Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g01010 TCTCCGCCGGTGACCAATTCAACAGCTCCGCCGCCGGTTACCCCCAGTGCGCCGCCGCCATCGACACCTTCGCAGCCGCCACCGGCCGCTACACCTCCACCAACTACCACTCCGCCTGCCGCTGCAACGCCGCCCGCTCCTTCTCAGCCTCCGCCGACATCCGCCCCACCTCCGGCCACTCCCTCTTCACCACCACCGGTTACTCCCCAGCCCACCCCGCCCACTGGCTCTCCCTCGCGGCCGTCTCCCTCTCCTCCGCCGTCTCCGCCATCTACTCCCTCAACTTCTCCACCTCCTCCGTCTTCTACTAGCCCTCCGTCTCCTCCGGGCGGCCACAGTCCGCCTCCTCCGACTTCTCATACGCCGTCCACTCCATCAAGAAGTCCTCCGCCTCCATCGAGGCCGTCGTCATCGCCGCCTTCCTCCTCCTCCTCCTCCTCCTCCTCGCCTAATATTTCAACTGGACTTGTCGTCGGAATCGCAATTGGTGGAGTCGTAATTGTTCTTTTGCTAAGTATAATGTGTCTTTGTTGCACGAAGAAGAGGAGAAGACGACGCGATGAAGAAGGATTCTATCCACACCCTCCGTCAGGACCAAAAGTGGACCCTTATGGTGGCCAGCAGCAATGGCAGCACAATGCTCCTCTGCCACCCGATCCGTTAATCGGGATGGCGCCTAAGCCATCTCCTCCTCCTGCCGTTGCATCCCGACCCCTGCACTCGCCGACCGGGAGTCGGCCCTCGCCTCCACAGCTTTATATGAGTAGCAGTGGAGGTTCAGGCTCTATGTATTCTGGCTCTGAAAATCCACTCCCTCCGCCCCCGCCACCTCCTATGGCCTTTGGTTTCTCAAAAAGTAAAGGGCGACCGACCATGGATTGGCAGACGAGACTTCGAATCGCTTTAGGATCGGCAAAGGGATTAGCTTATCTTCATGAGGATTGTCACCCGAAAATCATTCATCGCGATATTAAAGCCGCTAATATTCTGTTGGATTTCAAGTTTGAAGCAATGGTTGCTGATTTTGGACTTGCAAAGTTCTCTTCTGATGTTAATACCCACGTATCGACTCGAGTGATGGGTACTTTCGGCTATCTTGCACCGGAGTATGCCTCGAGTGGCAAACTTACTGAGAAGTCGGATGTTTTCTCCTTTGGGGTTATGCTTTTGGAGTTGATCACTGGTCGTCGACCGGTCGATACGAGTAATACTTTCATGGAAGATAGTCTCGTAGACTGGGCCAGGCCGTTATTGAACCGAGCTCTAGAAGATGGAAACTTCGATGCTTTGATCGATCCGAGTATTCAGAACAACTACAACCACACTGAGATGGCTCGTATGATCGAATGTGCTGCTGCTTGCGTGCGACATTCTGCAAGGCGTCGACCTCGAATGAGCCAGGTAGTACGAACGCTCGAAGGAGACGCATCACTATCGGATCTCAACGAAGGAATCAAACCCGGGCAGAGCTCAATGTATAGTTCTCATGGAAGCTCAGACTATGACACCCATCAGTACAACGAGGACTTGAGGAAGTTCAGGAAGATGGCACTGGGAAGCTCGGAGTATGGAGCGAGTAGCGAGTACAGCCGACCGACGAGCGAGTACGGGCTGTATCCGTCGGGGACGAGCAGCGAAGGGCAAACGACTAGAGAAATGGAGATGAGAACAGTGAAGAAAGAGAGTGGAGGCTTCAGTGGAAACAATTGA 1710 54.74 SPPVTNSTAPPPVTPSAPPPSTPSQPPPAATPPPTTTPPAAATPPAPSQPPPTSAPPPATPSSPPPVTPQPTPPTGSPSRPSPSPPPSPPSTPSTSPPPPSSTSPPSPPGGHSPPPPTSHTPSTPSRSPPPPSRPSSSPPSSSSSSSSSPNISTGLVVGIAIGGVVIVLLLSIMCLCCTKKRRRRRDEEGFYPHPPSGPKVDPYGGQQQWQHNAPLPPDPLIGMAPKPSPPPAVASRPLHSPTGSRPSPPQLYMSSSGGSGSMYSGSENPLPPPPPPPMAFGFSKSKGRPTMDWQTRLRIALGSAKGLAYLHEDCHPKIIHRDIKAANILLDFKFEAMVADFGLAKFSSDVNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGRRPVDTSNTFMEDSLVDWARPLLNRALEDGNFDALIDPSIQNNYNHTEMARMIECAAACVRHSARRRPRMSQVVRTLEGDASLSDLNEGIKPGQSSMYSSHGSSDYDTHQYNEDLRKFRKMALGSSEYGASSEYSRPTSEYGLYPSGTSSEGQTTREMEMRTVKKESGGFSGNN 569
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9183558 9187771 + Cp4.1LG07g10080.1 Cpe07g01010 472817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g01010 569 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 46 286 - -
Cpe07g01010 569 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 46 286 - -
Cpe07g01010 569 MobiDBLite consensus disorder prediction 219 237 - -
Cpe07g01010 569 MobiDBLite consensus disorder prediction 523 551 - -
Cpe07g01010 569 ProSiteProfiles Protein kinase domain profile. 152 478 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g01010 569 MobiDBLite consensus disorder prediction 184 288 - -
Cpe07g01010 569 Gene3D Transferase(Phosphotransferase) domain 1 283 484 - -
Cpe07g01010 569 MobiDBLite consensus disorder prediction 1 138 - -
Cpe07g01010 569 MobiDBLite consensus disorder prediction 521 569 - -
Cpe07g01010 569 ProSitePatterns Serine/Threonine protein kinases active-site signature. 319 331 IPR008271 GO:0004672|GO:0006468
Cpe07g01010 569 PANTHER SERINE-THREONINE/TYROSINE-PROTEIN KINASE CATALYTIC DOMAIN-CONTAINING PROTEIN-RELATED 286 555 - -
Cpe07g01010 569 MobiDBLite consensus disorder prediction 246 267 - -
Cpe07g01010 569 Pfam Protein kinase domain 299 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g01010 569 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 286 555 - -
Cpe07g01010 569 MobiDBLite consensus disorder prediction 480 503 - -
Cpe07g01010 569 MobiDBLite consensus disorder prediction 1 151 - -
Cpe07g01010 569 MobiDBLite consensus disorder prediction 483 501 - -
Cpe07g01010 569 SUPERFAMILY Protein kinase-like (PK-like) 288 472 IPR011009 -
Cpe07g01010 569 SMART serkin_6 152 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe04g01128 Cpe07g01010 CCT
Cpe07g01010 Cpe18g00431 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g01010 Cpe-Chr7:9183558 Cpe09g00257 Cpe-Chr9:1497415 1.59E-86 dispersed
Cpe18g00431 Cpe-Chr18:5399968 Cpe07g01010 Cpe-Chr7:9183558 6.60E-139 wgd
Cpe04g01128 Cpe-Chr4:9750604 Cpe07g01010 Cpe-Chr7:9183558 2.40E-137 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62524 PF00069 Pkinase 2.60E-25 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g01010 - - bhj:120079307 522.316