Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g00990 ATGACACTTCTCGCCGGAAAACCATTGTTTTGTCTCTGTAATTCGACAATGGCGTCTGCAATTTCTCTTTGCTCTGTTTTTGTTGTTGTTCTTGTTCTGACTCAGTGGGTCAACTCGGAGCCGACTCAGGACAAACAGGCCCTTCTCGATTTCCTCTCTAAAGCTCCTCACGCCAATCGGCATCAATGGAATACCTCCAATTCCGTCTGTAATTGGATCGGCGTTCAGTGTAATTCCAATCAGTCGTTTGTTTATTCCCTCCGTTTGCCCGGCGCTGGCCTCGTCGTGAAATTCCCAACCTCCTCCTTCGCCGGAAATCTAAATCTCTGCGGCGGACCACTCCCCTCCTGCAACCCATCCACCTCTCCAGCACCACCGCCACAAAACCCACCAGCCGTCACTGTCGGGAAACCAAAAAACCGGTTCACAGCTGCCATAATCGGGATCATCATCGGCGGTGTCTTCGCTGCAATTCTCCTCCTCCTCTGTATCCGGCGCCACTCCCACCATCCAGCGAAGTTCCGGAAGCCATCGGCGGCGGCGAGAGCAATCTCCATAGTGGAGGCCGGGACGTCGTCGTCGAAATACGACATTACCGGAGGGTCGGTGGAGGCGGCGGAGAGGAACAAGCTGACGTTCTTCGAAGGGGGAAATTACAATTTCGATTTGGAGGATTTGTTGAGGGCTTCGGCGGAGGTGCTGGGGAAAGGAGACGTGGGAACGTCGTATAAGGCGGTGCTGGAAGAAGGGACGACGGTGGTGGTGAAGCGGCTGAAGGATGTGGCGGCGACGAAGACGGAATTCGAGATTCAAATGGAAGCTTTGGGGAAGATTAAACATCAAAATGTGGTTCCGCTTCGAGCTTTTTACTTCTCCAATGATGAGAAATTGCTGGTTTTTGATTATATCTCCACCGGAAATTTGTCGGCGAGCCTTCACGCTCTAAGCGTGGGCAGGGGACTTGCCCATCTCCACCACCCCTGCAACCTGGTTCACGGCAACATTAAATCCTCCAACGTCCTTCTCCGGCCACACCACGACGCCTGCATCACCGACTTCGGCCTCAACCCATTCTTCACCACCGCCACGCCGCCGAATCGTCTCACTGGTTACCGAGCGCCGGAGGTCCTGGAAACCCGAAAAGTCACCTTCAAATCCGACGTTTACAGCTATGGCGTCCTACTCCTCGAGCTCTTGACCGGTAAAGCCCCCAACCAACAGTCTCTCGGCGAAGACGGCATCGACCTTCCTCGGTGGGTTGAGTCCGTCGTCCAGGAGGAATGGACGGCGGAGGTTTTCGACGTTGAATTGATGCGATTCCACAACATTGAAGAAGAGATGGTTCCGTTGCTTCAAGTCGCAATGTCTTGCGTTTCCACCGTCCCCGATCAACGACCGACAATGTCGAAAGTTGTACGGATGATCGAAGATATGAACATAAGTGAGACCGATGACGGATTGCGCCTGTCTTCCGATGACCTCTCTAAAGGCTCTGATGTTAACATGTCGTCGGCGGAATGGAGAACTCCTTCGTAG 1536 53.52 MTLLAGKPLFCLCNSTMASAISLCSVFVVVLVLTQWVNSEPTQDKQALLDFLSKAPHANRHQWNTSNSVCNWIGVQCNSNQSFVYSLRLPGAGLVVKFPTSSFAGNLNLCGGPLPSCNPSTSPAPPPQNPPAVTVGKPKNRFTAAIIGIIIGGVFAAILLLLCIRRHSHHPAKFRKPSAAARAISIVEAGTSSSKYDITGGSVEAAERNKLTFFEGGNYNFDLEDLLRASAEVLGKGDVGTSYKAVLEEGTTVVVKRLKDVAATKTEFEIQMEALGKIKHQNVVPLRAFYFSNDEKLLVFDYISTGNLSASLHALSVGRGLAHLHHPCNLVHGNIKSSNVLLRPHHDACITDFGLNPFFTTATPPNRLTGYRAPEVLETRKVTFKSDVYSYGVLLLELLTGKAPNQQSLGEDGIDLPRWVESVVQEEWTAEVFDVELMRFHNIEEEMVPLLQVAMSCVSTVPDQRPTMSKVVRMIEDMNISETDDGLRLSSDDLSKGSDVNMSSAEWRTPS 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9019304 9022299 - Cp4.1LG07g09920.1 Cpe07g00990 472797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g00990 511 Pfam Protein kinase domain 231 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00990 511 PANTHER OS05G0480400 PROTEIN 97 496 - -
Cpe07g00990 511 PANTHER OS05G0480400 PROTEIN 23 95 - -
Cpe07g00990 511 Gene3D Phosphorylase Kinase; domain 1 197 302 - -
Cpe07g00990 511 MobiDBLite consensus disorder prediction 494 511 - -
Cpe07g00990 511 MobiDBLite consensus disorder prediction 484 511 - -
Cpe07g00990 511 ProSiteProfiles Protein kinase domain profile. 228 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g00990 511 Pfam Leucine rich repeat N-terminal domain 42 78 IPR013210 -
Cpe07g00990 511 SUPERFAMILY Protein kinase-like (PK-like) 232 479 IPR011009 -
Cpe07g00990 511 PANTHER OS05G0588300 PROTEIN 97 496 - -
Cpe07g00990 511 PANTHER OS05G0588300 PROTEIN 23 95 - -
Cpe07g00990 511 Gene3D Ribonuclease Inhibitor 38 108 IPR032675 -
Cpe07g00990 511 Gene3D Transferase(Phosphotransferase) domain 1 304 495 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g00990 Cpe18g00458 CCT
Cpe04g01150 Cpe07g00990 CCT
Cpe07g00990 Cpe11g01095 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00990 Cpe-Chr7:9019304 Cpe10g01009 Cpe-Chr10:5791475 5.36E-13 dispersed
Cpe11g01095 Cpe-Chr11:9123791 Cpe07g00990 Cpe-Chr7:9019304 1.39E-37 wgd
Cpe18g00458 Cpe-Chr18:5556028 Cpe07g00990 Cpe-Chr7:9019304 1.60E-19 wgd
Cpe04g01150 Cpe-Chr4:9863766 Cpe07g00990 Cpe-Chr7:9019304 6.46E-22 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62523 PF00069 Pkinase 1.70E-32 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g00990 - - csv:101205802 583.178