Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g01122 ATGGATGCCGCCAACCCCAGCAATGGCGATGAGGAATCCATTATCACTCCCTTGCTTGCTCCTCAGAGATTGCTTGTCAATTCTTCCTCACAGGTCGCCCTTGTTGGCGCTAATATCTGCCCCATTGAAAGCCTTGATTACGAGATTTTTGATAATGATTTCTTCATGCAAGATTGGAGGAGTCGTGAGGATTTTCAGATATTTCAATACTTGGTTATTAAATGGTTGTCTTGTTTCTTGATCGGTCTGATTATGGGTCTTGTTGGGTTCTTCAACAATCTGGCGGTGGAGAATATTGCAGGGAAGAAGTTTGTTGTTACTTCGAATATGATGCTTGAGGGCAGCCGGCTCAGGTATACCAGAAGTAAAGGCTTATCTGAATGGTGTGGACGCCCCAGGAATATTATCGCCCAGGACATTGTTAGTGAAGGTCAGGGGTGTTTCAAAGTATTTGGTTTAACTTGGAGATGGCTATACCATCTCAAGAAGGATCGAGATAGGCGGGATCTTGTAACATGTGGTGCTGCTGCTGGAATCGCTGCTGCTTTTCGTGCTCCCGTTGGGGGCGTGTTGTTTGCTTTTGAAGAGATGGCATCATGGTGGAGAAGCGCCCTTCTGTGGCGAGCATTTTTCACGACGGCTATCGTTGCTGTCGTATTACGCTCACTGATCGATGTTTGTTTGAATGGATTATGTGGATTGTTTGGTAAAGGGGGACTCATAATATTTGATACCTACTCAGACTTCCCCTCATATCACCTCAAAGATCTACCTCCTGTGCTTGCCCTTGCTTTCATTGGAGGCATTCTTGGAAGCTTTTATAATTTTCTTTTAACCAAAGTTCTTCGTGTTTACAATCTCATACATGAGAAAGGCATTGTTTACAAAGTTTTACTGGCTTGCTCTGTCTCGATTTTCACGTCATGTCTTCTTTTCGGATTACCGTGGTTCGCATCGTGCCAACCTTGCCCGTCAAGTGCTCGAGAAATCTGTCCTACGATAGGTCGATCGGGTAACTTCAAGAAGTTTCAGTGTTCTTCTGGTCACTACAATGATCTTGCAAGTCTTATATTTAACACCAATGATGACGCCATAAAGAACCTCTTTAGCAAAGGCACAGACTCTGAGTTTCAATTCTCATCAATGCTCACATTTTTCGTTACATGTTTTTCGTTGAGCGTTCTTAGTTACGGTACGGTTGCTCCGGTTGGCTTGTTTGTTCCTGTTATTGTGACAGGAGCTTCTTATGGTCGTTTTGTTGGAATGGTTGTCGGTCCATACACGAACCTTAGCCATGGCTTCTTTGCCATATTGGGTGCTGCTTCGTTTCTCGGGGGGTCGATGAGGACGACCGTTTCTTTATGTGTTATTATGCTCGAATTGACCAATAATTTGTTGCTGCTGCCTTTAGTAATGTTGGTTCTCCTTATTTCCAAGACTGTGGCTGATGCTTTCAACTGTAATATTTACAACCAGATCATGAAAGCCAAGGGGTTCCCTTACCTAGAAGGCCATGTTGAGCCATACATGAGGCAGCTGACTGTTGCCAGTGTGTTAACAAGTCCACTTCAATTATTCCGTGGCATCGAGAAGGTTCGTAACGTAGTAAACGTTCTCAAATGGACGAGCCATCACGGATTTCCCATCATCGATGAGCCTCCTTTCTCGGAATTCCCTGTTTTATATGGTCTAATTCTCAGAGCTCATCTCATCGTGTTGTTAAAGAAGAAAGCTTTCTTGTCGGTTCCAACACTAGGATTAGAAAGACAGGATGCCTTAAAGCTATTATCAGCTGATGATTTTGCAGTGATGGGTTCGGGCGATGTCGATCGGATTGAAGATATTCAGTTGACTGATGAAGAGATGGAGATGTTCATCGATCTACATCCATTCGCTAATACCTCGCCTTGTACTGTCTTGGAAACGATGTCATTAGCAAAGGCTTTCGCAATTTTTCGAGAAACTGGTTTAAGACACATGCTGGTGATGCCTAAGGTCCCCGGGAGATCGCCCGTGGTCGGTATATTGACTCGGCACGACTTTATGCCGGATTACATTCTGAGTTTGCATCCATTGCTAGAGAAGAGCAGATGGAAAAGGTTAAGAATCAAATTTCATCTGAAGAAAAAATTCTTCTAG 2139 43.81 