Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00954 ATGGCAGGCTTTTTCGGCGTTGATCAGAAAGTTCTTAGTGAGATGGTGAGGGAGAAGGATTGTGAGTGTTTGAATCGATTTGGGGGCGTTGATGGACTGGCCAATCTTCTTAAAACTAATCCACATGACGGAATTTGTGCAACTGAGGATGATCTTAATTACAGAACAAACGCTTTTGGAACAAATACTTACTCGAAGCGCCACGGCAAAAGCTTCTTTAGGTTCGTGATTGAAGCGTTTAACGATACAACAATAATCATTCTATTGATTTGTGCAGTGCTTTCTTTGGGATTTGGTATCAAACAACACGGTTGGGATGATGGATGGTACGACGGTGGCAGCATTGTCATCGCCATATTTCTGGTGGTCGTCGTTTCCGCCGCTAGCAACTTCAAGCAATCGCGACAGTTCGAGAAACTTTCAAACGAGAGAGACGATATAAAAATCGAAGTCACCAGAGCCGGTCGACGCAAATCAGTATCGATATTCGAACTCCTTGTCGGAGACATCGTATATTTGAAGATCGGAGATCAGATTCCCGCGGACGGAGTGTTCCTCGATGGACATTCGCTGAAGATCGACGAATCGAGTATGACTGGAGAGAGCGAACACGCTGAAGTAAATCACGAAATTAATCCGTTTCTGCTATCAGGAACCAAAGTGAACGATGGATTTGGTGTGATGATGGTGACTTCTGTGGGAATGAACACAGCCTGGGGAGAAATGATGAGTTCAATTAGAAGGGAAATTAATGAGGAAACTCCACTGCAAGCTCGTCTGAACAAGATGACCGCCATTATCGGGAAGCTAGGACTGACGGTCGCAGTGGTGGTGCTTCTTGTTCTTCTGGCTCGCTATTTCACTGGTAGCACCGGCGAGTTCAATGGAAGCAAGACGAGGTTCGATGATGTTATGAATGCAGTTCTTGGCATGGTTGCGGCGGCTGTTACAATCGTTGTGGTGGCGATTCCGGAAGGTTTGCCTCTAGCTGTTACTTTAACTTTAGCTTACTCCATGAAAAAGATGATGGCGGATAATGCAATGGTTCGGAAACTCTCTGCTTGTGAGACCATGGGCTCAGCAACAACAATTTGTACCGATAAAACTGGTACCCTTACTTTGAATCAGATGAAAGTTACAGAGTTTTGGATTGGGGAAGATAAAATTATGAACACAGATTATTCCAATTCAAGGATTAGCAGTAAGGTTGTTGAATTACTGCACCAAGCAGTTGGATTGAACACAACTGGTAGTATTCAAACACCAGCTTCTTCATTACCTCTAGAAATCTTCGGGAGTCCGACCGAGAAAGCGATACTTTCGTGGGCGGTATTCGACCTGGATTTGAACTTGGATGAACTGAAGAAACAACATGAGATGATCCTGGTAGAGACTTTCAGTTCAGAGAAGAAGAGAAGCGGAGTTTTGACACGACGACATGGGACGAGGCTTGTTAATACACACTGGAAAGGAGCAGCAGAGATGATATTGGCTATGTGTTCATATTACTATGAGAAACAAGGAACAGCTAGAGCCATTGATGGTGAAATGAGAAGACAATTGACTGAAATAATCACAGCCATGGCAGAAAAAAGCCTGCGATGCATAGCTTTTGCTCACAAGTCGAATGAAGACGACGATATCCGAGACGTTCCTGCAAAACTCGACGAATCGGAGTTGACATTACTGGGAATAGTTGGTTTGAAGGATCCTTGCAGGCCAGGAGCTAGAGAAGCTGTGGAATCATGTAGAGCTGCTGGAGTGAGTATCAAAATGGTGACAGGTGATAATCTACACACAGCAACAGCCATAGCAATTGAATGTGGAATACTAAATCCCGATGACGACGCTATGAACAGCGAAGTAGTTGTCGAGGGCGTAAAATTTAGAAACTACACACCTGAGGAGAGGCTCGAAAAGATTGGGACCATCCGCGTGATGGCTAGATCTTCCCCATTTGACAAGCTTCTAATGGTACAATGCTTGAAGAATCAAGGCCATGTAGTGGCAGTCACCGGGGATGGAACAAATGATGCCCCAGCTCTTCACGAGGCTGACATTGGCCTTTCCATGGGAATTCAAGGAACAGAAGTGGCAAAGGAGAGCTCCGACATCGTCATCTTAGACGATAACTTTACGTCGGTCGTCACCGTCTTGAAATGGGGAAGATGTGTTTACAACAACATTCAAAAGTTCATTCAATTTCAGCTCACTGTGAACATTGCAGCATTAGTCATCAACTTCATCGCCGCTGTCTCGTCTGGTAAAGTCCCGCTAACAGCGGTACAGCTACTATGGGTGAATCTCATCATGGACACCATGGGAGCTTTAGCCTTAGCTACTGAGCTACCCACCAACGATCTCATGACGAAAACGCCAGTCGGTCGATCCAATCCATTAGTAACGAAAATCATGTGGAGGAATCTCATAACTCAGGCTGTGTATCAAGTGACAGTCTTGCTGGTTTTGGAATTTAAAGGAAGTTCCATCTTCAATGTCAATGAGAAGGTTAAGAGCACACTGATCTTCAACACTTTTGTTCTATGCCAAATCTTCAATGAGTTCAATGCAAGGAAGCTGGAGAAGAAGAACATATTTGAAGGGCTACACAAAAGCAAGCTGTTTTTGGCAATAATTGTGATAACCTTAGCTTTTCAAGTGGTAATGGTTGAGGTTTTGGGAAGGTTTGCCAATACATCGAGGTTGAATTGGGGCCAGTGGGGGGCATGTCTTGGCATAGCAGCTTTGTCTTGGCCAATTGGATGGCTATCCAAGTTGATACCAGTTTCAGCCCTGCAGCTTCCATGGGGAAGAAACTCAGCACAATAA 2829 44.68 MAGFFGVDQKVLSEMVREKDCECLNRFGGVDGLANLLKTNPHDGICATEDDLNYRTNAFGTNTYSKRHGKSFFRFVIEAFNDTTIIILLICAVLSLGFGIKQHGWDDGWYDGGSIVIAIFLVVVVSAASNFKQSRQFEKLSNERDDIKIEVTRAGRRKSVSIFELLVGDIVYLKIGDQIPADGVFLDGHSLKIDESSMTGESEHAEVNHEINPFLLSGTKVNDGFGVMMVTSVGMNTAWGEMMSSIRREINEETPLQARLNKMTAIIGKLGLTVAVVVLLVLLARYFTGSTGEFNGSKTRFDDVMNAVLGMVAAAVTIVVVAIPEGLPLAVTLTLAYSMKKMMADNAMVRKLSACETMGSATTICTDKTGTLTLNQMKVTEFWIGEDKIMNTDYSNSRISSKVVELLHQAVGLNTTGSIQTPASSLPLEIFGSPTEKAILSWAVFDLDLNLDELKKQHEMILVETFSSEKKRSGVLTRRHGTRLVNTHWKGAAEMILAMCSYYYEKQGTARAIDGEMRRQLTEIITAMAEKSLRCIAFAHKSNEDDDIRDVPAKLDESELTLLGIVGLKDPCRPGAREAVESCRAAGVSIKMVTGDNLHTATAIAIECGILNPDDDAMNSEVVVEGVKFRNYTPEERLEKIGTIRVMARSSPFDKLLMVQCLKNQGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDIVILDDNFTSVVTVLKWGRCVYNNIQKFIQFQLTVNIAALVINFIAAVSSGKVPLTAVQLLWVNLIMDTMGALALATELPTNDLMTKTPVGRSNPLVTKIMWRNLITQAVYQVTVLLVLEFKGSSIFNVNEKVKSTLIFNTFVLCQIFNEFNARKLEKKNIFEGLHKSKLFLAIIVITLAFQVVMVEVLGRFANTSRLNWGQWGACLGIAALSWPIGWLSKLIPVSALQLPWGRNSAQ 942
