Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00977 ATGGCTAACCGGTGGTGGACCTCCGGCCAGATGGGTCTTCCCGGAGTTGATCATACATCCACAACCTCCTCTGCCTTGAGAAAACCAGATCTCGGAATCTCCATGAACAACAACGGCGGTGGCGGTGGTGGCGATGACGATGACGATAGAGACAACGGTGGCAGCGATGAGCCTAAGGAAGGAGCTGTCGACGTTCCCTCTCGCCGCCCTCGTGGCCGTCCGCCCGGGTCCAAGAATAAGCCTAAGCCACCTATCTTTGTTACTAGAGATAGCCCTAATGCCCTAAAAAGCCATGTCATGGAGATTTCTAATGGCGGTGATATTGTTGAGTGTGTCGCTCAATTCTCCCGTCGACGTCAGAAAGGTGTGTCTGTGCTTAGTGGTAGTGGGACGGTAACGAACGTGACCCTTCGACAACCGTCGGCCCCCGGTGCAGTCTTGACACTCCATGGTCGATTCGAGATCCTTTCGTTGACCGGAACTTTCCTCCCTGGACCAGCTCCGCCCGGCTCGGCGGGCCTAACGATCTACTTAGCTGGTGGTCAAGGGCAGGTGGTGGGTGGTAGTGTTGTCGGGCCACTCACCGCTGCCGGGCCGGTGATGGTGATAGCTGCGACGTTTTCCAACGCGACATACGAGCGATTACCGTTGGAAGAGGAGGAAGACGGTGGAGGAGGAGGAGGACAAGGGCTGGCATCAACCGGAGGTGGTGGTGGAGGGGATAGTTCACCACAAGGCATTGGTGGCGGAGTGGGAGATCCATCAGCTATGCCGCCGTTGTACAATTTACCGCCGAACTTGCTGCCGAATGGTGGTGGTGGGCAGATGAATCAGGAGGCTTATTCTTGGGCTCACGGCGGCCGGCCGCCGTTCTAA 876 57.31 MANRWWTSGQMGLPGVDHTSTTSSALRKPDLGISMNNNGGGGGGDDDDDRDNGGSDEPKEGAVDVPSRRPRGRPPGSKNKPKPPIFVTRDSPNALKSHVMEISNGGDIVECVAQFSRRRQKGVSVLSGSGTVTNVTLRQPSAPGAVLTLHGRFEILSLTGTFLPGPAPPGSAGLTIYLAGGQGQVVGGSVVGPLTAAGPVMVIAATFSNATYERLPLEEEEDGGGGGGQGLASTGGGGGGDSSPQGIGGGVGDPSAMPPLYNLPPNLLPNGGGGQMNQEAYSWAHGGRPPF 291
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 8822495 8823459 + Cp4.1LG07g09820.1 Cpe07g00977 472784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00977 291 MobiDBLite consensus disorder prediction 43 67 - -
Cpe07g00977 291 MobiDBLite consensus disorder prediction 13 31 - -
Cpe07g00977 291 Pfam Plants and Prokaryotes Conserved (PCC) domain 97 209 IPR005175 -
Cpe07g00977 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 7 291 IPR014476 GO:0003680
Cpe07g00977 291 MobiDBLite consensus disorder prediction 218 291 - -
Cpe07g00977 291 Gene3D - 96 222 - -
Cpe07g00977 291 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 19 7 291 - -
Cpe07g00977 291 MobiDBLite consensus disorder prediction 1 92 - -
Cpe07g00977 291 PIRSF ESCAROLA 13 291 IPR014476 GO:0003680
Cpe07g00977 291 SUPERFAMILY AF0104/ALDC/Ptd012-like 93 220 - -
Cpe07g00977 291 CDD DUF296 96 179 IPR005175 -
Cpe07g00977 291 ProSiteProfiles PPC domain profile profile. 92 230 IPR005175 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g01502 Cpe-Chr3:11828854 Cpe07g00977 Cpe-Chr7:8822495 1.49E-74 dispersed
Cpe07g00977 Cpe-Chr7:8822495 Cpe08g00320 Cpe-Chr8:2023409 1.64E-97 dispersed
Cpe11g01009 Cpe-Chr11:8519080 Cpe07g00977 Cpe-Chr7:8822495 8.32E-79 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00977 - - cpep:111799159 456.447