Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00975 ATGCAGGGTACACCAGTTAACATTATTGTAGGTTCTCATGTCTGGATTGAGGATCCAGAAGTTGCTTGGCTGGATGGATTGGTATCCAAGATTACAGGGCAGGAAGCCGAGATTGAAGCCAGCAATGGAAAGAAAGTTGTTGCAAAATTATCCAAAATATATCCAAAAGATATGGAGGCTCCCGCTGGTGGCGTCGATGATATGACGAAGTTATCTTACCTGCACGAGCCGGGAGTTCTACAAAATTTAAAAAGTCGATATGAACTCAACGAAATCTATACATACACTGGCAATATTCTTATTGCAATTAATCCATTCCAAAGATTGCCTCATCTTTATGATGGTCACATGATGCATCAATACAAAGGAGCACCATTCGGAGAGCTGAGTCCTCATGTTTTTGCTGTAGCTGATGTTGCTTACAGGGCAATGGTTATCGAGGGTAAAAGTAATTCAATTCTGGTCAGTGGTGAAAGTGGAGCAGGGAAAACTGAAACCACAAAGATGCTTATGCGGTACCTTGCATTTTTAGGTGGTCGGGCGGCCACTGAAGGACGAACAGTTGAGCAACAAGTTCTTGAGTCAAATCCAGTGCTTGAAGCTTTTGGAAATGCTAAAACTGTCAGAAATAACAATTCCAGTGATGCTCATGACTATCTTGCCACTAGAAGAGCTATGGATGTTGTTGGAATAAGTGCCAAGGAGCAGGAAGCAATTTTTAGAGTTGTTGCTGCAATTCTTCATCTCGGTAACATTGAATTTACGAAGGGCAAAGACGGCGACTCATCAGTTCCAAAAGACGACAAAGCGAAGTTTCATCTTAAAATGACTTCAGAGCTTCTCATGTGTGATAATGCTGGCCTTGAAGATGCATTATGTAAGCGTGTCATGATCACCCCTGAAGAAGTGATCAAACGTAGCTTGGATCCTCAAAGTGCGGCTATTAGTCGGGATGGTTTGGCCAAAACGATATATTCTCGGCTATTCGACTGGCTGGTTGATAAAATTAATGTCTCAATTGGACAAGATCCTAATTCCAAGTCCTTGATCGGTGTCCTTGATATCTACGGTTTTGAAAGCTTCAAAGCTAACAGTTTTGAGCAGTTCTGTATTAATTTCACAAATGAGAAGTTACAGCAACATTTCAATCAGCACGTTTTCAAAATGGAACAAGAAGAATACACGAAAGAAGAGATCGATTGGAGTTATATTGAGTTCGTTGACAACCAAGATGTGTTAGATCTCATTGAAAAGAAACCTGGTGGAATAGTGGCTCTCCTTGATGAAGCTTGCATGTTTCCGAAATCGACACACGAAACATTTGCTAACAAGCTCTATCAGACTTTCAAAACACATAAGCGGTTCATAAAGCCTAAGCTTTCTCGAACGGATTTCACCATCGCTCATTATGCTGGAGAGGTCTTATATCAATCTGAACAGTTTTTGGACAAAAACAAGGATTATGTTGTTCCTGAATATCAGGATTTGTTGAGTGCCTCCAAATGTTCATTTGTTGCTGGCCTTTTTCCTCCACTAAAAGAAGAATCTGCAAAATCTTCCAAGTTTTCTTCAATCGGGTCTCGCTTTAAGCTACAACTACAACAGTTAATGGAGACATTAAATTCCACAGAGCCTCACTACATCAGATGTGTAAAGCCAAACAACCTCTTAAAACCTGCCATTTTCGAGAATGTTAACATAATGCAACAACTGCGGTGTGGTGGTGTCTTGGAAGCAATCAGAATCAGTTGTGCAGGGTACCCTACTCGCCGTGCGTTCTTTGAGTTCATTAACCGATTCGGAATTTTAGCTGAAGAATCTTTGGAAGGAAACTATGATGAGAAAAGTGTGTGCAAAAAGATACTAGAAAAGCAGGGACTTAAAGGGTTTCAGATTGGTAAGACAAAAGTATTCCTTAGAGCTGGTCAGATGGCTGAATTAGATGCTCGGAGAGCTGAGGTGCTGAGTAATGCAGCAAAGACTATTCAACGGCGCACACGAACCCATATCGCTCGCAAACAGTTTATTGCATTACGAAAGGCGACTATACATGTGCAATCTAGGTGGAGAGGAAAACTGGCTTGCAAACATTTCAAGAATTTGAAGAGGGAGGCAGCTGCTGTGAAAATTCAGAAAAATGCTAGAAGATTTCATGCGAGATCAGCTTATAAGAAACTACAAAGCTCAGCTCGATGGCGTTGCCATAAAGCTGCCTCGTACTATAAGAAACTTCAGAGAGGGTCAATAGTTGCACAATGTAGATGGAGAGGAAAAACTGCAAGAAAGGAACTTAGAAAACTCAAATTGGCTGCAAGGGAGACTGGTGCACTTAAAGAAGCAAAGGATAAGTTGGAAAAGAAAGTGGAAGAACTTACTTGGCGCATACAATTAGAAAAACGTCTAAGGACGGATCTGGAAGAGGCAAAAGCGCAGGAGATAGCGAAATTCCAAAATATCGTGCAAGAACTGCAGGCGAAAGTTGACGAAACAAACGCGTTGCTTGTAAAGGAGCGAGAGGTCGTGAAGAAGGCCACTGAAGAAGCACCTCCTGTTGTACAAGAAACCCAAGTTCTGGTTGAAGATACTAAGAAAATTGATGATTTGACAGAAGAAGTAGAAAGCTTAAAGACCTCGCTGGAGACGGAGAAGAACAGAGCTGATGAATATGAGAAAAAATATGGGGAAGTAGAACAGTCTAGAGAAGAACAACGCAAAAAGTTAGAAGACACAGAGAAAAAAGCTCATCAGCTCCAGGAATCATTGACCAGGCTAGAAGAGAAGCTTTCCAATTTGGAATCAGAGAATCAAGTTTTACGTCAACAAGCCGTGTCTATGGCACCTAATAAAATCCTCTCGGGACGATCTAGATCGATTCTTCAGAGAGGTGCTGAAAGTGGTCATTATGGAGGGGAAGGGAGGACGCCTTTGGATCTTCACAGCCCTTCTATTAACCAAAGGGAATCAGAAGTAGAGGACAAACCTCAAAAATCTCTTAATGAGAAACAGCAAGAGAATCAAGAACTGCTCATTAGATGTATTGCACAGCACCTTGGCTTTGCAGCCAACAGGCCAATAGCTGCTTGTATCATCTACAAATGCCTGCTTCAATGGAGGTCGTTCGAAGTCGAACGCACCAGTGTATTCGATAGGATAATTCAAACCATTGGCCATGCCATTGAGACTCAGGATAACAACGACGTCTTGGCCTATTGGTTGTCCAACGCTTCAACGCTTCTCTTACTGCTTCAGCGCACTTTGAAAGCAAGTGGCGCTGCTGGAATGGCTCCACAACGTCGCCGATCCTCATCAGCCACACTATTCGGGAGGATGACTCAAAGTTTTCGAGGAGCTCCACAAGGAGTTAGTCTATCCTTAATCAATGGTGGAACTAGTGGTGGAGTGGACTCGTTACGACAAGTCGAAGCGAAGTACCCTGCTTTGTTGTTCAAGCAGCAGCTGACAGCCTATGTAGAGAAAATTTATGGAATGATAAGAGACAATTTGAAGAAAGAAATTTCTCCATTGCTAGGATTGTGCATCCAGGCACCAAGAACATCAAGGGCAAGTTTGGTTAAGGGATCTTCTCGTTCGGTTGCCACCACGGAGGCGCAACGTGCCTTAATCGCTCACTGGCAAGGAATCGTGAAGAGCCTCGGGAACTTCTTGAACACCTTAAAAGCAAATCATGTACCTCCATTTTTGGTGCGTAAAGTCTTCATACAAATATTTTCTTTCATCAACGTTCAACTATTTAACAGTCTTCTATTACGACGAGAGTGTTGCTCGTTTAGCAACGGTGAATACGTCAAAGCTGGACTGTCTGAATTAGAGCATTGGTGTTATAAAGCTACTGATGAGTATGCAGGTTCTGCTTGGGACGAGCTAAAGCATATACGACAAGCGATCGGGTTTCTGGTTATTCATCAGAAGCCAAAGAAGACGTTAGACGAAATAAGTCACGATCTATGCCCCGTACTAAGTATACAGCAGCTGTATCGTATCAGTACGATGTACTGGGACGATAAGTATGGTACTCATAGTGTGTCCCCTGATGTAAGATCTTACATATTCTACCATTTTTTTATTCCATTCTCAGTTGATGATTTATCAAAGTCTATGGAACAAATAGACATCGGAGACATCGAACCACCGCCACTGATTCGGGAGAACTCAGGCTTTAGTTTCTTGTTACCTCGAACAGACTAA 4206 42.25 