Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cpe07g01132 | ATGACTGTGGAGGATCGAAGAGCTAATTTGGTGGGTGAAAATGGGGTTATGGATCAGTTTCCTATTGGTATGCGTGTTCTTGCTGTGGATGATGACCCCATTTGCCTTAAGGTTTTGGAGAATTTGCTTCGTAAATGTCAATATCATGTGAATCTTGTTTATGTGTTTGAAGAACATGGTTTGATTGCAAGAACACCTTTTGTCTTGTTTTTGAAACATTTCTATCATGAACATGTTTGTCTGTCTGGAAATATTACAACGACGAATCAGGCGATTCAGGCACTTAAAATGTTGAGGGAAAACAGAAACAAGTTTGATTTGGTTATCAGTGATGTGAACATGCCAGACATGGATGGTTTTAAGCTCCTCGAGCTCGTAGGCCTTGAAATGGACCTACCCGTTATCATGCTGTCTGCGCATAGCGATACCGAGCTTGTAAAGAAGGGAGTTTTTCATGGTGCTTGTGATTATTTGCTGAAACCCGTTCGAATTGAGGAGCTGAAGAACATATGGCAACACGTCCTCCGAAGAAAGACTTCCTCAGCTAAGAACCAAAACGAGTGCACTAATGGAAATGACACTTTATGTCAAACTGTTGAAGTTGTAAAAGGTTTCCCGTCTGCGGCGAGTGCTGATAACGGGAAACCTGGTAAAAGGCGGAAAGACGACGATGACGATGAGGAAGGAGGTGAAGAAGAGAGCGCATACGAGACCGACGACTCCTCGTCCCAAAAAAAGCAAAGGGTAGTTTGGTTCGGTGAGCTGCATAGAAAGTTTATTGCAGCTGTTAATCATTTGGGCTATGAAAAGGCCGTTCCTAAAAAGATCCTCGATCTAATGAACGTCGAAGGACTCACAAGAGAAAACAAATACAGGCAGTACCTTAAAAAAATGTGTACTAAGGAAGCTCAGCAATGTAATATGATGGCTGCATTTGGAGGTAAAGACACCTCCTTCAGGCCCATGGCTTCACTCAATGGATTTTCAATGACGGGAACGGGAAGGCTCTCGAACGCTACGTTCTCGTCGTATCCCTCTCGAGGAATCGTTGGTAGATTAAACTCTACTGCTGGATTGAGCTTACACGGTATTGCTTCCTCGGGAATGATCCAACAGGGTGCTTCCCATAACTTGAGTAGCTCATTGAATATACTCGGGAAACCCCATCCGACTCTCTTGCTTTCAAACAGACCGCCGAGTATATTCAACAGTATTTCGACGCCATCAGATCACATCCAGTCGCATTGGGACAAACACAACGCACCATTTAAAGAGTCGAATTTGATAAATGATGTCTCGAGTTTTACAGTTTCCACGAGCTTCCCTGATTCTAGAGTGGCTGTTGGTTGCTCAAGCAATTTTGACTTCGGTGTTTCGAGCCATTCGTTGATGTTACAAGGACATAAGCAACAGAGTCATGGCAGCGGAGAGTTTCGAGATCAGTCTTGTTTTAAGGTATCTCCAATCAACCCGGAACCCGTAGGCTGCAGCACAGGCGTTTCTAACATTTTGGGCGGTCATGGTCAGTCGAACAAAAACTGGCAGGGTGTCTCGCTCACTGGAACTTACCCTTCTGATGGAATGCCTGCGATTAATTTGACGATTTCTTCGGCTCAGCCCGATAACGAAAACTTTCCTGTTGGTTTTCCTTCGACTAGCGTGGACTCGAGTTCTCAGCTTGATTTAAGAGGGGAGACGCAATGCTACGACGAACTAATGGATCGGGTTGTCGATGCCATGAATGACAGATCAAAGCAACAATGGGAAACAGCTAAACAGAATTACTATGGCAACCATAGTTCTATATTGAGAAACTCTCTTGTTTCTGGGAATAGTGTTGCAGATCCCTTGGACCCGAGTTCAGCAGATCCGAACAATGCGATCTGTCTCGAAAACATCGGTAGCTCTTTGACTAACCAGTTGAATAACGACGCTCCCGCCTTCATTCAGCAAGACGCAGAAACGTTGATGATGGAGACTTGGATGAACTTCGACGGAAAAAGTCTCATGGATCCAACAAAGCTACACTATAGTTTTAGTTCCCTGGACGAGTAG | 2055 | 44.48 | MTVEDRRANLVGENGVMDQFPIGMRVLAVDDDPICLKVLENLLRKCQYHVNLVYVFEEHGLIARTPFVLFLKHFYHEHVCLSGNITTTNQAIQALKMLRENRNKFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLRRKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAYETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENKYRQYLKKMCTKEAQQCNMMAAFGGKDTSFRPMASLNGFSMTGTGRLSNATFSSYPSRGIVGRLNSTAGLSLHGIASSGMIQQGASHNLSSSLNILGKPHPTLLLSNRPPSIFNSISTPSDHIQSHWDKHNAPFKESNLINDVSSFTVSTSFPDSRVAVGCSSNFDFGVSSHSLMLQGHKQQSHGSGEFRDQSCFKVSPINPEPVGCSTGVSNILGGHGQSNKNWQGVSLTGTYPSDGMPAINLTISSAQPDNENFPVGFPSTSVDSSSQLDLRGETQCYDELMDRVVDAMNDRSKQQWETAKQNYYGNHSSILRNSLVSGNSVADPLDPSSADPNNAICLENIGSSLTNQLNNDAPAFIQQDAETLMMETWMNFDGKSLMDPTKLHYSFSSLDE | 684 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 9932833 | 9938247 | - | Cp4.1LG07g11090.1 | Cpe07g01132 | 472939 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cpe07g01132 | 684 | SMART | REC_2 | 51 | 171 | IPR001789 | GO:0000160 | |
Cpe07g01132 | 684 | SUPERFAMILY | CheY-like | 85 | 185 | IPR011006 | - | |
Cpe07g01132 | 684 | TIGRFAM | myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class | 246 | 289 | IPR006447 | GO:0003677 | |
Cpe07g01132 | 684 | Gene3D | - | 242 | 299 | - | - | |
Cpe07g01132 | 684 | SUPERFAMILY | Homeodomain-like | 244 | 297 | IPR009057 | - | |
Cpe07g01132 | 684 | CDD | REC_typeB_ARR-like | 26 | 175 | - | - | |
Cpe07g01132 | 684 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 84 | 683 | - | - | |
Cpe07g01132 | 684 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 1 | 50 | IPR045279 | GO:0009736 | |
Cpe07g01132 | 684 | Gene3D | - | 24 | 201 | - | - | |
Cpe07g01132 | 684 | ProSiteProfiles | Response regulatory domain profile. | 25 | 175 | IPR001789 | GO:0000160 | |
Cpe07g01132 | 684 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 1 | 50 | - | - | |
Cpe07g01132 | 684 | PIRSF | RR_ARR_type-B | 81 | 672 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 | |
Cpe07g01132 | 684 | PIRSF | RR_ARR_type-B | 1 | 54 | IPR017053 | GO:0003677|GO:0003700|GO:0009736 | |
Cpe07g01132 | 684 | PANTHER | TWO-COMPONENT RESPONSE REGULATOR | 84 | 683 | IPR045279 | GO:0009736 | |
Cpe07g01132 | 684 | MobiDBLite | consensus disorder prediction | 207 | 242 | - | - | |
Cpe07g01132 | 684 | Pfam | Response regulator receiver domain | 84 | 169 | IPR001789 | GO:0000160 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cpe01g01323 | Cpe-Chr1:7967263 | Cpe07g01132 | Cpe-Chr7:9932833 | 6.68E-06 | dispersed | |
Cpe06g00305 | Cpe-Chr6:1686684 | Cpe07g01132 | Cpe-Chr7:9932833 | 2.04E-112 | dispersed | |
Cpe07g01132 | Cpe-Chr7:9932833 | Cpe08g00165 | Cpe-Chr8:1065824 | 3.61E-81 | dispersed | |
Cpe18g00551 | Cpe-Chr18:6077369 | Cpe07g01132 | Cpe-Chr7:9932833 | 1.85E-107 | wgd | |
Cpe04g01239 | Cpe-Chr4:10362146 | Cpe07g01132 | Cpe-Chr7:9932833 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
49803 | PF00072 | Response_reg | 1.10E-17 | CL0304 | Cpe | TR |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cpe07g01132 | K14491 | - | mcha:111013065 | 902.894 |