Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cpe07g01132 ATGACTGTGGAGGATCGAAGAGCTAATTTGGTGGGTGAAAATGGGGTTATGGATCAGTTTCCTATTGGTATGCGTGTTCTTGCTGTGGATGATGACCCCATTTGCCTTAAGGTTTTGGAGAATTTGCTTCGTAAATGTCAATATCATGTGAATCTTGTTTATGTGTTTGAAGAACATGGTTTGATTGCAAGAACACCTTTTGTCTTGTTTTTGAAACATTTCTATCATGAACATGTTTGTCTGTCTGGAAATATTACAACGACGAATCAGGCGATTCAGGCACTTAAAATGTTGAGGGAAAACAGAAACAAGTTTGATTTGGTTATCAGTGATGTGAACATGCCAGACATGGATGGTTTTAAGCTCCTCGAGCTCGTAGGCCTTGAAATGGACCTACCCGTTATCATGCTGTCTGCGCATAGCGATACCGAGCTTGTAAAGAAGGGAGTTTTTCATGGTGCTTGTGATTATTTGCTGAAACCCGTTCGAATTGAGGAGCTGAAGAACATATGGCAACACGTCCTCCGAAGAAAGACTTCCTCAGCTAAGAACCAAAACGAGTGCACTAATGGAAATGACACTTTATGTCAAACTGTTGAAGTTGTAAAAGGTTTCCCGTCTGCGGCGAGTGCTGATAACGGGAAACCTGGTAAAAGGCGGAAAGACGACGATGACGATGAGGAAGGAGGTGAAGAAGAGAGCGCATACGAGACCGACGACTCCTCGTCCCAAAAAAAGCAAAGGGTAGTTTGGTTCGGTGAGCTGCATAGAAAGTTTATTGCAGCTGTTAATCATTTGGGCTATGAAAAGGCCGTTCCTAAAAAGATCCTCGATCTAATGAACGTCGAAGGACTCACAAGAGAAAACAAATACAGGCAGTACCTTAAAAAAATGTGTACTAAGGAAGCTCAGCAATGTAATATGATGGCTGCATTTGGAGGTAAAGACACCTCCTTCAGGCCCATGGCTTCACTCAATGGATTTTCAATGACGGGAACGGGAAGGCTCTCGAACGCTACGTTCTCGTCGTATCCCTCTCGAGGAATCGTTGGTAGATTAAACTCTACTGCTGGATTGAGCTTACACGGTATTGCTTCCTCGGGAATGATCCAACAGGGTGCTTCCCATAACTTGAGTAGCTCATTGAATATACTCGGGAAACCCCATCCGACTCTCTTGCTTTCAAACAGACCGCCGAGTATATTCAACAGTATTTCGACGCCATCAGATCACATCCAGTCGCATTGGGACAAACACAACGCACCATTTAAAGAGTCGAATTTGATAAATGATGTCTCGAGTTTTACAGTTTCCACGAGCTTCCCTGATTCTAGAGTGGCTGTTGGTTGCTCAAGCAATTTTGACTTCGGTGTTTCGAGCCATTCGTTGATGTTACAAGGACATAAGCAACAGAGTCATGGCAGCGGAGAGTTTCGAGATCAGTCTTGTTTTAAGGTATCTCCAATCAACCCGGAACCCGTAGGCTGCAGCACAGGCGTTTCTAACATTTTGGGCGGTCATGGTCAGTCGAACAAAAACTGGCAGGGTGTCTCGCTCACTGGAACTTACCCTTCTGATGGAATGCCTGCGATTAATTTGACGATTTCTTCGGCTCAGCCCGATAACGAAAACTTTCCTGTTGGTTTTCCTTCGACTAGCGTGGACTCGAGTTCTCAGCTTGATTTAAGAGGGGAGACGCAATGCTACGACGAACTAATGGATCGGGTTGTCGATGCCATGAATGACAGATCAAAGCAACAATGGGAAACAGCTAAACAGAATTACTATGGCAACCATAGTTCTATATTGAGAAACTCTCTTGTTTCTGGGAATAGTGTTGCAGATCCCTTGGACCCGAGTTCAGCAGATCCGAACAATGCGATCTGTCTCGAAAACATCGGTAGCTCTTTGACTAACCAGTTGAATAACGACGCTCCCGCCTTCATTCAGCAAGACGCAGAAACGTTGATGATGGAGACTTGGATGAACTTCGACGGAAAAAGTCTCATGGATCCAACAAAGCTACACTATAGTTTTAGTTCCCTGGACGAGTAG 2055 44.48 