Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g01079 ATGGCCGCTGTTCGAAATGTGTTCCTCTTCCTCACCATCTTCCTCGTCGGCGGTCCGCCTCTTTCCTGTTCCCTTTCCGATAACGAGGCCCTCCTGAAGCTCAGGCAATCCTTCACCCATGCCGAATCCCTTAATTCCTGGAACCAGGACTCCCAACCCTGCGCCGCTCGATGGACTGGCATCATCTGCCACAGAGGCGTCATCACCGGTCTCCATCTCACCGGCCTCCGACTCTCCGGCCAGATCGACATCGAAGCTCTCCTAGAGCTTCGCAGCCTTCGAACCGTCAGCCTCGTGAACAACAGCTTCGCCGGGCCGATTCCCGAGTTCAACAGAATCGGCGTTCTCAAATCGCTCCTTCTCACAGGGAATGATTTCTCCGGGGTTATTCCTACCGATTTCTTCTCATCTCTCACCTCTCTCAAGAAGGTTTGGCTGTCTTCCAACAATTTCTCCGGCGACATTCCGCACTCTCTGGCGAAACTCTCGTATCTAATCGAACTCCATCTCGAAAACAACCAATTCTCCGGCAAAATCCCTCACCTACACCAGGCCGCCTTAACCTCTCTAGATCTCTCCAATAACAAGCTGGAGGGAGAAATTCCAGAGAATCTAGCGAAGTTCGACGCGAACGCATTTGCCGGAAACGAAGGTCTGTGCGGGAAGCCGCTCCCGAAATCATGCGACGGCAATAACGCGCAGATTTCGGAGGAAAACGCGTCTCCTCCGGGGGAATCACAAGGCAGCGTCTCGAAATTAGTAGTGGCGTCGTTGATAGCGGTGGCTGTATTTCTGGTGGTGGTTATGTTTCTGAGCGCGTCGAAGCGGAGAGAAGAGAAGTTCAGCAAGCTAGGGCGGGAGCAGATGAATGAGATGGTGGAGGTGCACGTGCCGAGTTCCGGGCATAGGGAGCAGCTGAGTAGAAAAGGTGGGGATTCCAGGAGAGGGTCGCAACAGGGGAAGGGAGGGATGAGTGATCTTGTGGTAGTGAATGAAGAAAAGGGTACGTTTGGGATGGCGGATTTGATGAAGGCGGCGGCGGAGGTGCTGGGGAATGGTGGGTTGGGGTCGGCTTACAAGGCCGTCATGGCAAATGGGCTGTCGGTGGTGGTCAAAAGAATCAGAGAAATGAACAAATTAGGGAAGGATGGGTTCGATGCAGAGATGAGGCGCATGGGACGGCTGCAGCATCACAATATTCTCACGCCTTTGGCGTACCATTACAGGCGGGAGGAGAAGCTGCTGGTGTCCGAGTACATTCCAAAAGGCAGCCTCTTGTATGTGTTGCATGGGGACCGTGGAGCCTGCCATGCGGAGCTGAACTGGGGCACCCGGTTAAAGATCGTGAAGGGGATCGCCAGAGGCCTAGGGTTTCTCCATTCCGAGTTCGCGACCTATGATCTGCCGCATGGGAATCTGAAATCAAGCAACATTCTTCTAAGCGACACCTACGAGCCACTTCTCAGCGACTACGCGTTTCATCCGCTAATCAATCCAAACAACGCGACGGAGGCAATGTTTGGGTACAAATCCCCGGAGTACGCGCAACGGCAGGAAGTTTCCCCAAAATCTGATGTTTATTGCCTTGGAATTATCATTCTAGAAATTCTGACCGGCAAATTTCCTTCTCAATATCTTAGCAATGGCAAGGGAGGGACCGATGTGGTGCAGTGGGTCTCCTCCGCAGTAGCCGAGAAGAGGGAGGCGGAACTCATAGACCCTGAGATAGCAAACGACGCGAATGCAGTGAGCCGGATGGTCGAGCTCCTTAGAATCGGCGCCGATTGCACCCAATCCAATCCTCAGCAACGGCCAGAAATGAAGGAAGCGATTAGGAGAATAGAAGAAATATGA 1854 53.56 MAAVRNVFLFLTIFLVGGPPLSCSLSDNEALLKLRQSFTHAESLNSWNQDSQPCAARWTGIICHRGVITGLHLTGLRLSGQIDIEALLELRSLRTVSLVNNSFAGPIPEFNRIGVLKSLLLTGNDFSGVIPTDFFSSLTSLKKVWLSSNNFSGDIPHSLAKLSYLIELHLENNQFSGKIPHLHQAALTSLDLSNNKLEGEIPENLAKFDANAFAGNEGLCGKPLPKSCDGNNAQISEENASPPGESQGSVSKLVVASLIAVAVFLVVVMFLSASKRREEKFSKLGREQMNEMVEVHVPSSGHREQLSRKGGDSRRGSQQGKGGMSDLVVVNEEKGTFGMADLMKAAAEVLGNGGLGSAYKAVMANGLSVVVKRIREMNKLGKDGFDAEMRRMGRLQHHNILTPLAYHYRREEKLLVSEYIPKGSLLYVLHGDRGACHAELNWGTRLKIVKGIARGLGFLHSEFATYDLPHGNLKSSNILLSDTYEPLLSDYAFHPLINPNNATEAMFGYKSPEYAQRQEVSPKSDVYCLGIIILEILTGKFPSQYLSNGKGGTDVVQWVSSAVAEKREAELIDPEIANDANAVSRMVELLRIGADCTQSNPQQRPEMKEAIRRIEEI 