Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g01035 ATGTCGTGGCAAACGTATGTTGATGATCATTTGATGTGCGACATTGATGGCCAAGGCCAGCACCTCACTGCCGCTGCCATTATCGGCCACGATGGTAGCGTCTGGGCTCAGAGCGCCGCATTTCCTCAGTGCAAGCCTCAAGAGATCACTGGTATCATGAAGGATTTTGATGAACCAGGGCATCTTGCACCTACTGGATTACATATTGCAGGCACAAAGTATATGGTAATCCAAGGAGAGCCTGGAGCGGTCATCCGTGGAAAGAAGGGTTCTGGAGGAATTACCATAAAGAAGACTGGTCAAGCTCTAGTTTTTGGCCTCTATGAAGAACCTGTTACTCCAGGACAGTGCAACATGGTCGTTGAGAGGCTGGGCGATTACCTGGTCGATCAGGAAACGAGCGAGCAAGGAAGGGAAAAGAAAAAAAAGAACTCAAGAGATCGAACCAGAAGACAGAGGAAGAAGAAGCGGAGAAAGATGTCGTGGAATGTTTACGTCGATGATCATCTTATGTGCGACATTGAGGGCAATCGCCTCACATCTGCGGCCATTATCGGCCATGACGGCAGCGTTTGGGCCCAAAGCGATACTTTCCCTCAGTTCAAGCCTGAAGAAATTACTGCCATCATGAATGACTTCAATGAACCCGGGGTGCTTGCTCCAACTGGTTTGTACCTTGGTGGTGCCAAATATATGGTAATCCAAGGGGAGCCTGGCGCTGTTATTCGTGGGAAGAAGGGCCCAGGTGGGGTTACTGTTAAGAAGACTGGTTTGGCTTTAATCATTGGCATCTATGATGAACCAATGACTCCCGGTCAGTGCAATATGATTGTTGAAAGGCTTGGAGATTATCTCATCGAACAGGGTCTCTAA 873 48.45 MSWQTYVDDHLMCDIDGQGQHLTAAAIIGHDGSVWAQSAAFPQCKPQEITGIMKDFDEPGHLAPTGLHIAGTKYMVIQGEPGAVIRGKKGSGGITIKKTGQALVFGLYEEPVTPGQCNMVVERLGDYLVDQETSEQGREKKKKNSRDRTRRQRKKKRRKMSWNVYVDDHLMCDIEGNRLTSAAIIGHDGSVWAQSDTFPQFKPEEITAIMNDFNEPGVLAPTGLYLGGAKYMVIQGEPGAVIRGKKGPGGVTVKKTGLALIIGIYDEPMTPGQCNMIVERLGDYLIEQGL 290
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9318854 9323782 + Cp4.1LG07g10300.1 Cpe07g01035 472842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g01035 290 PRINTS Profilin signature 180 189 IPR005455 GO:0003779
Cpe07g01035 290 PRINTS Profilin signature 259 272 IPR005455 GO:0003779
Cpe07g01035 290 PRINTS Profilin signature 272 289 IPR005455 GO:0003779
Cpe07g01035 290 PRINTS Profilin signature 199 219 IPR005455 GO:0003779
Cpe07g01035 290 PRINTS Profilin signature 162 171 IPR005455 GO:0003779
Cpe07g01035 290 PRINTS Profilin signature 223 237 IPR005455 GO:0003779
Cpe07g01035 290 SUPERFAMILY Profilin (actin-binding protein) 2 131 IPR036140 -
Cpe07g01035 290 MobiDBLite consensus disorder prediction 132 158 - -
Cpe07g01035 290 Gene3D Dynein light chain 2a, cytoplasmic 1 132 - -
Cpe07g01035 290 Gene3D Dynein light chain 2a, cytoplasmic 158 290 - -
Cpe07g01035 290 PANTHER PROFILIN 1 132 IPR005455 GO:0003779
Cpe07g01035 290 SUPERFAMILY Profilin (actin-binding protein) 161 289 IPR036140 -
Cpe07g01035 290 SMART prof_2 1 133 IPR005455 GO:0003779
Cpe07g01035 290 SMART prof_2 160 290 IPR005455 GO:0003779
Cpe07g01035 290 CDD PROF 2 131 IPR005455 GO:0003779
Cpe07g01035 290 PANTHER PROFILIN 160 290 IPR005455 GO:0003779
Cpe07g01035 290 CDD PROF 161 289 IPR005455 GO:0003779
Cpe07g01035 290 PANTHER PROFILIN 160 290 - -
Cpe07g01035 290 Pfam Profilin 160 289 IPR005455 GO:0003779
Cpe07g01035 290 Pfam Profilin 1 131 IPR005455 GO:0003779
Cpe07g01035 290 PANTHER PROFILIN 1 132 - -
Cpe07g01035 290 ProSitePatterns Profilin signature. 1 8 IPR027310 GO:0003779
Cpe07g01035 290 PRINTS Plant profilin signature 86 101 IPR005455 GO:0003779
Cpe07g01035 290 PRINTS Plant profilin signature 1 14 IPR005455 GO:0003779
Cpe07g01035 290 PRINTS Plant profilin signature 106 119 IPR005455 GO:0003779
Cpe07g01035 290 PRINTS Plant profilin signature 54 68 IPR005455 GO:0003779
Cpe07g01035 290 PRINTS Plant profilin signature 29 42 IPR005455 GO:0003779
Cpe07g01035 290 PRINTS Plant profilin signature 119 132 IPR005455 GO:0003779
Cpe07g01035 290 PRINTS Plant profilin signature 73 82 IPR005455 GO:0003779
Cpe07g01035 290 MobiDBLite consensus disorder prediction 143 158 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g01035 Cpe11g01144 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g01035 Cpe-Chr7:9318854 Cpe11g01145 Cpe-Chr11:9479625 1.52E-74 dispersed
Cpe11g01155 Cpe-Chr11:9529439 Cpe07g01035 Cpe-Chr7:9318854 1.36E-74 wgd
Cpe03g01090 Cpe-Chr3:9000799 Cpe07g01035 Cpe-Chr7:9318854 1.84E-70 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g01035 K05759 - twl:120006331 252.677