MTVEDRRANLVGENGVMDQFPIGMRVLAVDDDPICLKVLENLLRKCQYHVNLVYVFEEHGLIARTPFVLFLKHFYHEHVCLSGNITTTNQAIQALKMLRENRNKFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTELVKKGVFHGACDYLLKPVRIEELKNIWQHVLRRKTSSAKNQNECTNGNDTLCQTVEVVKGFPSAASADNGKPGKRRKDDDDDEEGGEEESAYETDDSSSQKKQRVVWFGELHRKFIAAVNHLGYEKAVPKKILDLMNVEGLTRENKYRQYLKKMCTKEAQQCNMMAAFGGKDTSFRPMASLNGFSMTGTGRLSNATFSSYPSRGIVGRLNSTAGLSLHGIASSGMIQQGASHNLSSSLNILGKPHPTLLLSNRPPSIFNSISTPSDHIQSHWDKHNAPFKESNLINDVSSFTVSTSFPDSRVAVGCSSNFDFGVSSHSLMLQGHKQQSHGSGEFRDQSCFKVSPINPEPVGCSTGVSNILGGHGQSNKNWQGVSLTGTYPSDGMPAINLTISSAQPDNENFPVGFPSTSVDSSSQLDLRGETQCYDELMDRVVDAMNDRSKQQWETAKQNYYGNHSSILRNSLVSGNSVADPLDPSSADPNNAICLENIGSSLTNQLNNDAPAFIQQDAETLMMETWMNFDGKSLMDPTKLHYSFSSLDE 684
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 9932833 9938247 - Cp4.1LG07g11090.1 Cpe07g01132 472939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cpe07g01132 684 SMART REC_2 51 171 IPR001789 GO:0000160
Cpe07g01132 684 SUPERFAMILY CheY-like 85 185 IPR011006 -
Cpe07g01132 684 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 246 289 IPR006447 GO:0003677
Cpe07g01132 684 Gene3D - 242 299 - -
Cpe07g01132 684 SUPERFAMILY Homeodomain-like 244 297 IPR009057 -
Cpe07g01132 684 CDD REC_typeB_ARR-like 26 175 - -
Cpe07g01132 684 PANTHER TWO-COMPONENT RESPONSE REGULATOR 84 683 - -
Cpe07g01132 684 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 50 IPR045279 GO:0009736
Cpe07g01132 684 Gene3D - 24 201 - -
Cpe07g01132 684 ProSiteProfiles Response regulatory domain profile. 25 175 IPR001789 GO:0000160
Cpe07g01132 684 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 50 - -
Cpe07g01132 684 PIRSF RR_ARR_type-B 81 672 IPR017053 GO:0003677|GO:0003700|GO:0009736
Cpe07g01132 684 PIRSF RR_ARR_type-B 1 54 IPR017053 GO:0003677|GO:0003700|GO:0009736
Cpe07g01132 684 PANTHER TWO-COMPONENT RESPONSE REGULATOR 84 683 IPR045279 GO:0009736
Cpe07g01132 684 MobiDBLite consensus disorder prediction 207 242 - -
Cpe07g01132 684 Pfam Response regulator receiver domain 84 169 IPR001789 GO:0000160
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cpe01g01323 Cpe-Chr1:7967263 Cpe07g01132 Cpe-Chr7:9932833 6.68E-06 dispersed
Cpe06g00305 Cpe-Chr6:1686684 Cpe07g01132 Cpe-Chr7:9932833 2.04E-112 dispersed
Cpe07g01132 Cpe-Chr7:9932833 Cpe08g00165 Cpe-Chr8:1065824 3.61E-81 dispersed
Cpe18g00551 Cpe-Chr18:6077369 Cpe07g01132 Cpe-Chr7:9932833 1.85E-107 wgd
Cpe04g01239 Cpe-Chr4:10362146 Cpe07g01132 Cpe-Chr7:9932833 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
49803 PF00072 Response_reg 1.10E-17 CL0304 Cpe TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cpe07g01132 K14491 - mcha:111013065 902.894