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8657439 8660267 - Cp4.1LG07g09550.1 Cpe07g00954 472761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00954 942 PRINTS P-type cation-transporting ATPase superfamily signature 365 379 - -
Cpe07g00954 942 PRINTS P-type cation-transporting ATPase superfamily signature 564 575 - -
Cpe07g00954 942 PRINTS P-type cation-transporting ATPase superfamily signature 586 596 - -
Cpe07g00954 942 PRINTS P-type cation-transporting ATPase superfamily signature 672 691 - -
Cpe07g00954 942 PRINTS P-type cation-transporting ATPase superfamily signature 194 208 - -
Cpe07g00954 942 PRINTS P-type cation-transporting ATPase superfamily signature 696 708 - -
Cpe07g00954 942 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 643 754 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe07g00954 942 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 309 389 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe07g00954 942 SUPERFAMILY Calcium ATPase, transduction domain A 149 245 IPR008250 -
Cpe07g00954 942 ProSitePatterns E1-E2 ATPases phosphorylation site. 367 373 IPR018303 -
Cpe07g00954 942 SUPERFAMILY HAD-like 363 776 IPR036412 -
Cpe07g00954 942 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 17 929 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Cpe07g00954 942 Pfam E1-E2 ATPase 148 343 - -
Cpe07g00954 942 PANTHER CALCIUM-TRANSPORTING ATPASE 2 922 - -
Cpe07g00954 942 PANTHER CATION TRANSPORTING ATPASE 2 922 - -
Cpe07g00954 942 SFLD C1.7: P-type atpase like 347 725 - -
Cpe07g00954 942 SMART Cation_ATPase_N_a_2 26 100 IPR004014 -
Cpe07g00954 942 SUPERFAMILY Calcium ATPase, transmembrane domain M 28 929 IPR023298 -
Cpe07g00954 942 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 371 576 IPR023299 GO:0000166
Cpe07g00954 942 Pfam Cation transporter/ATPase, N-terminus 29 95 IPR004014 -
Cpe07g00954 942 Gene3D - 375 571 IPR023299 GO:0000166
Cpe07g00954 942 SFLD p-type atpase 347 725 IPR044492 -
Cpe07g00954 942 Gene3D - 362 717 IPR023214 -
Cpe07g00954 942 PRINTS H+-transporting ATPase (proton pump) signature 672 688 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe07g00954 942 PRINTS H+-transporting ATPase (proton pump) signature 521 539 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe07g00954 942 PRINTS H+-transporting ATPase (proton pump) signature 704 729 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Cpe07g00954 942 Pfam Cation transporting ATPase, C-terminus 757 927 IPR006068 -
Cpe07g00954 942 Gene3D - 49 247 - -
Cpe07g00954 942 Pfam haloacid dehalogenase-like hydrolase 362 686 - -
Cpe07g00954 942 Gene3D - 78 924 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00954 Cpe-Chr7:8657439 Cpe17g00875 Cpe-Chr17:6800597 0 dispersed
Cpe07g00954 Cpe-Chr7:8657439 Cpe07g00763 Cpe-Chr7:6709252 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00954 K01537 - csv:101218531 1535.78