDSNVLPTSGELKSDSNFSDGDDNEDSRDDSIHFEKEVEATFLRAVHENIKVDNVILEVNSLRLSYNKVAADCAGAIFYSLMKFAYDSPHGSSSELLQNTTNIITKWKKLLKYYLADMDEEIEVILKFEEICLESAKEFTPHFTKILCHLYDQEIIQEDAILRWDDEKKEADDSDKLFVKQAEKFIEWLRVASEEEEEEEEEEE 731
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8332473 8343486 + Cp4.1LG07g09410.1 Cpe07g00930 472737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00930 731 CDD eIF-2B_epsilon_N 23 239 IPR035543 -
Cpe07g00930 731 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT EPSILON 10 727 - -
Cpe07g00930 731 SUPERFAMILY Trimeric LpxA-like enzymes 267 429 IPR011004 -
Cpe07g00930 731 MobiDBLite consensus disorder prediction 527 556 - -
Cpe07g00930 731 Pfam eIF4-gamma/eIF5/eIF2-epsilon 647 726 IPR003307 GO:0005515
Cpe07g00930 731 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 11 303 IPR029044 -
Cpe07g00930 731 CDD W2_eIF2B_epsilon 556 720 IPR044123 GO:0005085|GO:0031369
Cpe07g00930 731 SUPERFAMILY ARM repeat 561 717 IPR016024 -
Cpe07g00930 731 ProSiteProfiles W2 domain profile. 555 726 IPR003307 GO:0005515
Cpe07g00930 731 Gene3D - 548 727 - -
Cpe07g00930 731 MobiDBLite consensus disorder prediction 527 542 - -
Cpe07g00930 731 Gene3D Hexapeptide repeat proteins 319 453 - -
Cpe07g00930 731 Coils Coil 510 530 - -
Cpe07g00930 731 SMART 542_3 635 722 IPR003307 GO:0005515
Cpe07g00930 731 Coils Coil 718 731 - -
Cpe07g00930 731 CDD LbH_eIF2B_epsilon 341 419 - -
Cpe07g00930 731 Pfam Nucleotidyl transferase 25 168 IPR005835 GO:0009058|GO:0016779
Cpe07g00930 731 SUPERFAMILY Nucleotide-diphospho-sugar transferases 22 369 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe02g01338 Cpe-Chr2:11854506 Cpe07g00930 Cpe-Chr7:8332473 3.35E-06 dispersed
Cpe04g00966 Cpe-Chr4:8743094 Cpe07g00930 Cpe-Chr7:8332473 9.49E-18 dispersed
Cpe07g00930 Cpe-Chr7:8332473 Cpe18g00112 Cpe-Chr18:2734390 1.22E-21 dispersed
Cpe11g00963 Cpe-Chr11:8147455 Cpe07g00930 Cpe-Chr7:8332473 1.02E-95 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00930 K03240 - csv:101217025 1294.64