Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g01081 ATGAAAGCTCCCCCAAATGGGTTTGTCCCCAATTCTGGAGAAGGAACAGGTGAAAGGAAGAATATTAACTCTGAGTTATGGCATGCTTGTGCTGGACCTCTTGTTTCGTTACCGCCAGTTGGAAGTCTTGTGGTTTACTTCCCTCAAGGCCACAGTGAACAAGTTGCAGCATCCATGAATAAGGAGACTGATTTCATTCCAAACTACCCTAACCTTCCTTCAAAGTTGGTGTGCATGCTCCATAATGTCATATTACATGCTGATCCTGAAACTGATGAAGTGTATGCACAAATGACCCTTCAACCAGTGAATAAATATGAAAAAGAAGCTTTATTGGCATCTGATATTGGCCTCAAGCAAAACAGGCAGCCTGCTGAGTTCTTCTGCAAAACTCTAACAGCTAGTGACACTAGCACTCACGGTGGATTTTCTGTGCCTCGTCGTGCAGCTGAGAAGATTTTTCCCCCATTAGACTACTCGATGCAACCCCCTGCTCAGGAACTAGTAGCTAGAGATTTGCATGATAATTCATGGACATTCAGACATATTTACCGTGGTATGGGACCTTTCGTATTTTCACCTTTACTGTCTCTAGATGAAAAGTCACAGCTTCTTTTAGGCATAAGGCACGCTAACAGGCAGCAGCCCGCTCTGTCTTCGTCGGTCATATCAAGTGATAGCATGCACATAGGGATTCTTGCTTCTGCTGCTCATGCTGCTGCAAATAACAGTCCTTTTACTATATTTTACAACCCTAGGGCCAGTCCTTCTGAATTTGTCATTCCTTTGGCCAAGTATACGAAAGCAATGTACACACAAGTTTCGCTTGGCATGCGATTTAGGATGATGTTTGAGACTGAGGAGTCGGGAGTACGCAGATATATGGGTACAATTACTGGTATCAGTGACATGGATTCCGTACGATGGAAAAATTCACAGTGGCGCAATCTTCAGGTTGGATGGGATGAATCGGCAGCTGGTGAACGACCGAACCGAGTTTCTATATGGGAAGTTGAGCCGGTTGTGACCCCGTTCTACATATGTCCACCTCCATTTTTCAGACCCAAATTCCCTAAACAACCAGGGATGCCAGATGATGAATCTGATATTGAAAATGCTTTCAAGAGAGCCATGCCGTGGTTCGGTGACGACTTTGGCATGAAAGATACACCAAGCTCGATCTTCCCGGGTTTAAGTTTAGTGCAGTGGATGAGCATGCAACATAATAATCAGTTCCCAGCAGCTCAATCTGGAATTTTGCCGTCCATGCTACAGCAACAGCAATTGCTTGCGGGAAATGTACAATCACATCAAACTAGCCAACCATCGAATAAAAACTCGATTGAGACGACATCTTTATTGCAGGAAACACAGTTTCAGCCACAAATAGATCAGCAGCCTAGCCTTGTTTCGAAACACCATCAGCAGACACAATTTCAACAGGCCCCACTACAATTATTGCAACAAAGTCTGTCTCAAAGAACACAACAACTCCCACAAGTTCAGCAATTTTCACAGCCAATAATCCCATCAGAGCAACAACTTCAATGGCAGCTGCTACAGAAGCTGCAACAACAACAACAGCAACAGCAACAGCAACAGCAGCAGCAGCAACCGTTGGTCTCCCCAGCTAGCCCGCTATTTCCACCTCAAATGATACAGCCGCATCCTGTGCATCAGCAAAACCAGCAGTTACCACCCTTGCCTTTGTCCAATCAGCCACAGTTCAACGCTAGTGGAGGCAGCTTCCAAACAGAAAAACATAACAGCAATGGCTTCTCAAGTTTAGGTCTGATGCAGTCCCAGCAGGTTCCTATAACCCAATCCCATAACCAATTCAAACCAACCACGGCAATCAGGGGATATTCTGGACTGACTGATGGTGATGCTCCGTCTTGTTCAACCTCGCCTTCCACTAATAATTGCCAAGTTTCAGTATCAAACCTGCTCAATAAGAATCAACAAGGAGCAGCCACACTGGGGGGAGATTTGGTAGTTGAGCCTGCAACTAACCTGCCTCAGGAGCTGCCAAGCAAACCTGATTTGCGGAACAAACCCGAGTTTCCTAACTCAAAAGGATTGGACCAACTGAAATATAAAGGCACCGTTCCCGATCAGTCATTTGGGGTTCCAAACTTGCCCTTCAAGCCTGGCTGCTCGAATGATGTCAACGTCAATGAAGCTGGAGCCTTAAGTAGTGGATTGTGGGCAAATCACGGTCAACGAATGCGGACATACACAAAGATTGAAACTAAAGCTGCTAAAATTATGAAGGTTCAAAAGCGTGGATCAGTGGGTAGATGCATCGATGTCACTCGTTACAAAGGATATGACGAGCTTAGGCATGATCTTGCCCGAATGTTTGGTATTGAAGGGCAGTTAGAAGATCCTCAACGAACTGATTGGAAACTTGTTTATGTGGATCATGAAAATGATATACTTCTAGTTGGCGATGATCCTTGGGAGGAGTTTGTGAGCTGTGTTCAGAGCATAAAGATCCTATCATCATCTGAAGTACAGCAGATGAGTTTAAATGGAAATTTGGGTCACATTCAGGCTCCCAATCAAGCTTGCAGCGGGACGGATAGTGGAAACGCATGGAGAGGGCAGTATGATGACAACTCGGCTGCCTCGTTCAATTGA 2643 45.18 MKAPPNGFVPNSGEGTGERKNINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLVCMLHNVILHADPETDEVYAQMTLQPVNKYEKEALLASDIGLKQNRQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTFRHIYRGMGPFVFSPLLSLDEKSQLLLGIRHANRQQPALSSSVISSDSMHIGILASAAHAAANNSPFTIFYNPRASPSEFVIPLAKYTKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVVTPFYICPPPFFRPKFPKQPGMPDDESDIENAFKRAMPWFGDDFGMKDTPSSIFPGLSLVQWMSMQHNNQFPAAQSGILPSMLQQQQLLAGNVQSHQTSQPSNKNSIETTSLLQETQFQPQIDQQPSLVSKHHQQTQFQQAPLQLLQQSLSQRTQQLPQVQQFSQPIIPSEQQLQWQLLQKLQQQQQQQQQQQQQQQPLVSPASPLFPPQMIQPHPVHQQNQQLPPLPLSNQPQFNASGGSFQTEKHNSNGFSSLGLMQSQQVPITQSHNQFKPTTAIRGYSGLTDGDAPSCSTSPSTNNCQVSVSNLLNKNQQGAATLGGDLVVEPATNLPQELPSKPDLRNKPEFPNSKGLDQLKYKGTVPDQSFGVPNLPFKPGCSNDVNVNEAGALSSGLWANHGQRMRTYTKIETKAAKIMKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSSEVQQMSLNGNLGHIQAPNQACSGTDSGNAWRGQYDDNSAASFN 880
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9561062 9569540 - Cp4.1LG07g10790.1 Cpe07g01081 472888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g01081 880 MobiDBLite consensus disorder prediction 530 595 - -
Cpe07g01081 880 MobiDBLite consensus disorder prediction 671 697 - -
Cpe07g01081 880 SMART B3_2 128 212 IPR003340 GO:0003677
Cpe07g01081 880 SUPERFAMILY CAD & PB1 domains 751 832 - -
Cpe07g01081 880 Gene3D - 273 344 - -
Cpe07g01081 880 CDD B3_DNA 127 193 IPR003340 GO:0003677
Cpe07g01081 880 MobiDBLite consensus disorder prediction 555 595 - -
Cpe07g01081 880 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 195 429 IPR044835 GO:0003677|GO:0006355|GO:0009725
Cpe07g01081 880 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 704 868 IPR044835 GO:0003677|GO:0006355|GO:0009725
Cpe07g01081 880 Gene3D - 126 211 IPR015300 -
Cpe07g01081 880 SUPERFAMILY DNA-binding pseudobarrel domain 118 239 IPR015300 -
Cpe07g01081 880 ProSiteProfiles PB1 domain profile. 754 841 IPR000270 GO:0005515
Cpe07g01081 880 PANTHER AUXIN RESPONSE FACTOR 19 195 429 - -
Cpe07g01081 880 PANTHER AUXIN RESPONSE FACTOR 19 704 868 - -
Cpe07g01081 880 Pfam AUX/IAA family 749 841 IPR033389 -
Cpe07g01081 880 Pfam Auxin response factor 236 318 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Cpe07g01081 880 Gene3D - 750 843 - -
Cpe07g01081 880 PANTHER AUXIN RESPONSE FACTOR 19 431 691 - -
Cpe07g01081 880 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 431 691 IPR044835 GO:0003677|GO:0006355|GO:0009725
Cpe07g01081 880 PANTHER AUXIN RESPONSE FACTOR 19 1 186 - -
Cpe07g01081 880 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 186 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Cpe07g01081 Cpe11g01202 CST
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g00768 Cpe-Chr7:6798055 Cpe07g01081 Cpe-Chr7:9561062 6.83E-30 dispersed
Cpe07g01081 Cpe-Chr7:9561062 Cpe11g00650 Cpe-Chr11:4296398 6.08E-51 dispersed
Cpe11g01202 Cpe-Chr11:9801668 Cpe07g01081 Cpe-Chr7:9561062 1.76E-70 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g01081 K14486 - aof:109844334 850.121