MQGTPVNIIVGSHVWIEDPEVAWLDGLVSKITGQEAEIEASNGKKVVAKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKSRYELNEIYTYTGNILIAINPFQRLPHLYDGHMMHQYKGAPFGELSPHVFAVADVAYRAMVIEGKSNSILVSGESGAGKTETTKMLMRYLAFLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSDAHDYLATRRAMDVVGISAKEQEAIFRVVAAILHLGNIEFTKGKDGDSSVPKDDKAKFHLKMTSELLMCDNAGLEDALCKRVMITPEEVIKRSLDPQSAAISRDGLAKTIYSRLFDWLVDKINVSIGQDPNSKSLIGVLDIYGFESFKANSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDVLDLIEKKPGGIVALLDEACMFPKSTHETFANKLYQTFKTHKRFIKPKLSRTDFTIAHYAGEVLYQSEQFLDKNKDYVVPEYQDLLSASKCSFVAGLFPPLKEESAKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNNLLKPAIFENVNIMQQLRCGGVLEAIRISCAGYPTRRAFFEFINRFGILAEESLEGNYDEKSVCKKILEKQGLKGFQIGKTKVFLRAGQMAELDARRAEVLSNAAKTIQRRTRTHIARKQFIALRKATIHVQSRWRGKLACKHFKNLKREAAAVKIQKNARRFHARSAYKKLQSSARWRCHKAASYYKKLQRGSIVAQCRWRGKTARKELRKLKLAARETGALKEAKDKLEKKVEELTWRIQLEKRLRTDLEEAKAQEIAKFQNIVQELQAKVDETNALLVKEREVVKKATEEAPPVVQETQVLVEDTKKIDDLTEEVESLKTSLETEKNRADEYEKKYGEVEQSREEQRKKLEDTEKKAHQLQESLTRLEEKLSNLESENQVLRQQAVSMAPNKILSGRSRSILQRGAESGHYGGEGRTPLDLHSPSINQRESEVEDKPQKSLNEKQQENQELLIRCIAQHLGFAANRPIAACIIYKCLLQWRSFEVERTSVFDRIIQTIGHAIETQDNNDVLAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPQGVSLSLINGGTSGGVDSLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGSSRSVATTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFIQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLSELEHWCYKATDEYAGSAWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSPDVRSYIFYHFFIPFSVDDLSKSMEQIDIGDIEPPPLIRENSGFSFLLPRTD 1401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8800348 8811108 - Cp4.1LG07g09730.1 Cpe07g00975 472782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00975 1401 SMART MYSc_2a 58 653 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe07g00975 1401 CDD MYSc_Myo11 77 640 IPR036018 -
Cpe07g00975 1401 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 705 IPR027417 -
Cpe07g00975 1401 Gene3D Kinesin motor domain 343 582 IPR036961 -
Cpe07g00975 1401 Gene3D - 653 707 - -
Cpe07g00975 1401 Coils Coil 767 801 - -
Cpe07g00975 1401 Gene3D - 359 543 - -
Cpe07g00975 1401 Coils Coil 806 847 - -
Cpe07g00975 1401 ProSiteProfiles IQ motif profile. 678 707 IPR000048 GO:0005515
Cpe07g00975 1401 PANTHER MYOSIN 729 1398 - -
Cpe07g00975 1401 PANTHER MYOSIN 6 214 - -
Cpe07g00975 1401 Gene3D - 219 230 - -
Cpe07g00975 1401 SMART DIL_2 1237 1344 IPR002710 -
Cpe07g00975 1401 Gene3D Kinesin motor domain 29 218 IPR036961 -
Cpe07g00975 1401 Pfam Myosin head (motor domain) 215 640 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe07g00975 1401 MobiDBLite consensus disorder prediction 984 1000 - -
