Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g01089 ATAACCCGAGACGATTCCGACCACGACAGCACAAGCTCCTCCCTCACCCTCCCAGACTCCACCCGCAGCTGGCTGAGCAACCTAAGCATCAGCAGTCGCCGAAGCAGCACGTCCGCCTTAGACGCCACCTTATCCCCCTACAAACCACACAAAGCAAACCACGTGGCATGGGAGGCGATGCGGTGGGTGAGACGCGTGAAAGGGCGCGTGGGGCTGGAGCACTTCCGGCTGCTACGGCGGGTGGGGAGCGGAGACATAGGGAATGTTTATTTGTGTGAAATAAGGAACCCGATGGTGGGGCTGGCGCAGTGCTATTACGCTATGAAAGTGGTGGATAGAGAAGCCGTGTCGGTGAGGAACAAAGGGAGGAGAGCGGACATGGAGAAGGAGATTCTTAAGCTCATTGATCATCCCTTTTTGCCTACGCTTTATGCCGAGTTTGAAGCTTCGCATTACTCGTGTTTGGTTATGGAGTTTTGTCCCGGCGGCGATTTGTACGCCGCCCGCCAACGCCTCCCCGGAAAACGCTTCCCCATTTCTTCTGCCAACATAACCCGAGACGATTCCGACCACGACAGCACAAGCTCCTCCCTCACCCTCCCAGACTCCACCCGCAGCTGGCTGAGCAACCTAAGCATCAGCAGTCGCCGAAGCAGCACGTCCGCCTTAGACGCCACCTTATCCCCCTACAAACCACACAAAGCAAACCACGTGGCATGGGAGGCGATGCGGTGGGTGAGACGCGTGAAAGGGCGCGTGGGGCTGGAGCACTTCCGGCTGCTACGGCGGGTGGGGAGCGGAGACATAGGGAATGTTTATTTGTGTGAAATAAGGAACCCGATGGTGGGGCTGGCGCAGTGCTATTACGCTATGAAAGTGGTGGATAGAGAAGCCGTGTCGGTGAGGAACAAAGGGAGGAGAGCGGACATGGAGAAGGAGATTCTTAAGCTCATTGATCATCCCTTTTTGCCTACGCTTTATGCCGAGTTTGAAGCTTCGCATTACTCGTGTTTGGTTATGGAGTTTTGTCCCGGCGGCGATTTATTTTATGCGGCGGAGATAATTTTAGCGTTAGAGTATTTGCATATGATGGGGATAGTTTACAGAGATTTAAAGCCGGAAAACGTGCTGGTTAGAGAAGACGGCCACATAATGCTGTCGGATTTCGATCTCTGTCTCAAATGCGACGTCGTTCCCAAGCTCATCCGTTGCAGGACCACCTCCGAACGCCACGTCACAAAAACCTACTCCACCTCATCAACTACCTCCTGCGCCGCCGCTCCAATCCACCCTGTCCTCTCCTGTTTCTCCATTACCCGCCGCCCAAACTCCACCACCATCACCACCATAACCGAACACGCCGCCGAATCCGCCGCCACTGTAGACGGCGAGTTCGACCCAGAACCGGAATTGATAGCGGAGCCGATGAATGCCCGGTCTAAATCCTTCGTTGGAACCCATGAGTATTTGGCGCCGGAGGTGATTTCCGGCCAAGGACACGGCAGCGCCGTCGATTGGTGGACGTTGGGGATTTTCCTCTATGAAATGTTGTACGGAAAAACCCCATTTAAAGGGGAAAATAACGAGAAAACCCTAATGAATATCTTGAAGCAGCCATTGACGTTTCCAAGAATTGGGGTTAGTAGCAACAAAGAGTATGAAGAAATGGTGAAAGTTGAGGATCTAATTAGGAAGCTTTTGGTGAAGAATCCCAAGAAGAGAATTGGAAGCTTAAAGGGTTCGGTTGAAATCAAAAGACATGAGTTTTTCAAAGGGGTAAATTGGGCATTAATCCGCTCCGTTCGTCCTCCGCAAGTCCCGAATTCCGATCATCTTCTTCACAAAACCCTAACCCAATCAAAATACCCGTCAAACTACGTACCCAAATTGACCAAGAAACAACGACAACAACCCTACCAAATCCCGTCTCACTATTTTGATTACTTCTAA 1950 52.05 