Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00985 ATGGCGGGTAATGGCGTTTTTGCAGAGATTCTCCACGATGAAGTTTACAAATACTATTCCGAAGGTGAGTGGAAGAAATCCTCCTCCGGGAAGAGCGTCGCCATTATCAACCCCACTACGAGGAAGACGCAGTACAGAGTTCAAGCTTGTAACCAAGAGGAGGTTAATCAAGTGATGGAAATAGCCAAAACTGCTCAGAAATCGTGGGCTAAGACTCCATTGTGGAAGAGAGCTGAGCTTCTTCATAAGGCAGCTGCAATTTTGAAAGAACATAAAGCACCCATTGCTGAGTGTTTGGTGAAGGAAATTGCAAAACCAGCTAAAGATGCAGTGACTGAGGTTGTGAGGTCTGGGGATCTTGTTTCATATTGTGCTGAAGAAGGTGTTAGGCTCTTGGGAGAAGGGAAGTTCTTGGTTTCTGATAGTTTTCCTGGAAATGAAAGGACCAAATATTGCCTTACTTCCAAGATCCCACTTGGTGTGATCTTAGCCATTCCTCCATTTAACTATCCTGTCAATCTGGCTGTCTCGAAAATTGCACCGGCTTTGATTGCTGGAAATTCGATCGTCCTCAAGCCTCCAACTCAGGGTGCTGTTTCCGCTCTTCATATGGTGCATTGCTTCCATCTTGCTGGTTTTCCTAAAGGCCTTATTAGTTGTGTCACTGGTAAAGGTTCTGAGATTGGTGATTTCCTCACGATGCATCCTGGTGCATCAACTAAGTTCCTTAATACTTCTTTTCTTTTTGATGACAGTGGCCAAAGGTGCACCGCCGTCAAGGTTGTTTTGGTAATGGAGTCCGTAGCAGATGCTTTGGTTGAGAAAGTAAATGCCCGGGTGGCTAAACTAACCGTCGGTGCCCCGGAAGACGACTCAGACATTACTCCAGTCGTGACCGAGTCGTCGGCAAATTTCATCGAAGGGTTGGGATGTGTCTTCACAAAGGACATCAACAAGGCGATATTGATAAGCGACGCAATGGAAACCGGGACAGTTCAAATCAACTCTGCACCCGCTCGAGGACCCGATCATTTCCCATTCCAGGGAATCAAGGACAGTGGAATTGGCTCTCAAGGAGTGACCAACAGCATCAACATGATGACCAAAGTGAAGACCACAGTGATCAACTTGCCAACGCCTTCCTACACCATGGGAACCAAGTCTGTTAGTATGAGAGCCATAGGGTCCAAATTTGGCCAAAGGTGCACCGCCGTCAAGGTTGTTTTGGTAATGGAGTCCGTAGCAGATGCTTTGGTTGAGAAAGTAAATGCCCGGGTGGCTAAACTAACCGTCGGTGCCCCGGAAGACGACTCAGACATTACTCCAGTCGTGACCGAGTCGTCGGCAAATTTCATCGAAGGGTTGGGATGTGTGTTCACAAAAGACATCAACAAGGCGATATTGATAAGCGACGCAATGGAAACCGGGACAGTTCAAATCAACTCTGCGCCCGCTCGAGGACCCGATCATTTCCCATTCCAGGGAATCAAGGACAGTGGAATTGGCTCTCAAGGAGTGACCAACAGCATCAACATGATGACCAAAGTGAAGACCACAGTGATCAACTTGCCAACGCCTTCCTACACCATGGGTTAG 1596 47.43 MAGNGVFAEILHDEVYKYYSEGEWKKSSSGKSVAIINPTTRKTQYRVQACNQEEVNQVMEIAKTAQKSWAKTPLWKRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRLLGEGKFLVSDSFPGNERTKYCLTSKIPLGVILAIPPFNYPVNLAVSKIAPALIAGNSIVLKPPTQGAVSALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGASTKFLNTSFLFDDSGQRCTAVKVVLVMESVADALVEKVNARVAKLTVGAPEDDSDITPVVTESSANFIEGLGCVFTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGVTNSINMMTKVKTTVINLPTPSYTMGTKSVSMRAIGSKFGQRCTAVKVVLVMESVADALVEKVNARVAKLTVGAPEDDSDITPVVTESSANFIEGLGCVFTKDINKAILISDAMETGTVQINSAPARGPDHFPFQGIKDSGIGSQGVTNSINMMTKVKTTVINLPTPSYTMG 531
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
7 8924751 8934184 - Cp4.1LG07g09650.1 Cpe07g00985 472792
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00985 531 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 456 490 IPR016163 GO:0016620
Cpe07g00985 531 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 310 344 IPR016163 GO:0016620
Cpe07g00985 531 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 345 372 IPR016162 GO:0016491
Cpe07g00985 531 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 491 518 IPR016162 GO:0016491
Cpe07g00985 531 SUPERFAMILY ALDH-like 395 522 IPR016161 GO:0016491
Cpe07g00985 531 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 249 309 - -
Cpe07g00985 531 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 456 531 - -
Cpe07g00985 531 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 396 455 - -
Cpe07g00985 531 SUPERFAMILY ALDH-like 12 376 IPR016161 GO:0016491
Cpe07g00985 531 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 13 240 IPR016162 GO:0016491
Cpe07g00985 531 PANTHER ALDEHYDE DEHYDROGENASE 456 531 - -
Cpe07g00985 531 PANTHER ALDEHYDE DEHYDROGENASE 396 455 - -
Cpe07g00985 531 Pfam Aldehyde dehydrogenase family 456 518 IPR015590 GO:0016491
Cpe07g00985 531 Pfam Aldehyde dehydrogenase family 393 453 IPR015590 GO:0016491
Cpe07g00985 531 Pfam Aldehyde dehydrogenase family 310 372 IPR015590 GO:0016491
Cpe07g00985 531 Pfam Aldehyde dehydrogenase family 24 237 IPR015590 GO:0016491
Cpe07g00985 531 Pfam Aldehyde dehydrogenase family 248 307 IPR015590 GO:0016491
Cpe07g00985 531 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 310 385 - -
Cpe07g00985 531 PANTHER NADP-DEPENDENT GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 1 239 - -
Cpe07g00985 531 PANTHER ALDEHYDE DEHYDROGENASE 249 309 - -
Cpe07g00985 531 PANTHER ALDEHYDE DEHYDROGENASE 310 385 - -
Cpe07g00985 531 PANTHER ALDEHYDE DEHYDROGENASE 1 239 - -
Cpe07g00985 531 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 249 260 IPR016160 GO:0016491
Cpe07g00985 531 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 391 454 IPR016163 GO:0016620
Cpe07g00985 531 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 248 308 IPR016163 GO:0016620
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00985 Cpe-Chr7:8924751 Cpe04g00361 Cpe-Chr4:4234773 1.41E-20 dispersed
Cpe07g00985 Cpe-Chr7:8924751 Cpe07g01153 Cpe-Chr7:10092621 2.80E-78 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00985 K00131 - pop:7458414 569.696