Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g01036 ATGAAGACCAAGACGCCATTGAAGCAGCTCAAGCTCTCTGTTCCCGCTCAAGAAACTTCTATCCGTTCTTTTCTAACTGCGAGCGGAACATTTCACGACGGCAATCTGCTTTTGAACCAGAAAGGATTGCGGCTAGTATCTGAAGAGAAAGAAGCGCAGACTTCAGACTGTAAGGAGGTTGATGTCGATTTCTCATTGGATGATCTAGAGACTGTGAAAGTCATCGGGAAAGGAAGTGGAGGTGTAGTACAACTTGTTCAGCACAAATGGGTTGGAAAACTATTTGCCTTAAAGGTCATCCAAATGAACATACAAGAGGATATCCGTAAACAGATAGTGCAGGAACTGAAAATAAACCAAGCAGCACAATGTCCACATATTGTGGTCTGCCATCATTCTTTCTACCACAATGGTGCCATTTCTCTTGTGCTAGAATACATGGATCGTGGTTCTTTAGCTGATGTTGTCAGACAAGTCAAGACAATTCTTGAACCATATCTTGCAGTTGTTTGCAAACAGGTTTTACAAGGTCTTGTTTACTTGCATCATGAGAGACATGTTATACACAGAGACATCAAGCCATCCAATCTACTTGTGAACCATAAAGGGGATGTCAAAATCACTGATTTTGGAGTAAGTGCAATGCTTGCAAGTTCTATGGGTCAGAGAGATACATTTGTTGGGACTTACAATTACATGTCGCCTGAGCGAATTAGCGGGGGAACATATGACTACAGCAGCGATATATGGAGTTTGGGTCTGGTAGTACTTGAATGTGCCATTGGAAGGTTTCCTTATTTGCAGTCTGAAGAGCAGCAAAGTTGGCCAAGCTTTTATGAACTTTTAGAGGCCATTGTAGCAAAGCCACCGCCTTCTGCTCCATCGGATCAATTTTCCCCCGAGTTCTGTTCATTCGTATCTGCTTGCATTAAGAAGGACCCTAAAGAAAGATCATCTTCATTAGATCTTCTGAATCACCCTTTCATCAAGAAATTCGAGGACAAAGACATCGATGTTGGGATTCTCGTTGGCAGCTTGGATCCTCCTAATGTGGGATTTAGTTAA 1065 42.35 MKTKTPLKQLKLSVPAQETSIRSFLTASGTFHDGNLLLNQKGLRLVSEEKEAQTSDCKEVDVDFSLDDLETVKVIGKGSGGVVQLVQHKWVGKLFALKVIQMNIQEDIRKQIVQELKINQAAQCPHIVVCHHSFYHNGAISLVLEYMDRGSLADVVRQVKTILEPYLAVVCKQVLQGLVYLHHERHVIHRDIKPSNLLVNHKGDVKITDFGVSAMLASSMGQRDTFVGTYNYMSPERISGGTYDYSSDIWSLGLVVLECAIGRFPYLQSEEQQSWPSFYELLEAIVAKPPPSAPSDQFSPEFCSFVSACIKKDPKERSSSLDLLNHPFIKKFEDKDIDVGILVGSLDPPNVGFS 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9324987 9330348 + Cp4.1LG07g10310.1 Cpe07g01036 472843
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g01036 354 SUPERFAMILY Protein kinase-like (PK-like) 66 336 IPR011009 -
Cpe07g01036 354 PIRSF ILK 2 326 - -
Cpe07g01036 354 ProSiteProfiles Protein kinase domain profile. 69 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g01036 354 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 6 1 349 - -
Cpe07g01036 354 Gene3D Transferase(Phosphotransferase) domain 1 150 343 - -
Cpe07g01036 354 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Cpe07g01036 354 SMART serkin_6 69 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g01036 354 Pfam Protein kinase domain 70 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g01036 354 ProSitePatterns Protein kinases ATP-binding region signature. 75 98 IPR017441 GO:0005524
Cpe07g01036 354 CDD PKc_MAPKK_plant_like 67 333 - -
Cpe07g01036 354 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 349 - -
Cpe07g01036 354 Gene3D Phosphorylase Kinase; domain 1 38 148 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe03g00581 Cpe-Chr3:3470754 Cpe07g01036 Cpe-Chr7:9324987 2.83E-80 dispersed
Cpe07g01036 Cpe-Chr7:9324987 Cpe18g00340 Cpe-Chr18:4849508 2.38E-162 dispersed
Cpe11g01143 Cpe-Chr11:9470532 Cpe07g01036 Cpe-Chr7:9324987 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62527 PF00069 Pkinase 4.10E-65 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g01036 K04368 - csv:101218848 670.618