Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g01073 ATGAATAATATACACGATTCTCATAAATCTTTATATATATATATATATTTATTTCACTTCTCTTTATTGGAAGACTTCAGTGCGACCCTCCACCGGAGGAAACTAATAAGCCCGCCAATCATGAAGAAGGACAGCTCCATGAATCCTAACTTGAAGCTCCATCTACCTCCTCCCGAGGAAGTTTCCTTCGCCTTCATAACCCGAGGCGGTACTTTCATAGATGGCGATTTGCTTGTGAATAGAGACGGCGTGCGGATCGTTTCTCAAGCGGAAGACGAAAGTCCTCCACCAATAAAGCCCTCAGACAACCATTTGTCTTTAGCAGATTTAGATTCAATAAAAGTCATTGGGAAAGGAAACGGTGGAGTAGTTCAATTAGTCCGACATAAATGGACGAATCAGTTTTTTGCTCTAAAGGTGATTCAGATGAATGCTGAGGAATCTCGTTGTAGGCTGGTTGCTCAGGAACTAAAAATCAATCAATTGGCACAAAACCCTTACATCGTCGTCTGTTACCAGATCTTCTATGACAATGGTGCCATTTTCATAATTTTGGAATATATGGACGGTGGATCACTCGCAGATCTTCTAAAAAAAGTTGGAACAATCCTAGAGCCGTATCTTGCAGCCATTTGTTACCAGGTCCTCAAGGGGTTAATATACCTTCACCATGAAGAACATGTCATCCACAGAGACCTTAAGCCTTCTAATTTGTTGATAAATCATAGAGGGGAAGTTAAGATTACTGACTTTGGTGTTAGTGCTATACTGGCGAGTACGTCTGATCTGGCACATTCATTCGTTGGCACTTACACTTTCATGTCTCCGGAGAGAATCAGTGGGGGCAAATATGACAACAAAAGTGACATATGGAGTTTGGGATTGGTTTTGCTTGAATGTGCAACGGGTCAATTTCCATATACTCCACCAGATAAGGATAAAGGGTGGGAAGGCTTTTTTGATGTAATGCTAGCTGTAGTCGAACTAGCATCACCATCTGCACCTGAACAATTTTCCCCTGAGTTCTGCTCTTTCATTTCTTCATGCTTACACAAAGATCCGCAGCAGAGAAGCTCTGCACGCGAACTTCTGGTGCATCCTTTCATCAAAAAGTTTGAACACTTGGACGTTGATCTTGCAGCTTACTTCAAAGATGCTGGCTCTCCATTGGCAACCTTCTAA 1182 41.96 MNNIHDSHKSLYIYIYLFHFSLLEDFSATLHRRKLISPPIMKKDSSMNPNLKLHLPPPEEVSFAFITRGGTFIDGDLLVNRDGVRIVSQAEDESPPPIKPSDNHLSLADLDSIKVIGKGNGGVVQLVRHKWTNQFFALKVIQMNAEESRCRLVAQELKINQLAQNPYIVVCYQIFYDNGAIFIILEYMDGGSLADLLKKVGTILEPYLAAICYQVLKGLIYLHHEEHVIHRDLKPSNLLINHRGEVKITDFGVSAILASTSDLAHSFVGTYTFMSPERISGGKYDNKSDIWSLGLVLLECATGQFPYTPPDKDKGWEGFFDVMLAVVELASPSAPEQFSPEFCSFISSCLHKDPQQRSSARELLVHPFIKKFEHLDVDLAAYFKDAGSPLATF 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9515287 9519550 + Cp4.1LG07g10740.1 Cpe07g01073 472880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g01073 393 ProSitePatterns Protein kinases ATP-binding region signature. 116 139 IPR017441 GO:0005524
Cpe07g01073 393 Gene3D Transferase(Phosphotransferase) domain 1 190 388 - -
Cpe07g01073 393 Pfam Protein kinase domain 112 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g01073 393 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 45 392 - -
Cpe07g01073 393 SUPERFAMILY Protein kinase-like (PK-like) 96 375 IPR011009 -
Cpe07g01073 393 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Cpe07g01073 393 CDD PKc_MAPKK_plant_like 108 373 - -
Cpe07g01073 393 Gene3D Phosphorylase Kinase; domain 1 88 189 - -
Cpe07g01073 393 PANTHER MAP KINASE KINASE 45 392 - -
Cpe07g01073 393 Coils Coil 145 165 - -
Cpe07g01073 393 SMART serkin_6 110 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g01073 393 ProSiteProfiles Protein kinase domain profile. 110 369 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe04g01040 Cpe-Chr4:9193846 Cpe07g01073 Cpe-Chr7:9515287 1.11E-09 dispersed
Cpe07g01073 Cpe-Chr7:9515287 Cpe11g01143 Cpe-Chr11:9470532 5.31E-147 dispersed
Cpe18g00340 Cpe-Chr18:4849508 Cpe07g01073 Cpe-Chr7:9515287 0 wgd
Cpe02g01751 Cpe-Chr2:14284672 Cpe07g01073 Cpe-Chr7:9515287 4.28E-59 wgd
Cpe03g01040 Cpe-Chr3:8476797 Cpe07g01073 Cpe-Chr7:9515287 7.78E-49 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62529 PF00069 Pkinase 1.20E-69 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g01073 K20603 - csv:101206374 648.662