Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g01019 ATGGAATCTCCATCGGCAAAGAGCTGGAGCATCCACACTCGGCCGGACATCATCCGGAAGTACCAGATCCTCGAGCGTATCGGATCCGGCGCATATTCCGATGTTCACCGTGCACGGCGGCTCTCCGACGGCGTCATCGTCGCTTTGAAGGAGATCCACGATTATCAATCGGCGTTCCGCGAAATCGAGGCGCTCCAAATCCTTCAAGGTTCGCCTAATATTGTCGTTCTGCATGAGTACTTTTGGCGTGAGGATGAGGATGCTGTGCTTGTTCTCGAGTTTCTGAAGACGGATTTGGCCACCGTTATAGCGGAGGCGAAGAAGCGAGGATCGGACGGTGGAGAATCCGGGTGGAGGCTCGCGGTCGATGAGGTGAAGCGATGGATGATCCAGATTTTGAGTGGTCTTGATGCTTGTCATAGAAATATGATCGTGCATAGGGATTTGAAACCGAGCAATTTGTTGATCGCCGACGATGGCGTGCTCAAACTTGCCGATTTTGGACAGGCAAGAATATTGATGGAGCCAGAATTTGATGAATCCAATGAGATTTCACAACCAAGTGAGATGAATTCTTCTGATCAAGTACCTGCAATTTCTCAGCCACCTGCAATTTTTTCAGGAACAGAAAGTTCGGTTCGAGAAGGAAACAGAACTGAAGAACAAGAACCAATTAGCAGAGAGGAGTATTTTAGAGCTTTAGACGAGCTGAAAGCAAAAAATTCAGAAACTGAGTTTGATAAGGAAACATGTACTTATGATGGAGATACGTCTTGCATAGCAACGTGTACCACGAGTGATCTCGAAGAGGATCCATTTAAAGGTTCATCATATTCTTATGAAATGGAAGGGGGAGTTCCAGCAGATGATGGACAGGGTTCTCTCACTTCTTGCGTCGGAACTCGCTGGTTCAGGGCCCCCGAATTACTCTATGGCTCTACAAACTACGGTTTGGAGATCGACTTATGGTCGTTGGGTTGCATTTTTGCCGAACTTTTTACGTTGGAACCACTTTTTCCAGGAACTGCTGACATTGATCAAATGAGCAGAATTTTCACTACTCTAGGCAACTTGACTGAAGATTCTTGGCCAGGTTGTTCCAAACTTCCAGATTTTCAGATCATATCATTCAACAACATAGACAAGCCTATTGGCCTCGAAGCATGTCTTCCCAACCGATCTCCTGATGAAATTTCCATCGTTAAAAGACTTCTTTGCTACGACCCGTCTAATCGGGCGACAGCCATGGAATTGCTCCAAGACAAGTATTTCACTGATGAGCCACTTCCTGTTCCCCTGTCTGAGCTTCATATTCCTTCAACCAGAACTGGACAGGATCTGGATTCCCCTGCAGGATGGTACAACAACAATGACTCAGACTCCGATATGGACGTACTCGGCCCCTTGAACGTTACCACAAGGGCCACTCGTTACTCCGTACAATATGATTGA 1452 46.83 MESPSAKSWSIHTRPDIIRKYQILERIGSGAYSDVHRARRLSDGVIVALKEIHDYQSAFREIEALQILQGSPNIVVLHEYFWREDEDAVLVLEFLKTDLATVIAEAKKRGSDGGESGWRLAVDEVKRWMIQILSGLDACHRNMIVHRDLKPSNLLIADDGVLKLADFGQARILMEPEFDESNEISQPSEMNSSDQVPAISQPPAIFSGTESSVREGNRTEEQEPISREEYFRALDELKAKNSETEFDKETCTYDGDTSCIATCTTSDLEEDPFKGSSYSYEMEGGVPADDGQGSLTSCVGTRWFRAPELLYGSTNYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQMSRIFTTLGNLTEDSWPGCSKLPDFQIISFNNIDKPIGLEACLPNRSPDEISIVKRLLCYDPSNRATAMELLQDKYFTDEPLPVPLSELHIPSTRTGQDLDSPAGWYNNNDSDSDMDVLGPLNVTTRATRYSVQYD 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9229369 9232135 - Cp4.1LG07g10190.1 Cpe07g01019 472826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g01019 483 PANTHER CYCLIN-DEPENDENT KINASE 10 18 443 - -
Cpe07g01019 483 MobiDBLite consensus disorder prediction 205 224 - -
Cpe07g01019 483 PANTHER CELL DIVISION PROTEIN KINASE 18 443 - -
Cpe07g01019 483 Gene3D Phosphorylase Kinase; domain 1 13 111 - -
Cpe07g01019 483 Gene3D Transferase(Phosphotransferase) domain 1 272 431 - -
Cpe07g01019 483 Gene3D Transferase(Phosphotransferase) domain 1 115 214 - -
Cpe07g01019 483 ProSitePatterns Protein kinases ATP-binding region signature. 27 50 IPR017441 GO:0005524
Cpe07g01019 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Cpe07g01019 483 MobiDBLite consensus disorder prediction 440 459 - -
Cpe07g01019 483 SUPERFAMILY Protein kinase-like (PK-like) 8 440 IPR011009 -
Cpe07g01019 483 ProSiteProfiles Protein kinase domain profile. 21 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g01019 483 SMART serkin_6 21 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g01019 483 Pfam Protein kinase domain 21 177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g01019 483 Pfam Protein kinase domain 292 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g01019 Cpe-Chr7:9229369 Cpe01g01276 Cpe-Chr1:7675157 2.93E-17 dispersed
Cpe11g01119 Cpe-Chr11:9305654 Cpe07g01019 Cpe-Chr7:9229369 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62525 PF00069 Pkinase 1.50E-31 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g01019 - - cmax:111465522 973.385