Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe07g01035 | ATGTCGTGGCAAACGTATGTTGATGATCATTTGATGTGCGACATTGATGGCCAAGGCCAGCACCTCACTGCCGCTGCCATTATCGGCCACGATGGTAGCGTCTGGGCTCAGAGCGCCGCATTTCCTCAGTGCAAGCCTCAAGAGATCACTGGTATCATGAAGGATTTTGATGAACCAGGGCATCTTGCACCTACTGGATTACATATTGCAGGCACAAAGTATATGGTAATCCAAGGAGAGCCTGGAGCGGTCATCCGTGGAAAGAAGGGTTCTGGAGGAATTACCATAAAGAAGACTGGTCAAGCTCTAGTTTTTGGCCTCTATGAAGAACCTGTTACTCCAGGACAGTGCAACATGGTCGTTGAGAGGCTGGGCGATTACCTGGTCGATCAGGAAACGAGCGAGCAAGGAAGGGAAAAGAAAAAAAAGAACTCAAGAGATCGAACCAGAAGACAGAGGAAGAAGAAGCGGAGAAAGATGTCGTGGAATGTTTACGTCGATGATCATCTTATGTGCGACATTGAGGGCAATCGCCTCACATCTGCGGCCATTATCGGCCATGACGGCAGCGTTTGGGCCCAAAGCGATACTTTCCCTCAGTTCAAGCCTGAAGAAATTACTGCCATCATGAATGACTTCAATGAACCCGGGGTGCTTGCTCCAACTGGTTTGTACCTTGGTGGTGCCAAATATATGGTAATCCAAGGGGAGCCTGGCGCTGTTATTCGTGGGAAGAAGGGCCCAGGTGGGGTTACTGTTAAGAAGACTGGTTTGGCTTTAATCATTGGCATCTATGATGAACCAATGACTCCCGGTCAGTGCAATATGATTGTTGAAAGGCTTGGAGATTATCTCATCGAACAGGGTCTCTAA | 873 | 48.45 | MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSAAFPQCKPQEITGIMKDFDEPGHLAPTGLHIAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGLYEEPVTPGQCNMVVERLGDYLVDQETSEQGREKKKKNSRDRTRRQRKKKRRKMSWNVYVDDHLMCDIEGNRLTSAAIIGHDGSVWAQSDTFPQFKPEEITAIMNDFNEPGVLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALIIGIYDEPMTPGQCNMIVERLGDYLIEQGL | 290 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 9318854 | 9323782 | + | Cp4.1LG07g10300.1 | Cpe07g01035 | 472842 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe07g01035 | 290 | PRINTS | Profilin signature | 180 | 189 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | PRINTS | Profilin signature | 259 | 272 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | PRINTS | Profilin signature | 272 | 289 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | PRINTS | Profilin signature | 199 | 219 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | PRINTS | Profilin signature | 162 | 171 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | PRINTS | Profilin signature | 223 | 237 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | SUPERFAMILY | Profilin (actin-binding protein) | 2 | 131 | IPR036140 | - | |
Cpe07g01035 | 290 | MobiDBLite | consensus disorder prediction | 132 | 158 | - | - | |
Cpe07g01035 | 290 | Gene3D | Dynein light chain 2a, cytoplasmic | 1 | 132 | - | - | |
Cpe07g01035 | 290 | Gene3D | Dynein light chain 2a, cytoplasmic | 158 | 290 | - | - | |
Cpe07g01035 | 290 | PANTHER | PROFILIN | 1 | 132 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | SUPERFAMILY | Profilin (actin-binding protein) | 161 | 289 | IPR036140 | - | |
Cpe07g01035 | 290 | SMART | prof_2 | 1 | 133 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | SMART | prof_2 | 160 | 290 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | CDD | PROF | 2 | 131 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | PANTHER | PROFILIN | 160 | 290 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | CDD | PROF | 161 | 289 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | PANTHER | PROFILIN | 160 | 290 | - | - | |
Cpe07g01035 | 290 | Pfam | Profilin | 160 | 289 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | Pfam | Profilin | 1 | 131 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | PANTHER | PROFILIN | 1 | 132 | - | - | |
Cpe07g01035 | 290 | ProSitePatterns | Profilin signature. | 1 | 8 | IPR027310 | GO:0003779 | |
Cpe07g01035 | 290 | PRINTS | Plant profilin signature | 86 | 101 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | PRINTS | Plant profilin signature | 1 | 14 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | PRINTS | Plant profilin signature | 106 | 119 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | PRINTS | Plant profilin signature | 54 | 68 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | PRINTS | Plant profilin signature | 29 | 42 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | PRINTS | Plant profilin signature | 119 | 132 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | PRINTS | Plant profilin signature | 73 | 82 | IPR005455 | GO:0003779 | |
Cpe07g01035 | 290 | MobiDBLite | consensus disorder prediction | 143 | 158 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe07g01035 | Cpe11g01144 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe07g01035 | Cpe-Chr7:9318854 | Cpe11g01145 | Cpe-Chr11:9479625 | 1.52E-74 | dispersed | |
Cpe11g01155 | Cpe-Chr11:9529439 | Cpe07g01035 | Cpe-Chr7:9318854 | 1.36E-74 | wgd | |
Cpe03g01090 | Cpe-Chr3:9000799 | Cpe07g01035 | Cpe-Chr7:9318854 | 1.84E-70 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe07g01035 | K05759 | - | twl:120006331 | 252.677 |