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9550744 9552975 - Cp4.1LG07g10760.1 Cpe07g01079 472886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g01079 617 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Cpe07g01079 617 PANTHER LEUCINE-RICH REPEAT PROTEIN KINASE FAMILY PROTEIN 4 617 - -
Cpe07g01079 617 Pfam Leucine Rich Repeat 187 207 IPR001611 GO:0005515
Cpe07g01079 617 SUPERFAMILY L domain-like 22 207 - -
Cpe07g01079 617 Gene3D Phosphorylase Kinase; domain 1 313 419 - -
Cpe07g01079 617 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 4 617 - -
Cpe07g01079 617 MobiDBLite consensus disorder prediction 294 325 - -
Cpe07g01079 617 Gene3D Transferase(Phosphotransferase) domain 1 420 617 - -
Cpe07g01079 617 SUPERFAMILY Protein kinase-like (PK-like) 348 613 IPR011009 -
Cpe07g01079 617 Pfam Protein kinase domain 348 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g01079 617 Gene3D Ribonuclease Inhibitor 135 183 IPR032675 -
Cpe07g01079 617 Gene3D Ribonuclease Inhibitor 26 134 IPR032675 -
Cpe07g01079 617 ProSiteProfiles Protein kinase domain profile. 344 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g01079 617 CDD STKc_IRAK 350 617 - -
Cpe07g01079 617 Gene3D Ribonuclease Inhibitor 186 226 IPR032675 -
Cpe07g01079 617 MobiDBLite consensus disorder prediction 297 315 - -
Cpe07g01079 617 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g01079 Cpe11g01200 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g00348 Cpe-Chr1:1999051 Cpe07g01079 Cpe-Chr7:9550744 6.98E-109 dispersed
Cpe07g01079 Cpe-Chr7:9550744 Cpe18g00665 Cpe-Chr18:6710715 7.41E-150 dispersed
Cpe11g01200 Cpe-Chr11:9792792 Cpe07g01079 Cpe-Chr7:9550744 0 wgd
Cpe11g01095 Cpe-Chr11:9123791 Cpe07g01079 Cpe-Chr7:9550744 3.85E-112 wgd
Cpe18g00458 Cpe-Chr18:5556028 Cpe07g01079 Cpe-Chr7:9550744 5.01E-110 wgd
Cpe02g01768 Cpe-Chr2:14373468 Cpe07g01079 Cpe-Chr7:9550744 1.50E-153 wgd
Cpe04g01150 Cpe-Chr4:9863766 Cpe07g01079 Cpe-Chr7:9550744 6.75E-121 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62530 PF00069 Pkinase 9.60E-29 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g01079 - - cmo:103498999 992.26