Cpe07g00975 1401 MobiDBLite consensus disorder prediction 875 919 - -
Cpe07g00975 1401 Gene3D - 587 650 - -
Cpe07g00975 1401 ProSiteProfiles Myosin motor domain profile. 63 652 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe07g00975 1401 Pfam DIL domain 1238 1341 IPR002710 -
Cpe07g00975 1401 PRINTS Myosin heavy chain signature 197 224 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe07g00975 1401 PRINTS Myosin heavy chain signature 93 112 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe07g00975 1401 PRINTS Myosin heavy chain signature 150 175 IPR001609 GO:0003774|GO:0005524|GO:0016459
Cpe07g00975 1401 Gene3D Myosin VI head, motor domain, U50 subdomain 232 521 - -
Cpe07g00975 1401 SMART iq_5 743 765 IPR000048 GO:0005515
Cpe07g00975 1401 SMART iq_5 654 676 IPR000048 GO:0005515
Cpe07g00975 1401 SMART iq_5 677 699 IPR000048 GO:0005515
Cpe07g00975 1401 SMART iq_5 702 724 IPR000048 GO:0005515
Cpe07g00975 1401 Pfam Myosin N-terminal SH3-like domain 10 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cpe07g00975 1401 ProSiteProfiles IQ motif profile. 744 773 IPR000048 GO:0005515
Cpe07g00975 1401 PANTHER MYOSIN-9 729 1398 - -
Cpe07g00975 1401 ProSiteProfiles Dilute domain profile. 1049 1363 IPR002710 -
Cpe07g00975 1401 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 9 58 IPR004009 GO:0003774|GO:0005524|GO:0016459
Cpe07g00975 1401 CDD MyosinXI_CBD 1000 1354 IPR037975 GO:0007015
Cpe07g00975 1401 Pfam IQ calmodulin-binding motif 657 675 IPR000048 GO:0005515
Cpe07g00975 1401 Pfam IQ calmodulin-binding motif 679 699 IPR000048 GO:0005515
Cpe07g00975 1401 Pfam IQ calmodulin-binding motif 705 724 IPR000048 GO:0005515
Cpe07g00975 1401 Coils Coil 858 941 - -
Cpe07g00975 1401 PANTHER MYOSIN 214 729 - -
Cpe07g00975 1401 MobiDBLite consensus disorder prediction 963 1001 - -
Cpe07g00975 1401 PANTHER MYOSIN-9 214 729 - -
Cpe07g00975 1401 PANTHER MYOSIN-9 6 214 - -
Cpe07g00975 1401 ProSiteProfiles IQ motif profile. 655 682 IPR000048 GO:0005515
Cpe07g00975 1401 ProSiteProfiles IQ motif profile. 703 731 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00975 Cpe-Chr7:8800348 Cpe17g00648 Cpe-Chr17:5286872 2.13E-103 dispersed
Cpe11g01007 Cpe-Chr11:8497930 Cpe07g00975 Cpe-Chr7:8800348 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00975 K10357 - csv:101206606 2172.9