Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g01040 ATGAAGATAGTGGAATTGGAAGATGCTGGGACTGATCGGGAAGATGAAATCGGTAGCGGTCAGATTGTGAAGGTGGATGCTAAAAGAGCTTTGGTTGGGGCTGGGGCTCGAATCTTGTTCTACCCTACCCTCTTCTACAACGTGCTTCGAAATAAAATGGAAACCGAATTTAGATGGTGGGATGAAGTCGATCAGTTTCTTCTGCTGGGTGCAGTGCCGTTCCCCAAACACGTGCCGAGATTGAAGAAGCTCGGTGTTGGCGGCGTGATCACTCTGAATGAACCTTATGAAACATTAGTTCCATCTTCCTTGTATTATCGCCACGGAATTGACCACTTACAAATCCCCACCAGAGATTACTGTTTTGCTCCTAAATTTTCTGATATTAAACGAGCTGTGGACTTCATTCACAGAAATGCATCGTCTGGTAAAACGACATACGTCCACTGTAAAGCAGGACGAGGAAGGAGCACGACCATTGTGCTTTGCTATTTGGTCAAATATAAGCACATGACCCCGTCTGCCGCCCTGGAATATGTGCGCTCGAGAAGACCACGCGTGTTGCTCGCCCCATCCCAGTGGGAGGTAAAAGAACTTACTCCTCAAAACTTAAAATTGTTTAGATCATAA 630 46.03 MKIVELEDAGTDREDEIGSGQIVKVDAKRALVGAGARILFYPTLFYNVLRNKMETEFRWWDEVDQFLLLGAVPFPKHVPRLKKLGVGGVITLNEPYETLVPSSLYYRHGIDHLQIPTRDYCFAPKFSDIKRAVDFIHRNASSGKTTYVHCKAGRGRSTTIVLCYLVKYKHMTPSAALEYVRSRRPRVLLAPSQWEVKELTPQNLKLFRS 209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9344160 9352044 + Cp4.1LG07g10280.1 Cpe07g01040 472847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g01040 209 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Cpe07g01040 209 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Cpe07g01040 209 PANTHER - 7 195 - -
Cpe07g01040 209 Pfam Dual specificity phosphatase, catalytic domain 81 194 IPR000340 GO:0008138|GO:0016311
Cpe07g01040 209 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8 ISOFORM X1-RELATED 7 195 - -
Cpe07g01040 209 Gene3D Protein tyrosine phosphatase superfamily 59 205 IPR029021 -
Cpe07g01040 209 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 52 195 IPR029021 -
Cpe07g01040 209 SMART dsp_5 62 202 IPR020422 GO:0006470|GO:0008138
Cpe07g01040 209 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Cpe07g01040 209 CDD PTPMT1 59 196 IPR044596 GO:0004721
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g01040 Cpe11g01148 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g01040 Cpe-Chr7:9344160 Cpe14g00928 Cpe-Chr14:7805755 1.18E-98 dispersed
Cpe11g01148 Cpe-Chr11:9491701 Cpe07g01040 Cpe-Chr7:9344160 1.32E-128 wgd
Cpe11g01158 Cpe-Chr11:9541388 Cpe07g01040 Cpe-Chr7:9344160 1.32E-128 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g01040 - - bhj:120080407 381.333