MDAANPSNGDEESIITPLLAPQRLLVNSSSQVALVGANICPIESLDYEIFDNDFFMQDWRSREDFQIFQYLVIKWLSCFLIGLIMGLVGFFNNLAVENIAGKKFVVTSNMMLEGSRLRYTRSKGLSEWCGRPRNIIAQDIVSEGQGCFKVFGLTWRWLYHLKKDRDRRDLVTCGAAAGIAAAFRAPVGGVLFAFEEMASWWRSALLWRAFFTTAIVAVVLRSLIDVCLNGLCGLFGKGGLIIFDTYSDFPSYHLKDLPPVLALAFIGGILGSFYNFLLTKVLRVYNLIHEKGIVYKVLLACSVSIFTSCLLFGLPWFASCQPCPSSAREICPTIGRSGNFKKFQCSSGHYNDLASLIFNTNDDAIKNLFSKGTDSEFQFSSMLTFFVTCFSLSVLSYGTVAPVGLFVPVIVTGASYGRFVGMVVGPYTNLSHGFFAILGAASFLGGSMRTTVSLCVIMLELTNNLLLLPLVMLVLLISKTVADAFNCNIYNQIMKAKGFPYLEGHVEPYMRQLTVASVLTSPLQLFRGIEKVRNVVNVLKWTSHHGFPIIDEPPFSEFPVLYGLILRAHLIVLLKKKAFLSVPTLGLERQDALKLLSADDFAVMGSGDVDRIEDIQLTDEEMEMFIDLHPFANTSPCTVLETMSLAKAFAIFRETGLRHMLVMPKVPGRSPVVGILTRHDFMPDYILSLHPLLEKSRWKRLRIKFHLKKKFF 712
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9873077 9878245 + Cp4.1LG07g11160.1 Cpe07g01122 472929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g01122 712 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 144 704 - -
Cpe07g01122 712 ProSiteProfiles CBS domain profile. 632 692 IPR000644 -
Cpe07g01122 712 CDD CBS_pair_voltage-gated_CLC_euk_bac 514 684 - -
Cpe07g01122 712 Gene3D - 503 685 IPR046342 -
Cpe07g01122 712 SMART cbs_1 522 575 IPR000644 -
Cpe07g01122 712 SMART cbs_1 635 688 IPR000644 -
Cpe07g01122 712 Gene3D Clc chloride channel 134 502 - -
Cpe07g01122 712 PRINTS Chloride channel signature 176 195 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Cpe07g01122 712 PRINTS Chloride channel signature 451 470 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Cpe07g01122 712 PRINTS Chloride channel signature 489 503 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Cpe07g01122 712 PRINTS Chloride channel signature 401 421 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Cpe07g01122 712 PRINTS Chloride channel signature 433 449 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Cpe07g01122 712 PANTHER CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER 12 113 - -
Cpe07g01122 712 Pfam CBS domain 634 681 IPR000644 -
Cpe07g01122 712 SUPERFAMILY Clc chloride channel 52 504 IPR014743 -
Cpe07g01122 712 Pfam Voltage gated chloride channel 156 483 IPR001807 GO:0005247|GO:0006821|GO:0016020|GO:0055085
Cpe07g01122 712 PANTHER CHLORIDE CHANNEL PROTEIN 12 113 - -
Cpe07g01122 712 SUPERFAMILY CBS-domain pair 505 682 IPR046342 -
Cpe07g01122 712 PANTHER CHLORIDE CHANNEL PROTEIN 144 704 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe07g01122 Cpe-Chr7:9873077 Cpe14g00660 Cpe-Chr14:4347565 0 dispersed
Cpe07g01122 Cpe-Chr7:9873077 Cpe01g00804 Cpe-Chr1:4797320 8.82E-06 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g01122 K05016 - csv:101216071 1141.72