Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe07g01019 | ATGGAATCTCCATCGGCAAAGAGCTGGAGCATCCACACTCGGCCGGACATCATCCGGAAGTACCAGATCCTCGAGCGTATCGGATCCGGCGCATATTCCGATGTTCACCGTGCACGGCGGCTCTCCGACGGCGTCATCGTCGCTTTGAAGGAGATCCACGATTATCAATCGGCGTTCCGCGAAATCGAGGCGCTCCAAATCCTTCAAGGTTCGCCTAATATTGTCGTTCTGCATGAGTACTTTTGGCGTGAGGATGAGGATGCTGTGCTTGTTCTCGAGTTTCTGAAGACGGATTTGGCCACCGTTATAGCGGAGGCGAAGAAGCGAGGATCGGACGGTGGAGAATCCGGGTGGAGGCTCGCGGTCGATGAGGTGAAGCGATGGATGATCCAGATTTTGAGTGGTCTTGATGCTTGTCATAGAAATATGATCGTGCATAGGGATTTGAAACCGAGCAATTTGTTGATCGCCGACGATGGCGTGCTCAAACTTGCCGATTTTGGACAGGCAAGAATATTGATGGAGCCAGAATTTGATGAATCCAATGAGATTTCACAACCAAGTGAGATGAATTCTTCTGATCAAGTACCTGCAATTTCTCAGCCACCTGCAATTTTTTCAGGAACAGAAAGTTCGGTTCGAGAAGGAAACAGAACTGAAGAACAAGAACCAATTAGCAGAGAGGAGTATTTTAGAGCTTTAGACGAGCTGAAAGCAAAAAATTCAGAAACTGAGTTTGATAAGGAAACATGTACTTATGATGGAGATACGTCTTGCATAGCAACGTGTACCACGAGTGATCTCGAAGAGGATCCATTTAAAGGTTCATCATATTCTTATGAAATGGAAGGGGGAGTTCCAGCAGATGATGGACAGGGTTCTCTCACTTCTTGCGTCGGAACTCGCTGGTTCAGGGCCCCCGAATTACTCTATGGCTCTACAAACTACGGTTTGGAGATCGACTTATGGTCGTTGGGTTGCATTTTTGCCGAACTTTTTACGTTGGAACCACTTTTTCCAGGAACTGCTGACATTGATCAAATGAGCAGAATTTTCACTACTCTAGGCAACTTGACTGAAGATTCTTGGCCAGGTTGTTCCAAACTTCCAGATTTTCAGATCATATCATTCAACAACATAGACAAGCCTATTGGCCTCGAAGCATGTCTTCCCAACCGATCTCCTGATGAAATTTCCATCGTTAAAAGACTTCTTTGCTACGACCCGTCTAATCGGGCGACAGCCATGGAATTGCTCCAAGACAAGTATTTCACTGATGAGCCACTTCCTGTTCCCCTGTCTGAGCTTCATATTCCTTCAACCAGAACTGGACAGGATCTGGATTCCCCTGCAGGATGGTACAACAACAATGACTCAGACTCCGATATGGACGTACTCGGCCCCTTGAACGTTACCACAAGGGCCACTCGTTACTCCGTACAATATGATTGA | 1452 | 46.83 | MESPSAKSWSIHTRPDIIRKYQILERIGSGAYSDVHRARRLSDGVIVALKEIHDYQSAFREIEALQILQGSPNIVVLHEYFWREDEDAVLVLEFLKTDLATVIAEAKKRGSDGGESGWRLAVDEVKRWMIQILSGLDACHRNMIVHRDLKPSNLLIADDGVLKLADFGQARILMEPEFDESNEISQPSEMNSSDQVPAISQPPAIFSGTESSVREGNRTEEQEPISREEYFRALDELKAKNSETEFDKETCTYDGDTSCIATCTTSDLEEDPFKGSSYSYEMEGGVPADDGQGSLTSCVGTRWFRAPELLYGSTNYGLEIDLWSLGCIFAELFTLEPLFPGTADIDQMSRIFTTLGNLTEDSWPGCSKLPDFQIISFNNIDKPIGLEACLPNRSPDEISIVKRLLCYDPSNRATAMELLQDKYFTDEPLPVPLSELHIPSTRTGQDLDSPAGWYNNNDSDSDMDVLGPLNVTTRATRYSVQYD | 483 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 9229369 | 9232135 | - | Cp4.1LG07g10190.1 | Cpe07g01019 | 472826 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe07g01019 | 483 | PANTHER | CYCLIN-DEPENDENT KINASE 10 | 18 | 443 | - | - | |
Cpe07g01019 | 483 | MobiDBLite | consensus disorder prediction | 205 | 224 | - | - | |
Cpe07g01019 | 483 | PANTHER | CELL DIVISION PROTEIN KINASE | 18 | 443 | - | - | |
Cpe07g01019 | 483 | Gene3D | Phosphorylase Kinase; domain 1 | 13 | 111 | - | - | |
Cpe07g01019 | 483 | Gene3D | Transferase(Phosphotransferase) domain 1 | 272 | 431 | - | - | |
Cpe07g01019 | 483 | Gene3D | Transferase(Phosphotransferase) domain 1 | 115 | 214 | - | - | |
Cpe07g01019 | 483 | ProSitePatterns | Protein kinases ATP-binding region signature. | 27 | 50 | IPR017441 | GO:0005524 | |
Cpe07g01019 | 483 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 144 | 156 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe07g01019 | 483 | MobiDBLite | consensus disorder prediction | 440 | 459 | - | - | |
Cpe07g01019 | 483 | SUPERFAMILY | Protein kinase-like (PK-like) | 8 | 440 | IPR011009 | - | |
Cpe07g01019 | 483 | ProSiteProfiles | Protein kinase domain profile. | 21 | 424 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe07g01019 | 483 | SMART | serkin_6 | 21 | 424 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe07g01019 | 483 | Pfam | Protein kinase domain | 21 | 177 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe07g01019 | 483 | Pfam | Protein kinase domain | 292 | 424 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe07g01019 | Cpe-Chr7:9229369 | Cpe01g01276 | Cpe-Chr1:7675157 | 2.93E-17 | dispersed | |
Cpe11g01119 | Cpe-Chr11:9305654 | Cpe07g01019 | Cpe-Chr7:9229369 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62525 | PF00069 | Pkinase | 1.50E-31 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe07g01019 | - | - | cmax:111465522 | 973.385 |