Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00932 ATGGCTAGAGAGATTCTCATTTTGCGGCGCCTAGATCATCCTAATGTTGTAAAGTTAGAGGGTTTGGTTACATCAAGGATGTCATGTAGTTTGTACCTTGTGTTTGAGTATATGGAGCATGATTTAGCTGGACTTGCTGCAAACCCATCCATCAAATTTACAGAGGCTCAGGTCAAGTGTTTCATGAAACAACTGCTATCAGGACTCGAGCATTGTCACAACCACAGGGTGCTTCATCGTGATATTAAGGGTTCGAATCTTCTTATTGATGGTGAAGGGATGCTTAAGATTGCGGACTTTGGACTAGCTACTTTCTTTGATCCAAAACTCAAGCACCCTTTGACTAATCGTGTTGTTACATTATGGTATCGATCTCCGGAGCTTCTACTAGGTGCAACTCATTATGGTGTAGGCATCGACCTTTGGAGTGCAGGTTGTATTTTGGCAGAGTTATTAGCTGGGAGGCCCATAATGCCTGGCCGTACAGAGGTTGAACAACTGCATAAGATATTCAAGCTGTGTGGCTCACCTTCAGATGAATATTTGAAGAGAGCGAAGTTGCCCAATGCAGCCTTATTTAGGCCCAGAGAACCTTATAAGAGATGTATAAGAGAGACCTTTAAAGATTTCCCACCATCATCATTTTCTCTTATAGATACACTTCTTGCAATTGATCCCGCTGAGAGAACGACAGCTAGAGATGCATTGAAAAGCGAGTTTTTCGTTACAGAACCTTATGCATGTGAACCTTCTAGCCTCCCCAAATATCCACCTAGTAAGGAGATGGATGCTAAAAGACGGGACGATGAAGCGCGAAGACAAAGAGCAGCAAGTAAACTGCAGAACGATCATGTGAAGAAGACACGCCCACGTAACCGTGCTGGTAGGGCCATTCCTATTCAAGGAGCCAATGCAGAACTCCAATCAAATATTGACAGACGACGTTTAATTACACACGCAAATGCAAAGAGCAAGAGCGAAAAGTTCCCCCCTCCACATCAGGACGGGGCACTCGGATTCACATTGGGATACTCACGTCATATTGATCCAGCTGCTGTTCCTTCTGATGTTGCATTCAGTTCCACATCATTCGGCTATCCCAACAAGTTCGACGAAACCTGGTCCGGACCATTGGTCGAGTCTTCCGACATCGGTGCTCAAAGGCAGAAGTATCCGGGAGGCGATGCAAAAGAACGACAATCAAGCCAATCTTCAGTTAAAGGGAAAAAGGTAGCATGA 1239 44.71 MAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLAGLAANPSIKFTEAQVKCFMKQLLSGLEHCHNHRVLHRDIKGSNLLIDGEGMLKIADFGLATFFDPKLKHPLTNRVVTLWYRSPELLLGATHYGVGIDLWSAGCILAELLAGRPIMPGRTEVEQLHKIFKLCGSPSDEYLKRAKLPNAALFRPREPYKRCIRETFKDFPPSSFSLIDTLLAIDPAERTTARDALKSEFFVTEPYACEPSSLPKYPPSKEMDAKRRDDEARRQRAASKLQNDHVKKTRPRNRAGRAIPIQGANAELQSNIDRRRLITHANAKSKSEKFPPPHQDGALGFTLGYSRHIDPAAVPSDVAFSSTSFGYPNKFDETWSGPLVESSDIGAQRQKYPGGDAKERQSSQSSVKGKKVA 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8358737 8363981 - Cp4.1LG07g09310.1 Cpe07g00932 472739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00932 412 SUPERFAMILY Protein kinase-like (PK-like) 2 246 IPR011009 -
Cpe07g00932 412 SMART serkin_6 1 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00932 412 MobiDBLite consensus disorder prediction 251 299 - -
Cpe07g00932 412 Gene3D Phosphorylase Kinase; domain 1 1 39 - -
Cpe07g00932 412 Gene3D Transferase(Phosphotransferase) domain 1 40 281 - -
Cpe07g00932 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 77 89 IPR008271 GO:0004672|GO:0006468
Cpe07g00932 412 ProSiteProfiles Protein kinase domain profile. 1 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00932 412 MobiDBLite consensus disorder prediction 321 341 - -
Cpe07g00932 412 MobiDBLite consensus disorder prediction 396 412 - -
Cpe07g00932 412 PANTHER OS01G0367700 PROTEIN 1 389 - -
Cpe07g00932 412 PANTHER CELL DIVISION PROTEIN KINASE 1 389 - -
Cpe07g00932 412 MobiDBLite consensus disorder prediction 259 288 - -
Cpe07g00932 412 MobiDBLite consensus disorder prediction 370 412 - -
Cpe07g00932 412 Pfam Protein kinase domain 2 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00932 Cpe11g00928 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00932 Cpe-Chr7:8358737 Cpe08g00215 Cpe-Chr8:1430904 0 dispersed
Cpe07g00932 Cpe-Chr7:8358737 Cpe03g01388 Cpe-Chr3:11172333 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62519 PF00069 Pkinase 1.90E-56 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00932 K08819 - csv:101217497 760.37