Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe07g01036 | ATGAAGACCAAGACGCCATTGAAGCAGCTCAAGCTCTCTGTTCCCGCTCAAGAAACTTCTATCCGTTCTTTTCTAACTGCGAGCGGAACATTTCACGACGGCAATCTGCTTTTGAACCAGAAAGGATTGCGGCTAGTATCTGAAGAGAAAGAAGCGCAGACTTCAGACTGTAAGGAGGTTGATGTCGATTTCTCATTGGATGATCTAGAGACTGTGAAAGTCATCGGGAAAGGAAGTGGAGGTGTAGTACAACTTGTTCAGCACAAATGGGTTGGAAAACTATTTGCCTTAAAGGTCATCCAAATGAACATACAAGAGGATATCCGTAAACAGATAGTGCAGGAACTGAAAATAAACCAAGCAGCACAATGTCCACATATTGTGGTCTGCCATCATTCTTTCTACCACAATGGTGCCATTTCTCTTGTGCTAGAATACATGGATCGTGGTTCTTTAGCTGATGTTGTCAGACAAGTCAAGACAATTCTTGAACCATATCTTGCAGTTGTTTGCAAACAGGTTTTACAAGGTCTTGTTTACTTGCATCATGAGAGACATGTTATACACAGAGACATCAAGCCATCCAATCTACTTGTGAACCATAAAGGGGATGTCAAAATCACTGATTTTGGAGTAAGTGCAATGCTTGCAAGTTCTATGGGTCAGAGAGATACATTTGTTGGGACTTACAATTACATGTCGCCTGAGCGAATTAGCGGGGGAACATATGACTACAGCAGCGATATATGGAGTTTGGGTCTGGTAGTACTTGAATGTGCCATTGGAAGGTTTCCTTATTTGCAGTCTGAAGAGCAGCAAAGTTGGCCAAGCTTTTATGAACTTTTAGAGGCCATTGTAGCAAAGCCACCGCCTTCTGCTCCATCGGATCAATTTTCCCCCGAGTTCTGTTCATTCGTATCTGCTTGCATTAAGAAGGACCCTAAAGAAAGATCATCTTCATTAGATCTTCTGAATCACCCTTTCATCAAGAAATTCGAGGACAAAGACATCGATGTTGGGATTCTCGTTGGCAGCTTGGATCCTCCTAATGTGGGATTTAGTTAA | 1065 | 42.35 | MKTKTPLKQLKLSVPAQETSIRSFLTASGTFHDGNLLLNQKGLRLVSEEKEAQTSDCKEVDVDFSLDDLETVKVIGKGSGGVVQLVQHKWVGKLFALKVIQMNIQEDIRKQIVQELKINQAAQCPHIVVCHHSFYHNGAISLVLEYMDRGSLADVVRQVKTILEPYLAVVCKQVLQGLVYLHHERHVIHRDIKPSNLLVNHKGDVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGGTYDYSSDIWSLGLVVLECAIGRFPYLQSEEQQSWPSFYELLEAIVAKPPPSAPSDQFSPEFCSFVSACIKKDPKERSSSLDLLNHPFIKKFEDKDIDVGILVGSLDPPNVGFS | 354 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 9324987 | 9330348 | + | Cp4.1LG07g10310.1 | Cpe07g01036 | 472843 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe07g01036 | 354 | SUPERFAMILY | Protein kinase-like (PK-like) | 66 | 336 | IPR011009 | - | |
Cpe07g01036 | 354 | PIRSF | ILK | 2 | 326 | - | - | |
Cpe07g01036 | 354 | ProSiteProfiles | Protein kinase domain profile. | 69 | 329 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe07g01036 | 354 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 | 1 | 349 | - | - | |
Cpe07g01036 | 354 | Gene3D | Transferase(Phosphotransferase) domain 1 | 150 | 343 | - | - | |
Cpe07g01036 | 354 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 187 | 199 | IPR008271 | GO:0004672|GO:0006468 | |
Cpe07g01036 | 354 | SMART | serkin_6 | 69 | 329 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe07g01036 | 354 | Pfam | Protein kinase domain | 70 | 329 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cpe07g01036 | 354 | ProSitePatterns | Protein kinases ATP-binding region signature. | 75 | 98 | IPR017441 | GO:0005524 | |
Cpe07g01036 | 354 | CDD | PKc_MAPKK_plant_like | 67 | 333 | - | - | |
Cpe07g01036 | 354 | PANTHER | MITOGEN-ACTIVATED KINASE KINASE KINASE | 1 | 349 | - | - | |
Cpe07g01036 | 354 | Gene3D | Phosphorylase Kinase; domain 1 | 38 | 148 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe03g00581 | Cpe-Chr3:3470754 | Cpe07g01036 | Cpe-Chr7:9324987 | 2.83E-80 | dispersed | |
Cpe07g01036 | Cpe-Chr7:9324987 | Cpe18g00340 | Cpe-Chr18:4849508 | 2.38E-162 | dispersed | |
Cpe11g01143 | Cpe-Chr11:9470532 | Cpe07g01036 | Cpe-Chr7:9324987 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
62527 | PF00069 | Pkinase | 4.10E-65 | CL0016 | Cpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe07g01036 | K04368 | - | csv:101218848 | 670.618 |