ITRDDSDHDSTSSSLTLPDSTRSWLSNLSISSRRSSTSALDATLSPYKPHKANHVAWEAMRWVRRVKGRVGLEHFRLLRRVGSGDIGNVYLCEIRNPMVGLAQCYYAMKVVDREAVSVRNKGRRADMEKEILKLIDHPFLPTLYAEFEASHYSCLVMEFCPGGDLYAARQRLPGKRFPISSANITRDDSDHDSTSSSLTLPDSTRSWLSNLSISSRRSSTSALDATLSPYKPHKANHVAWEAMRWVRRVKGRVGLEHFRLLRRVGSGDIGNVYLCEIRNPMVGLAQCYYAMKVVDREAVSVRNKGRRADMEKEILKLIDHPFLPTLYAEFEASHYSCLVMEFCPGGDLFYAAEIILALEYLHMMGIVYRDLKPENVLVREDGHIMLSDFDLCLKCDVVPKLIRCRTTSERHVTKTYSTSSTTSCAAAPIHPVLSCFSITRRPNSTTITTITEHAAESAATVDGEFDPEPELIAEPMNARSKSFVGTHEYLAPEVISGQGHGSAVDWWTLGIFLYEMLYGKTPFKGENNEKTLMNILKQPLTFPRIGVSSNKEYEEMVKVEDLIRKLLVKNPKKRIGSLKGSVEIKRHEFFKGVNWALIRSVRPPQVPNSDHLLHKTLTQSKYPSNYVPKLTKKQRQQPYQIPSHYFDYF 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9630990 9634963 - Cp4.1LG07g11380.1 Cpe07g01089 472896
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g01089 649 Gene3D Phosphorylase Kinase; domain 1 252 349 - -
Cpe07g01089 649 ProSitePatterns Serine/Threonine protein kinases active-site signature. 366 378 IPR008271 GO:0004672|GO:0006468
Cpe07g01089 649 MobiDBLite consensus disorder prediction 183 202 - -
Cpe07g01089 649 SUPERFAMILY Protein kinase-like (PK-like) 235 616 IPR011009 -
Cpe07g01089 649 SUPERFAMILY Protein kinase-like (PK-like) 52 176 IPR011009 -
Cpe07g01089 649 Gene3D Transferase(Phosphotransferase) domain 1 477 608 - -
Cpe07g01089 649 ProSiteProfiles Protein kinase domain profile. 75 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g01089 649 SMART serkin_6 258 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g01089 649 Pfam Protein kinase domain 76 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g01089 649 Pfam Protein kinase domain 259 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g01089 649 Pfam Protein kinase domain 480 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cpe07g01089 649 PANTHER PROTEIN KINASE PINOID 2 2 183 - -
Cpe07g01089 649 PANTHER PROTEIN KINASE PINOID 2 184 649 - -
Cpe07g01089 649 PANTHER FLIPPASE KINASE 1-RELATED 184 649 - -
Cpe07g01089 649 Gene3D Transferase(Phosphotransferase) domain 1 350 456 - -
Cpe07g01089 649 PANTHER FLIPPASE KINASE 1-RELATED 2 183 - -
Cpe07g01089 649 Gene3D Phosphorylase Kinase; domain 1 67 204 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g01089 Cpe-Chr7:9630990 Cpe10g01239 Cpe-Chr10:9546367 3.40E-44 dispersed
Cpe11g01082 Cpe-Chr11:9033317 Cpe07g01089 Cpe-Chr7:9630990 2.23E-75 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
62531 PF00069 Pkinase 2.50E-24 CL0016 Cpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g01089 K08286 - csv:101202905 700.279