Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe07g01040 | ATGAAGATAGTGGAATTGGAAGATGCTGGGACTGATCGGGAAGATGAAATCGGTAGCGGTCAGATTGTGAAGGTGGATGCTAAAAGAGCTTTGGTTGGGGCTGGGGCTCGAATCTTGTTCTACCCTACCCTCTTCTACAACGTGCTTCGAAATAAAATGGAAACCGAATTTAGATGGTGGGATGAAGTCGATCAGTTTCTTCTGCTGGGTGCAGTGCCGTTCCCCAAACACGTGCCGAGATTGAAGAAGCTCGGTGTTGGCGGCGTGATCACTCTGAATGAACCTTATGAAACATTAGTTCCATCTTCCTTGTATTATCGCCACGGAATTGACCACTTACAAATCCCCACCAGAGATTACTGTTTTGCTCCTAAATTTTCTGATATTAAACGAGCTGTGGACTTCATTCACAGAAATGCATCGTCTGGTAAAACGACATACGTCCACTGTAAAGCAGGACGAGGAAGGAGCACGACCATTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCGTCTGCCGCCCTGGAATATGTGCGCTCGAGAAGACCACGCGTGTTGCTCGCCCCATCCCAGTGGGAGGTAAAAGAACTTACTCCTCAAAACTTAAAATTGTTTAGATCATAA | 630 | 46.03 | MKIVELEDAGTDREDEIGSGQIVKVDAKRALVGAGARILFYPTLFYNVLRNKMETEFRWWDEVDQFLLLGAVPFPKHVPRLKKLGVGGVITLNEPYETLVPSSLYYRHGIDHLQIPTRDYCFAPKFSDIKRAVDFIHRNASSGKTTYVHCKAGRGRSTTIVLCYLVKYKHMTPSAALEYVRSRRPRVLLAPSQWEVKELTPQNLKLFRS | 209 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 9344160 | 9352044 | + | Cp4.1LG07g10280.1 | Cpe07g01040 | 472847 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe07g01040 | 209 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 59 | 206 | IPR020422 | GO:0006470|GO:0008138 | |
Cpe07g01040 | 209 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 148 | 158 | IPR016130 | GO:0016311|GO:0016791 | |
Cpe07g01040 | 209 | PANTHER | - | 7 | 195 | - | - | |
Cpe07g01040 | 209 | Pfam | Dual specificity phosphatase, catalytic domain | 81 | 194 | IPR000340 | GO:0008138|GO:0016311 | |
Cpe07g01040 | 209 | PANTHER | DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8 ISOFORM X1-RELATED | 7 | 195 | - | - | |
Cpe07g01040 | 209 | Gene3D | Protein tyrosine phosphatase superfamily | 59 | 205 | IPR029021 | - | |
Cpe07g01040 | 209 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 52 | 195 | IPR029021 | - | |
Cpe07g01040 | 209 | SMART | dsp_5 | 62 | 202 | IPR020422 | GO:0006470|GO:0008138 | |
Cpe07g01040 | 209 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 127 | 195 | IPR000387 | GO:0016311|GO:0016791 | |
Cpe07g01040 | 209 | CDD | PTPMT1 | 59 | 196 | IPR044596 | GO:0004721 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Cpe07g01040 | Cpe11g01148 | CST |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe07g01040 | Cpe-Chr7:9344160 | Cpe14g00928 | Cpe-Chr14:7805755 | 1.18E-98 | dispersed | |
Cpe11g01148 | Cpe-Chr11:9491701 | Cpe07g01040 | Cpe-Chr7:9344160 | 1.32E-128 | wgd | |
Cpe11g01158 | Cpe-Chr11:9541388 | Cpe07g01040 | Cpe-Chr7:9344160 | 1.32E-128 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe07g01040 | - | - | bhj:120080407 | 381.333 |