Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00941 CTTGAGCCCGATTGCTCTGAATTCGTTGAAATTGATCCCACTGGTCGATATGGCAGATATAATGAAATTTTAGGAAAAGGGGCTTCAAAAACAGTTTACAGAGCTTTTGATGAGTATGATGGAATTGAAGTAGCTTGGAATCAAGTGAAACTCTATGATTTCTTGCAAAGTCCTGAAGATCTGGAACGACTTTACTGTGAGATTCATCTTTTGAAGACATTGAAACATAGAAATATCATGAAATTCTACACTTCTTGGGTTGATATTGCTAATAGAAACATCAATTTTGTTACTGAAATGTTCACTTCTGGTACTCTTAGACATTACAGAGCTTTTGATGAGTATGATGGAATTGAAGTAGCTTGGAATCAAGTGAAACTCTATGATTTCTTGCAAAGTCCTGAAGATCTGGAACGACTTTACTGTGAGATTCATCTTTTGAAGACATTGAAACATAGAAATATCATGAAATTCTACACTTCTTGGGTTGATATTGCTAATAGAAACATCAATTTTGTTACTGAAATGTTCACTTCTGGTACTCTTAGACAGTAA 555 34.41 LEPDCSEFVEIDPTGRYGRYNEILGKGASKTVYRAFDEYDGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDIANRNINFVTEMFTSGTLRHYRAFDEYDGIEVAWNQVKLYDFLQSPEDLERLYCEIHLLKTLKHRNIMKFYTSWVDIANRNINFVTEMFTSGTLRQ 184
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8423449 8425588 - Cp4.1LG07g09230.1 Cpe07g00941 472748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00941 184 Gene3D Phosphorylase Kinase; domain 1 103 175 - -
Cpe07g00941 184 Gene3D Phosphorylase Kinase; domain 1 3 99 - -
Cpe07g00941 184 Pfam Protein kinase domain 21 111 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00941 184 SUPERFAMILY Protein kinase-like (PK-like) 109 184 IPR011009 -
Cpe07g00941 184 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 109 184 - -
Cpe07g00941 184 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK1 2 110 - -
Cpe07g00941 184 SUPERFAMILY Protein kinase-like (PK-like) 13 109 IPR011009 -
Cpe07g00941 184 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 109 184 - -
Cpe07g00941 184 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 2 110 - -
Cpe07g00941 184 ProSiteProfiles Protein kinase domain profile. 18 184 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe05g00778 Cpe-Chr5:4821817 Cpe07g00941 Cpe-Chr7:8423449 6.97E-28 dispersed
Cpe07g00941 Cpe-Chr7:8423449 Cpe04g00042 Cpe-Chr4:420447 1.27E-44 dispersed
Cpe11g00973 Cpe-Chr11:8243172 Cpe07g00941 Cpe-Chr7:8423449 1.23E-50 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62520 PF00069 Pkinase 1.40E-09 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00941 K08867 - csv:101219552 224.557